RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CSNK1E-201ENST00000359867 DOT1LQ8TEK3 1739 aa17.49■□□□□ 0.39
CSNK1E-201ENST00000359867 POTEAQ6S8J7 498 aa17.49■□□□□ 0.39
CSNK1E-201ENST00000359867 KDM3BQ7LBC6 1761 aa17.49■□□□□ 0.39
CSNK1E-201ENST00000359867 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
CSNK1E-201ENST00000359867 ITPRIPQ8IWB1 547 aa17.49■□□□□ 0.39
CSNK1E-201ENST00000359867 TMEM57Q8N5G2 664 aa17.49■□□□□ 0.39
CSNK1E-201ENST00000359867 BRPF3Q9ULD4 1205 aa17.49■□□□□ 0.39
CSNK1E-201ENST00000359867 ERVV-2B6SEH9 535 aa17.48■□□□□ 0.39
CSNK1E-201ENST00000359867 ITGB4P16144 1822 aa17.48■□□□□ 0.39
CSNK1E-201ENST00000359867 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
CSNK1E-201ENST00000359867 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
CSNK1E-201ENST00000359867 BRWD3Q6RI45 1802 aa17.46■□□□□ 0.39
CSNK1E-201ENST00000359867 API5Q9BZZ5 524 aaKnown RBP17.46■□□□□ 0.39
CSNK1E-201ENST00000359867 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
CSNK1E-201ENST00000359867 ZNF790Q6PG37 636 aa17.46■□□□□ 0.39
CSNK1E-201ENST00000359867 PIGBQ92521 554 aa17.46■□□□□ 0.39
CSNK1E-201ENST00000359867 RXRBP28702 533 aa17.45■□□□□ 0.38
CSNK1E-201ENST00000359867 EIF4A1P60842 406 aaKnown RBP17.45■□□□□ 0.38
CSNK1E-201ENST00000359867 ZBTB40Q9NUA8 1239 aa17.45■□□□□ 0.38
CSNK1E-201ENST00000359867 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
CSNK1E-201ENST00000359867 KCNQ2O43526 872 aa17.45■□□□□ 0.38
CSNK1E-201ENST00000359867 HDAC1Q13547 482 aaPredicted RBP17.44■□□□□ 0.38
CSNK1E-201ENST00000359867 ABCC4O15439 1325 aa17.44■□□□□ 0.38
CSNK1E-201ENST00000359867 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 RGS3P49796 1198 aa17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 ASAP1Q9ULH1 1129 aa17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 PTF1AQ7RTS3 328 aa17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 TTC5Q8N0Z6 440 aa17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 BCL9O00512 1426 aa17.43■□□□□ 0.38
CSNK1E-201ENST00000359867 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-201ENST00000359867 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
CSNK1E-201ENST00000359867 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
CSNK1E-201ENST00000359867 RGS12O14924 1447 aa17.41■□□□□ 0.38
CSNK1E-201ENST00000359867 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
CSNK1E-201ENST00000359867 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
CSNK1E-201ENST00000359867 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-201ENST00000359867 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
CSNK1E-201ENST00000359867 ATG3Q9NT62 314 aa17.4■□□□□ 0.38
CSNK1E-201ENST00000359867 PTPRCP08575 1304 aa17.4■□□□□ 0.38
CSNK1E-201ENST00000359867 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
CSNK1E-201ENST00000359867 GIGYF1O75420 1035 aaPredicted RBP17.38■□□□□ 0.37
CSNK1E-201ENST00000359867 C5P01031 1676 aa17.38■□□□□ 0.37
CSNK1E-201ENST00000359867 KCPQ6ZWJ8 1503 aa17.38■□□□□ 0.37
CSNK1E-201ENST00000359867 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
CSNK1E-201ENST00000359867 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
CSNK1E-201ENST00000359867 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
CSNK1E-201ENST00000359867 FMNL2Q96PY5 1086 aa17.37■□□□□ 0.37
CSNK1E-201ENST00000359867 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
CSNK1E-201ENST00000359867 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
CSNK1E-201ENST00000359867 ZMYND15Q9H091 742 aa17.37■□□□□ 0.37
CSNK1E-201ENST00000359867 DAXXQ9UER7 740 aaPredicted RBP17.37■□□□□ 0.37
CSNK1E-201ENST00000359867 HDGFL1Q5TGJ6 251 aa17.36■□□□□ 0.37
CSNK1E-201ENST00000359867 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
CSNK1E-201ENST00000359867 SBF2Q86WG5 1849 aa17.36■□□□□ 0.37
CSNK1E-201ENST00000359867 NFKBIBQ15653 356 aa17.36■□□□□ 0.37
CSNK1E-201ENST00000359867 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
CSNK1E-201ENST00000359867 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
CSNK1E-201ENST00000359867 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
CSNK1E-201ENST00000359867 ANXA1P04083 346 aa17.34■□□□□ 0.37
CSNK1E-201ENST00000359867 BTAF1O14981 1849 aa17.34■□□□□ 0.37
CSNK1E-201ENST00000359867 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
CSNK1E-201ENST00000359867 SNRPA1P09661 255 aaKnown RBP17.34■□□□□ 0.37
CSNK1E-201ENST00000359867 SLC4A9Q96Q91 983 aa17.34■□□□□ 0.37
CSNK1E-201ENST00000359867 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.36
CSNK1E-201ENST00000359867 HOXB7P09629 217 aa17.33■□□□□ 0.36
CSNK1E-201ENST00000359867 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
CSNK1E-201ENST00000359867 CCDC30Q5VVM6 783 aa17.33■□□□□ 0.36
CSNK1E-201ENST00000359867 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
CSNK1E-201ENST00000359867 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
CSNK1E-201ENST00000359867 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
CSNK1E-201ENST00000359867 TRIM37O94972 964 aa17.32■□□□□ 0.36
CSNK1E-201ENST00000359867 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
CSNK1E-201ENST00000359867 PROSER3Q2NL68 480 aa17.31■□□□□ 0.36
CSNK1E-201ENST00000359867 G2E3Q7L622 706 aa17.31■□□□□ 0.36
CSNK1E-201ENST00000359867 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
CSNK1E-201ENST00000359867 KCNQ4P56696 695 aa17.31■□□□□ 0.36
CSNK1E-201ENST00000359867 DNAJC10Q8IXB1 793 aa17.31■□□□□ 0.36
CSNK1E-201ENST00000359867 GCC1Q96CN9 775 aa17.3■□□□□ 0.36
CSNK1E-201ENST00000359867 LAMB4A4D0S4 1761 aa17.29■□□□□ 0.36
CSNK1E-201ENST00000359867 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
CSNK1E-201ENST00000359867 SIK1P57059 783 aa17.29■□□□□ 0.36
CSNK1E-201ENST00000359867 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-201ENST00000359867 MYL6BP14649 208 aa17.28■□□□□ 0.36
CSNK1E-201ENST00000359867 GSE1Q14687 1217 aa17.28■□□□□ 0.36
CSNK1E-201ENST00000359867 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-201ENST00000359867 NUCB1Q02818 461 aa17.28■□□□□ 0.36
CSNK1E-201ENST00000359867 A1BGP04217 495 aa17.27■□□□□ 0.36
CSNK1E-201ENST00000359867 ATP6V1AP38606 617 aa17.27■□□□□ 0.36
CSNK1E-201ENST00000359867 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.36
CSNK1E-201ENST00000359867 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-201ENST00000359867 CACNA1FO60840 1977 aa17.27■□□□□ 0.36
CSNK1E-201ENST00000359867 TJP1Q07157 1748 aa17.27■□□□□ 0.35
CSNK1E-201ENST00000359867 PDIA6Q15084 440 aa17.27■□□□□ 0.35
CSNK1E-201ENST00000359867 DBF4Q9UBU7 674 aaPredicted RBP17.27■□□□□ 0.35
CSNK1E-201ENST00000359867 ITPK1Q13572 414 aa17.26■□□□□ 0.35
CSNK1E-201ENST00000359867 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-201ENST00000359867 FLIIQ13045 1269 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms