RNA–Protein interactions for RNA: ENST00000359513.8

ATG13-201, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 4,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-201ENST00000359513 MRPL50Q8N5N7 158 aaKnown RBP10.29□□□□□ -0.76
ATG13-201ENST00000359513 ABCC3O15438 1527 aa10.29□□□□□ -0.76
ATG13-201ENST00000359513 KSR2Q6VAB6 950 aa10.29□□□□□ -0.76
ATG13-201ENST00000359513 LAMC1P11047 1609 aa10.29□□□□□ -0.76
ATG13-201ENST00000359513 ARHGEF10O15013 1369 aa10.29□□□□□ -0.76
ATG13-201ENST00000359513 RBM5P52756 815 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATG13-201ENST00000359513 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
ATG13-201ENST00000359513 NACAP1Q9BZK3 213 aa10.29□□□□□ -0.76
ATG13-201ENST00000359513 ANKIB1Q9P2G1 1089 aa10.29□□□□□ -0.76
ATG13-201ENST00000359513 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
ATG13-201ENST00000359513 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
ATG13-201ENST00000359513 ZNF521Q96K83 1311 aa10.28□□□□□ -0.76
ATG13-201ENST00000359513 PRR36Q9H6K5 1346 aa10.28□□□□□ -0.76
ATG13-201ENST00000359513 ZSCAN25Q6NSZ9 544 aa10.28□□□□□ -0.76
ATG13-201ENST00000359513 CREBRFQ8IUR6 639 aa10.28□□□□□ -0.76
ATG13-201ENST00000359513 PCDH11XQ9BZA7 1347 aa10.27□□□□□ -0.76
ATG13-201ENST00000359513 PCDH11YQ9BZA8 1340 aa10.27□□□□□ -0.76
ATG13-201ENST00000359513 PCDHB15Q9Y5E8 787 aa10.27□□□□□ -0.76
ATG13-201ENST00000359513 IGHDP01880 384 aa10.27□□□□□ -0.77
ATG13-201ENST00000359513 ZNF790Q6PG37 636 aa10.27□□□□□ -0.77
ATG13-201ENST00000359513 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
ATG13-201ENST00000359513 RPGRQ92834 1020 aaKnown RBP10.27□□□□□ -0.77
ATG13-201ENST00000359513 ARHGAP31Q2M1Z3 1444 aa10.27□□□□□ -0.77
ATG13-201ENST00000359513 RABEP1Q15276 862 aa10.27□□□□□ -0.77
ATG13-201ENST00000359513 CAVIN4Q5BKX8 364 aa10.27□□□□□ -0.77
ATG13-201ENST00000359513 ANTXR1Q9H6X2 564 aa10.27□□□□□ -0.77
ATG13-201ENST00000359513 PHAXQ9H814 394 aaKnown RBP10.27□□□□□ -0.77
ATG13-201ENST00000359513 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
ATG13-201ENST00000359513 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
ATG13-201ENST00000359513 FSD2A1L4K1 749 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
ATG13-201ENST00000359513 NUCB2P80303 420 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 IKQ13123 557 aaPredicted RBP10.26□□□□□ -0.77
ATG13-201ENST00000359513 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATG13-201ENST00000359513 LMBR1LQ6UX01 489 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 LINS1Q8NG48 757 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
ATG13-201ENST00000359513 DCAF8L1A6NGE4 600 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 GRM8O00222 908 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 RLBP1P12271 317 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 ATP2B2Q01814 1243 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 CWF19L2Q2TBE0 894 aaKnown RBP10.26□□□□□ -0.77
ATG13-201ENST00000359513 SNRKQ9NRH2 765 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 CYP46A1Q9Y6A2 500 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 C6orf229H3BNL8 230 aa10.26□□□□□ -0.77
ATG13-201ENST00000359513 NCBP3Q53F19 620 aaKnown RBP10.26□□□□□ -0.77
ATG13-201ENST00000359513 NIP7Q9Y221 180 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATG13-201ENST00000359513 TDO2P48775 406 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 DZIP3Q86Y13 1208 aaKnown RBP10.25□□□□□ -0.77
ATG13-201ENST00000359513 SETDB2Q96T68 719 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 CHL1O00533 1208 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 CLCN1P35523 988 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 GLIPR1L2Q4G1C9 344 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 DDX46Q7L014 1031 aaKnown RBP10.25□□□□□ -0.77
ATG13-201ENST00000359513 G2E3Q7L622 706 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 CDC5LQ99459 802 aaKnown RBP10.25□□□□□ -0.77
ATG13-201ENST00000359513 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
ATG13-201ENST00000359513 ALDH1L1O75891 902 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 TSHZ3Q63HK5 1081 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 ZSCAN29Q8IWY8 852 aaPredicted RBP10.25□□□□□ -0.77
ATG13-201ENST00000359513 DDX21Q9NR30 783 aaKnown RBP eCLIP10.25□□□□□ -0.77
ATG13-201ENST00000359513 USP21Q9UK80 565 aa10.25□□□□□ -0.77
ATG13-201ENST00000359513 ATP2B1P20020 1258 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 AIDAQ96BJ3 306 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 ECHDC1Q9NTX5 307 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.24□□□□□ -0.77
ATG13-201ENST00000359513 MYOM2P54296 1465 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 BLOC1S2Q6QNY1 142 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 BICD2Q8TD16 824 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 STK3Q13188 491 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 SLC5A1P13866 664 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 MCM2P49736 904 aa10.24□□□□□ -0.77
ATG13-201ENST00000359513 TRMT2AQ8IZ69 625 aaKnown RBP10.24□□□□□ -0.77
ATG13-201ENST00000359513 RTCBQ9Y3I0 505 aaKnown RBP10.24□□□□□ -0.77
ATG13-201ENST00000359513 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
ATG13-201ENST00000359513 A1BGP04217 495 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 RHPN1Q8TCX5 695 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 ZNF496Q96IT1 587 aaPredicted RBP10.23□□□□□ -0.77
ATG13-201ENST00000359513 TFCP2L1Q9NZI6 479 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 CTNNA3Q9UI47 895 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 ARHGEF25Q86VW2 580 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.77
ATG13-201ENST00000359513 JAKMIP1Q96N16 626 aaKnown RBP10.23□□□□□ -0.77
ATG13-201ENST00000359513 NLRP3Q96P20 1036 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 A2ML1A8K2U0 1454 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 ZMYND15Q9H091 742 aa10.23□□□□□ -0.77
ATG13-201ENST00000359513 XRCC6P12956 609 aaKnown RBP eCLIP10.22□□□□□ -0.77
ATG13-201ENST00000359513 TPM4P67936 248 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 ANKRD44Q8N8A2 993 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 UPF3BQ9BZI7 483 aaKnown RBP10.22□□□□□ -0.77
ATG13-201ENST00000359513 SLC52A2Q9HAB3 445 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 IL17REQ8NFR9 667 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 ABCA9Q8IUA7 1624 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 KIAA0232Q92628 1395 aa10.22□□□□□ -0.77
ATG13-201ENST00000359513 PA2G4Q9UQ80 394 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms