RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 CC2D1BQ5T0F9 858 aaKnown RBP20.38■□□□□ 0.85
GDPD3-201ENST00000360688 C9orf131Q5VYM1 1079 aa20.38■□□□□ 0.85
GDPD3-201ENST00000360688 TOMM70O94826 608 aa20.37■□□□□ 0.85
GDPD3-201ENST00000360688 NMRK2Q9NPI5 230 aa20.37■□□□□ 0.85
GDPD3-201ENST00000360688 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
GDPD3-201ENST00000360688 NRXN2Q9P2S2 1712 aa20.36■□□□□ 0.85
GDPD3-201ENST00000360688 COL15A1P39059 1388 aa20.36■□□□□ 0.85
GDPD3-201ENST00000360688 NARFQ9UHQ1 456 aa20.36■□□□□ 0.85
GDPD3-201ENST00000360688 NFIXQ14938 502 aa20.35■□□□□ 0.85
GDPD3-201ENST00000360688 VSIG10Q8N0Z9 540 aa20.35■□□□□ 0.85
GDPD3-201ENST00000360688 COL3A1P02461 1466 aaPredicted RBP20.35■□□□□ 0.85
GDPD3-201ENST00000360688 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
GDPD3-201ENST00000360688 BCL2L12Q9HB09 334 aa20.33■□□□□ 0.85
GDPD3-201ENST00000360688 APLP1P51693 650 aa20.32■□□□□ 0.84
GDPD3-201ENST00000360688 DLEC1Q9Y238 1755 aa20.32■□□□□ 0.84
GDPD3-201ENST00000360688 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
GDPD3-201ENST00000360688 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
GDPD3-201ENST00000360688 RNF181Q9P0P0 153 aa20.31■□□□□ 0.84
GDPD3-201ENST00000360688 SERPINB2P05120 415 aa20.3■□□□□ 0.84
GDPD3-201ENST00000360688 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
GDPD3-201ENST00000360688 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
GDPD3-201ENST00000360688 CNGB1Q14028 1251 aaPredicted RBP20.29■□□□□ 0.84
GDPD3-201ENST00000360688 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
GDPD3-201ENST00000360688 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
GDPD3-201ENST00000360688 RBM46Q8TBY0 533 aaKnown RBP20.29■□□□□ 0.84
GDPD3-201ENST00000360688 STARD3NLO95772 234 aa20.28■□□□□ 0.84
GDPD3-201ENST00000360688 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
GDPD3-201ENST00000360688 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
GDPD3-201ENST00000360688 KDM2BQ8NHM5 1336 aa20.28■□□□□ 0.84
GDPD3-201ENST00000360688 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
GDPD3-201ENST00000360688 GNAT3A8MTJ3 354 aa20.27■□□□□ 0.84
GDPD3-201ENST00000360688 TEFQ10587 303 aa20.27■□□□□ 0.84
GDPD3-201ENST00000360688 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.84
GDPD3-201ENST00000360688 ZNF496Q96IT1 587 aaPredicted RBP20.27■□□□□ 0.84
GDPD3-201ENST00000360688 WDR90Q96KV7 1748 aa20.27■□□□□ 0.84
GDPD3-201ENST00000360688 RASSF7Q02833 373 aa20.27■□□□□ 0.83
GDPD3-201ENST00000360688 ZNF790Q6PG37 636 aa20.27■□□□□ 0.83
GDPD3-201ENST00000360688 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.83
GDPD3-201ENST00000360688 DNAJC5GQ8N7S2 189 aa20.27■□□□□ 0.83
GDPD3-201ENST00000360688 CARMIL3Q8ND23 1372 aa20.26■□□□□ 0.83
GDPD3-201ENST00000360688 HEG1Q9ULI3 1381 aa20.26■□□□□ 0.83
GDPD3-201ENST00000360688 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
GDPD3-201ENST00000360688 ANKRD31Q8N7Z5 1873 aa20.25■□□□□ 0.83
GDPD3-201ENST00000360688 A0A087WZG4 1122 aa20.25■□□□□ 0.83
GDPD3-201ENST00000360688 BICDL1Q6ZP65 573 aa20.25■□□□□ 0.83
GDPD3-201ENST00000360688 RRAGCQ9HB90 399 aa20.25■□□□□ 0.83
GDPD3-201ENST00000360688 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
GDPD3-201ENST00000360688 TTLL6Q8N841 843 aa20.24■□□□□ 0.83
GDPD3-201ENST00000360688 TEX13AQ9BXU3 409 aaPredicted RBP20.24■□□□□ 0.83
GDPD3-201ENST00000360688 H0YIN7 160 aa20.23■□□□□ 0.83
GDPD3-201ENST00000360688 PRELPP51888 382 aa20.23■□□□□ 0.83
GDPD3-201ENST00000360688 FSTL1Q12841 308 aa20.23■□□□□ 0.83
GDPD3-201ENST00000360688 TBC1D9BQ66K14 1250 aa20.23■□□□□ 0.83
GDPD3-201ENST00000360688 ZC3H4Q9UPT8 1303 aaKnown RBP20.22■□□□□ 0.83
GDPD3-201ENST00000360688 CEMIPQ8WUJ3 1361 aa20.22■□□□□ 0.83
GDPD3-201ENST00000360688 LMNB1P20700 586 aa20.22■□□□□ 0.83
GDPD3-201ENST00000360688 IL6STP40189 918 aaPredicted RBP20.21■□□□□ 0.83
GDPD3-201ENST00000360688 PHACTR3Q96KR7 559 aa20.21■□□□□ 0.83
GDPD3-201ENST00000360688 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
GDPD3-201ENST00000360688 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
GDPD3-201ENST00000360688 ZNF330Q9Y3S2 320 aaPredicted RBP20.21■□□□□ 0.83
GDPD3-201ENST00000360688 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
GDPD3-201ENST00000360688 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
GDPD3-201ENST00000360688 COL11A2P13942 1736 aaPredicted RBP20.19■□□□□ 0.82
GDPD3-201ENST00000360688 NFKBIEO00221 500 aa20.19■□□□□ 0.82
GDPD3-201ENST00000360688 KCNQ3O43525 872 aa20.19■□□□□ 0.82
GDPD3-201ENST00000360688 A1BGP04217 495 aa20.19■□□□□ 0.82
GDPD3-201ENST00000360688 PRKAR2BP31323 418 aa20.19■□□□□ 0.82
GDPD3-201ENST00000360688 HTRA3P83110 453 aa20.19■□□□□ 0.82
GDPD3-201ENST00000360688 BRIP1Q9BX63 1249 aa20.19■□□□□ 0.82
GDPD3-201ENST00000360688 BCORQ6W2J9 1755 aa20.18■□□□□ 0.82
GDPD3-201ENST00000360688 GLTPD2A6NH11 291 aa20.18■□□□□ 0.82
GDPD3-201ENST00000360688 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
GDPD3-201ENST00000360688 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
GDPD3-201ENST00000360688 DICER1Q9UPY3 1922 aaKnown RBP20.18■□□□□ 0.82
GDPD3-201ENST00000360688 FER1L6Q2WGJ9 1857 aa20.17■□□□□ 0.82
GDPD3-201ENST00000360688 BTBD11A6QL63 1104 aa20.17■□□□□ 0.82
GDPD3-201ENST00000360688 CAMTA2O94983 1202 aa20.17■□□□□ 0.82
GDPD3-201ENST00000360688 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
GDPD3-201ENST00000360688 PDE6BP35913 854 aa20.16■□□□□ 0.82
GDPD3-201ENST00000360688 ZNF622Q969S3 477 aaKnown RBP eCLIP20.16■□□□□ 0.82
GDPD3-201ENST00000360688 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
GDPD3-201ENST00000360688 CACNA1SQ13698 1873 aa20.15■□□□□ 0.82
GDPD3-201ENST00000360688 PCNTO95613 3336 aa20.15■□□□□ 0.82
GDPD3-201ENST00000360688 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
GDPD3-201ENST00000360688 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
GDPD3-201ENST00000360688 SMC1BQ8NDV3 1235 aa20.15■□□□□ 0.82
GDPD3-201ENST00000360688 KLRG1Q96E93 195 aa20.14■□□□□ 0.81
GDPD3-201ENST00000360688 SETDB2Q96T68 719 aa20.14■□□□□ 0.81
GDPD3-201ENST00000360688 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
GDPD3-201ENST00000360688 USP16Q9Y5T5 823 aa20.14■□□□□ 0.81
GDPD3-201ENST00000360688 SLX4Q8IY92 1834 aa20.13■□□□□ 0.81
GDPD3-201ENST00000360688 C21orf2O43822 256 aa20.13■□□□□ 0.81
GDPD3-201ENST00000360688 DZIP3Q86Y13 1208 aaKnown RBP20.13■□□□□ 0.81
GDPD3-201ENST00000360688 CNBD1Q8NA66 436 aa20.13■□□□□ 0.81
GDPD3-201ENST00000360688 ZNF219Q9P2Y4 722 aaPredicted RBP20.13■□□□□ 0.81
GDPD3-201ENST00000360688 PRAMEF22A3QJZ6 481 aa20.12■□□□□ 0.81
GDPD3-201ENST00000360688 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
GDPD3-201ENST00000360688 PPP2R1AP30153 589 aa20.12■□□□□ 0.81
GDPD3-201ENST00000360688 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms