RNA–Protein interactions for RNA: ENST00000366576.3

MTR-201, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 1 (best)

Gene MTR, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-201ENST00000366576 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
MTR-201ENST00000366576 MCM3P25205 808 aa12.51□□□□□ -0.41
MTR-201ENST00000366576 MATR3P43243 847 aaKnown RBP eCLIP12.51□□□□□ -0.415e-6■□□□□ 9.3
MTR-201ENST00000366576 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
MTR-201ENST00000366576 URI1O94763 535 aaPredicted RBP12.51□□□□□ -0.41
MTR-201ENST00000366576 PAFAH1B1P43034 410 aa12.51□□□□□ -0.41
MTR-201ENST00000366576 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
MTR-201ENST00000366576 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
MTR-201ENST00000366576 CCDC8Q9H0W5 538 aaPredicted RBP12.51□□□□□ -0.41
MTR-201ENST00000366576 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
MTR-201ENST00000366576 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 CCDC194A0A1B0GVG4 234 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 F6X3S4 739 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 RANBP6O60518 1105 aaKnown RBP12.5□□□□□ -0.41
MTR-201ENST00000366576 NEBLO76041 1014 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 SLC5A1P13866 664 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 BMP2KLQ5H9B9 411 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 EVI5LQ96CN4 794 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 DNAI2Q9GZS0 605 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 CCDC141Q6ZP82 1450 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
MTR-201ENST00000366576 DHX29Q7Z478 1369 aaKnown RBP12.5□□□□□ -0.41
MTR-201ENST00000366576 USO1O60763 962 aaKnown RBP12.5□□□□□ -0.41
MTR-201ENST00000366576 CAVIN2O95810 425 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 TAF3Q5VWG9 929 aa12.5□□□□□ -0.41
MTR-201ENST00000366576 TIAM1Q13009 1591 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 A0A087WZG4 1122 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 ZPR1O75312 459 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 FLIIQ13045 1269 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 C20orf194Q5TEA3 1177 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 CNNM3Q8NE01 707 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 INCENPQ9NQS7 918 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 HECW1Q76N89 1606 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 IFIT3O14879 490 aaKnown RBP12.49□□□□□ -0.41
MTR-201ENST00000366576 TBC1D2Q9BYX2 928 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 TRIM27P14373 513 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 NME9Q86XW9 330 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 CLIP2Q9UDT6 1046 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
MTR-201ENST00000366576 WDR97A6NE52 1622 aa12.49□□□□□ -0.41
MTR-201ENST00000366576 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 GSDMDP57764 484 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 SLF2Q8IX21 1173 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 CCDC82Q8N4S0 544 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 GOLGA8BA8MQT2 603 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 GUCY1B3Q02153 619 aa12.48□□□□□ -0.41
MTR-201ENST00000366576 YEATS4O95619 227 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 SSFA2P28290 1259 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
MTR-201ENST00000366576 CATIPQ7Z7H3 387 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 FSIP1Q8NA03 581 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
MTR-201ENST00000366576 SHTN1A0MZ66 631 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 NLRP5P59047 1200 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 PYM1Q9BRP8 204 aaKnown RBP12.47□□□□□ -0.41
MTR-201ENST00000366576 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
MTR-201ENST00000366576 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
MTR-201ENST00000366576 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
MTR-201ENST00000366576 CETN1Q12798 172 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 MPRIPQ6WCQ1 1025 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 CCDC91Q7Z6B0 441 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 CKAP2LQ8IYA6 745 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 CCDC12Q8WUD4 166 aaPredicted RBP12.46□□□□□ -0.41
MTR-201ENST00000366576 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 STX6O43752 255 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
MTR-201ENST00000366576 TCP11L1Q9NUJ3 509 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 TTC21BQ7Z4L5 1316 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 LDHCP07864 332 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 CASQ1P31415 396 aa12.46□□□□□ -0.41
MTR-201ENST00000366576 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
MTR-201ENST00000366576 GSTTP1A0A1W2PQM5 241 aa12.46□□□□□ -0.42
MTR-201ENST00000366576 MCM5P33992 734 aa12.46□□□□□ -0.42
MTR-201ENST00000366576 TDRD12Q587J7 1177 aaKnown RBP12.46□□□□□ -0.42
MTR-201ENST00000366576 CUL5Q93034 780 aa12.46□□□□□ -0.42
MTR-201ENST00000366576 HMG20BQ9P0W2 317 aa12.46□□□□□ -0.42
MTR-201ENST00000366576 GOLGA6L9A6NEM1 432 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 TNNT1P13805 278 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 ZNF165P49910 485 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 AMPD3Q01432 767 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
MTR-201ENST00000366576 UBA5Q9GZZ9 404 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 FOXO3O43524 673 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 KIF5BP33176 963 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 CCDC96Q2M329 555 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 USP16Q9Y5T5 823 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 LDHAL6AQ6ZMR3 332 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 NSD2O96028 1365 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 MAP2K1Q02750 393 aaPredicted RBP12.45□□□□□ -0.42
MTR-201ENST00000366576 KANK3Q6NY19 840 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 TFIP11Q9UBB9 837 aaKnown RBP12.45□□□□□ -0.42
MTR-201ENST00000366576 UBA7P41226 1012 aa12.45□□□□□ -0.42
MTR-201ENST00000366576 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms