RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
TNFRSF1A-202ENST00000366159 N4BP2Q86UW6 1770 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-202ENST00000366159 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-202ENST00000366159 KCNQ3O43525 872 aa18.25■□□□□ 0.51
TNFRSF1A-202ENST00000366159 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-202ENST00000366159 KCNA3P22001 575 aa18.25■□□□□ 0.51
TNFRSF1A-202ENST00000366159 EIF5P55010 431 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-202ENST00000366159 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
TNFRSF1A-202ENST00000366159 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
TNFRSF1A-202ENST00000366159 PLEKHF1Q96S99 279 aa18.24■□□□□ 0.51
TNFRSF1A-202ENST00000366159 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1A-202ENST00000366159 BRCA1P38398 1863 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-202ENST00000366159 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 ZPR1O75312 459 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 STARD3NLO95772 234 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 MCM10Q7L590 875 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 FMNL2Q96PY5 1086 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 ADCY9O60503 1353 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 NRXN2Q9P2S2 1712 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 DPEP1P16444 411 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 WWC3Q9ULE0 1092 aa18.23■□□□□ 0.51
TNFRSF1A-202ENST00000366159 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-202ENST00000366159 DCTN1Q14203 1278 aa18.22■□□□□ 0.51
TNFRSF1A-202ENST00000366159 NFIXQ14938 502 aa18.22■□□□□ 0.51
TNFRSF1A-202ENST00000366159 RALBP1Q15311 655 aa18.21■□□□□ 0.51
TNFRSF1A-202ENST00000366159 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1A-202ENST00000366159 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-202ENST00000366159 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-202ENST00000366159 DLG5Q8TDM6 1919 aa18.19■□□□□ 0.5
TNFRSF1A-202ENST00000366159 A0A087WZG4 1122 aa18.19■□□□□ 0.5
TNFRSF1A-202ENST00000366159 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
TNFRSF1A-202ENST00000366159 PRAMEF22A3QJZ6 481 aa18.18■□□□□ 0.5
TNFRSF1A-202ENST00000366159 A1BGP04217 495 aa18.18■□□□□ 0.5
TNFRSF1A-202ENST00000366159 DDX10Q13206 875 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-202ENST00000366159 SCN7AQ01118 1682 aa18.17■□□□□ 0.5
TNFRSF1A-202ENST00000366159 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-202ENST00000366159 BCS1LQ9Y276 419 aa18.17■□□□□ 0.5
TNFRSF1A-202ENST00000366159 ATP10DQ9P241 1426 aa18.17■□□□□ 0.5
TNFRSF1A-202ENST00000366159 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
TNFRSF1A-202ENST00000366159 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
TNFRSF1A-202ENST00000366159 PIM2Q9P1W9 311 aa18.16■□□□□ 0.5
TNFRSF1A-202ENST00000366159 SERPINB2P05120 415 aa18.15■□□□□ 0.5
TNFRSF1A-202ENST00000366159 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-202ENST00000366159 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
TNFRSF1A-202ENST00000366159 CHRNA5P30532 468 aa18.14■□□□□ 0.49
TNFRSF1A-202ENST00000366159 C1QTNF8P60827 252 aa18.14■□□□□ 0.49
TNFRSF1A-202ENST00000366159 TBC1D9BQ66K14 1250 aa18.14■□□□□ 0.49
TNFRSF1A-202ENST00000366159 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
TNFRSF1A-202ENST00000366159 CAMTA2O94983 1202 aa18.13■□□□□ 0.49
TNFRSF1A-202ENST00000366159 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-202ENST00000366159 MIS18AQ9NYP9 233 aa18.13■□□□□ 0.49
TNFRSF1A-202ENST00000366159 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
TNFRSF1A-202ENST00000366159 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
TNFRSF1A-202ENST00000366159 NEFMP07197 916 aa18.12■□□□□ 0.49
TNFRSF1A-202ENST00000366159 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-202ENST00000366159 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
TNFRSF1A-202ENST00000366159 DLEC1Q9Y238 1755 aa18.12■□□□□ 0.49
TNFRSF1A-202ENST00000366159 CARMIL3Q8ND23 1372 aa18.11■□□□□ 0.49
TNFRSF1A-202ENST00000366159 MYBBP1AQ9BQG0 1328 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-202ENST00000366159 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-202ENST00000366159 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-202ENST00000366159 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-202ENST00000366159 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
TNFRSF1A-202ENST00000366159 BICDL1Q6ZP65 573 aa18.1■□□□□ 0.49
TNFRSF1A-202ENST00000366159 ARHGAP27Q6ZUM4 889 aa18.1■□□□□ 0.49
TNFRSF1A-202ENST00000366159 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
TNFRSF1A-202ENST00000366159 ANKRD31Q8N7Z5 1873 aa18.09■□□□□ 0.49
TNFRSF1A-202ENST00000366159 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
TNFRSF1A-202ENST00000366159 ZNF330Q9Y3S2 320 aaPredicted RBP18.09■□□□□ 0.49
TNFRSF1A-202ENST00000366159 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
TNFRSF1A-202ENST00000366159 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
TNFRSF1A-202ENST00000366159 RGL2O15211 777 aa18.08■□□□□ 0.49
TNFRSF1A-202ENST00000366159 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.49
TNFRSF1A-202ENST00000366159 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.49
TNFRSF1A-202ENST00000366159 CLEC4GQ6UXB4 293 aa18.08■□□□□ 0.49
TNFRSF1A-202ENST00000366159 BRIP1Q9BX63 1249 aa18.07■□□□□ 0.48
TNFRSF1A-202ENST00000366159 GPBP1L1Q9HC44 474 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-202ENST00000366159 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-202ENST00000366159 RIPK4P57078 832 aa18.05■□□□□ 0.48
TNFRSF1A-202ENST00000366159 NPM2Q86SE8 214 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-202ENST00000366159 C2CD5Q86YS7 1000 aa18.05■□□□□ 0.48
TNFRSF1A-202ENST00000366159 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
TNFRSF1A-202ENST00000366159 PRKRIP1Q9H875 184 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF1A-202ENST00000366159 H0YIN7 160 aa18.04■□□□□ 0.48
TNFRSF1A-202ENST00000366159 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
TNFRSF1A-202ENST00000366159 SBF1O95248 1867 aa18.04■□□□□ 0.48
TNFRSF1A-202ENST00000366159 KIF3CO14782 793 aa18.03■□□□□ 0.48
TNFRSF1A-202ENST00000366159 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
TNFRSF1A-202ENST00000366159 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-202ENST00000366159 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
TNFRSF1A-202ENST00000366159 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1A-202ENST00000366159 PDE6BP35913 854 aa18.02■□□□□ 0.48
TNFRSF1A-202ENST00000366159 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
TNFRSF1A-202ENST00000366159 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
TNFRSF1A-202ENST00000366159 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
TNFRSF1A-202ENST00000366159 CEP350Q5VT06 3117 aa18.02■□□□□ 0.47
TNFRSF1A-202ENST00000366159 HLFQ16534 295 aa18.01■□□□□ 0.47
TNFRSF1A-202ENST00000366159 CNBD1Q8NA66 436 aa18.01■□□□□ 0.47
TNFRSF1A-202ENST00000366159 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
TNFRSF1A-202ENST00000366159 PRELPP51888 382 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms