RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 BEND3Q5T5X7 828 aa14.32□□□□□ -0.12
CHAMP1-201ENST00000361283 ZNF496Q96IT1 587 aaPredicted RBP14.32□□□□□ -0.12
CHAMP1-201ENST00000361283 SRCIN1Q9C0H9 1055 aa14.32□□□□□ -0.12
CHAMP1-201ENST00000361283 KSR2Q6VAB6 950 aa14.31□□□□□ -0.12
CHAMP1-201ENST00000361283 CDCA7Q9BWT1 371 aaPredicted RBP14.31□□□□□ -0.12
CHAMP1-201ENST00000361283 USP44Q9H0E7 712 aa14.31□□□□□ -0.12
CHAMP1-201ENST00000361283 ALDH1L1O75891 902 aa14.31□□□□□ -0.12
CHAMP1-201ENST00000361283 THRAP3Q9Y2W1 955 aaKnown RBP14.31□□□□□ -0.12
CHAMP1-201ENST00000361283 PRAMEF22A3QJZ6 481 aa14.3□□□□□ -0.12
CHAMP1-201ENST00000361283 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
CHAMP1-201ENST00000361283 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
CHAMP1-201ENST00000361283 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
CHAMP1-201ENST00000361283 SLIT2O94813 1529 aa14.3□□□□□ -0.12
CHAMP1-201ENST00000361283 PROSER3Q2NL68 480 aa14.29□□□□□ -0.12
CHAMP1-201ENST00000361283 ANKRD45Q5TZF3 282 aa14.29□□□□□ -0.12
CHAMP1-201ENST00000361283 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
CHAMP1-201ENST00000361283 LRP10Q7Z4F1 713 aa14.29□□□□□ -0.12
CHAMP1-201ENST00000361283 ITGB4P16144 1822 aa14.29□□□□□ -0.12
CHAMP1-201ENST00000361283 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
CHAMP1-201ENST00000361283 LNPKQ9C0E8 428 aa14.28□□□□□ -0.12
CHAMP1-201ENST00000361283 HDAC5Q9UQL6 1122 aa14.28□□□□□ -0.12
CHAMP1-201ENST00000361283 BMP2KLQ5H9B9 411 aa14.27□□□□□ -0.12
CHAMP1-201ENST00000361283 UTYO14607 1347 aa14.27□□□□□ -0.12
CHAMP1-201ENST00000361283 MAP3K2Q9Y2U5 619 aa14.27□□□□□ -0.13
CHAMP1-201ENST00000361283 DDX54Q8TDD1 881 aaKnown RBP14.27□□□□□ -0.13
CHAMP1-201ENST00000361283 SPATA31A1Q5TZJ5 1347 aa14.26□□□□□ -0.13
CHAMP1-201ENST00000361283 ANXA1P04083 346 aa14.26□□□□□ -0.13
CHAMP1-201ENST00000361283 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
CHAMP1-201ENST00000361283 IPO9Q96P70 1041 aaKnown RBP14.26□□□□□ -0.13
CHAMP1-201ENST00000361283 ARFGEF2Q9Y6D5 1785 aa14.26□□□□□ -0.13
CHAMP1-201ENST00000361283 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 LRRFIP2Q9Y608 721 aaKnown RBP14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 SSH3Q8TE77 659 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 NUP188Q5SRE5 1749 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 JCADQ9P266 1359 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 MTX1Q13505 466 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 POLA2Q14181 598 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 TMOD3Q9NYL9 352 aa14.25□□□□□ -0.13
CHAMP1-201ENST00000361283 BCL9O00512 1426 aa14.24□□□□□ -0.13
CHAMP1-201ENST00000361283 SPATA31A5Q5VU36 1347 aa14.24□□□□□ -0.13
CHAMP1-201ENST00000361283 SPATA31A7Q8IWB4 1347 aa14.24□□□□□ -0.13
CHAMP1-201ENST00000361283 UBAP1LF5GYI3 381 aa14.24□□□□□ -0.13
CHAMP1-201ENST00000361283 BARGINQ6ZT62 677 aa14.24□□□□□ -0.13
CHAMP1-201ENST00000361283 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
CHAMP1-201ENST00000361283 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
CHAMP1-201ENST00000361283 EXOC5O00471 708 aa14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 COL15A1P39059 1388 aa14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 PLEKHM2Q8IWE5 1019 aa14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 DDRGK1Q96HY6 314 aa14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 METTL22Q9BUU2 404 aaPredicted RBP14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 TEX13AQ9BXU3 409 aaPredicted RBP14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 CICQ96RK0 1608 aaPredicted RBP14.23□□□□□ -0.13
CHAMP1-201ENST00000361283 DOT1LQ8TEK3 1739 aa14.22□□□□□ -0.13
CHAMP1-201ENST00000361283 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
CHAMP1-201ENST00000361283 NBPF7P0C2Y1 421 aaPredicted RBP14.22□□□□□ -0.13
CHAMP1-201ENST00000361283 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
CHAMP1-201ENST00000361283 ADAMTS2O95450 1211 aa14.22□□□□□ -0.13
CHAMP1-201ENST00000361283 MSH5O43196 834 aa14.21□□□□□ -0.13
CHAMP1-201ENST00000361283 NEXNQ0ZGT2 675 aa14.21□□□□□ -0.13
CHAMP1-201ENST00000361283 RIC3Q7Z5B4 369 aa14.21□□□□□ -0.13
CHAMP1-201ENST00000361283 OSBPL3Q9H4L5 887 aa14.21□□□□□ -0.13
CHAMP1-201ENST00000361283 RAB11FIP3O75154 756 aa14.21□□□□□ -0.13
CHAMP1-201ENST00000361283 ANKRD13DQ6ZTN6 518 aa14.21□□□□□ -0.13
CHAMP1-201ENST00000361283 MYL6BP14649 208 aa14.21□□□□□ -0.14
CHAMP1-201ENST00000361283 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.14
CHAMP1-201ENST00000361283 PIGBQ92521 554 aa14.21□□□□□ -0.14
CHAMP1-201ENST00000361283 AFDNP55196 1824 aaKnown RBP14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 GRM8O00222 908 aa14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 SPATA31A6Q5VVP1 1343 aa14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 EIF5BO60841 1220 aaKnown RBP14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 UPF2Q9HAU5 1272 aaKnown RBP14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 NEURL1BA8MQ27 555 aa14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 IGKV5-2P06315 115 aa14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 LRRCC1Q9C099 1032 aa14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 TUBGCP6Q96RT7 1819 aa14.2□□□□□ -0.14
CHAMP1-201ENST00000361283 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 SEC24BO95487 1268 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 AIMP1Q12904 312 aaKnown RBP14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 PPP1R42Q7Z4L9 355 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 SALL3Q9BXA9 1300 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 TTC22Q5TAA0 569 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 HSP90AB4PQ58FF6 505 aa14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 NOP58Q9Y2X3 529 aaKnown RBP14.19□□□□□ -0.14
CHAMP1-201ENST00000361283 CWF19L2Q2TBE0 894 aaKnown RBP14.18□□□□□ -0.14
CHAMP1-201ENST00000361283 TJP1Q07157 1748 aa14.18□□□□□ -0.14
CHAMP1-201ENST00000361283 GCKRQ14397 625 aa14.18□□□□□ -0.14
CHAMP1-201ENST00000361283 UNC5CLQ8IV45 518 aa14.18□□□□□ -0.14
CHAMP1-201ENST00000361283 BCL9LQ86UU0 1499 aa14.18□□□□□ -0.14
CHAMP1-201ENST00000361283 TBC1D32Q96NH3 1257 aa14.18□□□□□ -0.14
CHAMP1-201ENST00000361283 AOX1Q06278 1338 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms