RNA–Protein interactions for RNA: ENST00000359415.8

ARCN1-202, Transcript of archain 1, humanhuman

TSL 1 (best) BASIC

Gene ARCN1, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-202ENST00000359415 COL18A1P39060 1754 aa8.03□□□□□ -1.12
ARCN1-202ENST00000359415 CPDO75976 1380 aa8.03□□□□□ -1.12
ARCN1-202ENST00000359415 LRRC37A3O60309 1634 aa8.03□□□□□ -1.12
ARCN1-202ENST00000359415 DCAF5Q96JK2 942 aa8.03□□□□□ -1.12
ARCN1-202ENST00000359415 ROBO1Q9Y6N7 1651 aa8.03□□□□□ -1.12
ARCN1-202ENST00000359415 NUCB1Q02818 461 aa8.03□□□□□ -1.12
ARCN1-202ENST00000359415 PROM2Q8N271 834 aa8.03□□□□□ -1.12
ARCN1-202ENST00000359415 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
ARCN1-202ENST00000359415 CCT4P50991 539 aaKnown RBP8.02□□□□□ -1.12
ARCN1-202ENST00000359415 AAMPQ13685 434 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 XAGE3Q8WTP9 111 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 DNAAF4Q8WXU2 420 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 RBM42Q9BTD8 480 aaKnown RBP8.02□□□□□ -1.13
ARCN1-202ENST00000359415 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 USP44Q9H0E7 712 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 DBF4Q9UBU7 674 aaPredicted RBP8.02□□□□□ -1.13
ARCN1-202ENST00000359415 ATP5J2-PTCD1G3V325 749 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 GNAI2P04899 355 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 UBTFL1P0CB47 393 aaPredicted RBP8.02□□□□□ -1.13
ARCN1-202ENST00000359415 COPS6Q7L5N1 327 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 RIC3Q7Z5B4 369 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 ACSBG1Q96GR2 724 aa8.02□□□□□ -1.13
ARCN1-202ENST00000359415 FAM208AQ9UK61 1670 aaKnown RBP8.01□□□□□ -1.13
ARCN1-202ENST00000359415 IL1RAPL2Q9NP60 686 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 ANKRD44Q8N8A2 993 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 C8orf37Q96NL8 207 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 CARD10Q9BWT7 1032 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 PCDH11XQ9BZA7 1347 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 PCDH11YQ9BZA8 1340 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 VIRMAQ69YN4 1812 aaKnown RBP8.01□□□□□ -1.13
ARCN1-202ENST00000359415 A1BGP04217 495 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 SPRYD3Q8NCJ5 442 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 IPO9Q96P70 1041 aaKnown RBP8.01□□□□□ -1.13
ARCN1-202ENST00000359415 C9orf78Q9NZ63 289 aaPredicted RBP8.01□□□□□ -1.13
ARCN1-202ENST00000359415 ASAP1Q9ULH1 1129 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 LMO7Q8WWI1 1683 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 ATP10DQ9P241 1426 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 EP400Q96L91 3159 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 CRYBG1Q9Y4K1 1723 aa8.01□□□□□ -1.13
ARCN1-202ENST00000359415 FAM182BQ5T319 152 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
ARCN1-202ENST00000359415 ADCY9O60503 1353 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 NCAPD2Q15021 1401 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 MKRN4PQ13434 485 aaPredicted RBP8□□□□□ -1.13
ARCN1-202ENST00000359415 MYD88Q99836 296 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 PDIA6Q15084 440 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 NOP58Q9Y2X3 529 aaKnown RBP8□□□□□ -1.13
ARCN1-202ENST00000359415 OVOS2A0A0G2JMS6 1433 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 SRGAP3O43295 1099 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 BEND3Q5T5X7 828 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 PPP1R42Q7Z4L9 355 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 GCC1Q96CN9 775 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 FMNL2Q96PY5 1086 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 ZBTB3Q9H5J0 574 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 BABAM1Q9NWV8 329 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 TMOD3Q9NYL9 352 aa8□□□□□ -1.13
ARCN1-202ENST00000359415 MAP4K4O95819 1239 aaPredicted RBP7.99□□□□□ -1.13
ARCN1-202ENST00000359415 KLHDC4Q8TBB5 520 aa7.99□□□□□ -1.13
ARCN1-202ENST00000359415 DCTPP1Q9H773 170 aa7.99□□□□□ -1.13
ARCN1-202ENST00000359415 PA2G4Q9UQ80 394 aaKnown RBP7.99□□□□□ -1.13
ARCN1-202ENST00000359415 TOM1O60784 492 aa7.99□□□□□ -1.13
ARCN1-202ENST00000359415 SNRPA1P09661 255 aaKnown RBP7.99□□□□□ -1.13
ARCN1-202ENST00000359415 SIL1Q9H173 461 aa7.99□□□□□ -1.13
ARCN1-202ENST00000359415 GOLGB1Q14789 3259 aaKnown RBP7.99□□□□□ -1.13
ARCN1-202ENST00000359415 SURF6O75683 361 aaKnown RBP7.99□□□□□ -1.13
ARCN1-202ENST00000359415 NUTM1Q86Y26 1132 aa7.99□□□□□ -1.13
ARCN1-202ENST00000359415 RPAP2Q8IXW5 612 aaPredicted RBP7.99□□□□□ -1.13
ARCN1-202ENST00000359415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.99□□□□□ -1.134e-8■■□□□ 14.4
ARCN1-202ENST00000359415 HSP90AB1P08238 724 aaKnown RBP7.98□□□□□ -1.13
ARCN1-202ENST00000359415 KCNQ4P56696 695 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 OS9Q13438 667 aaPredicted RBP7.98□□□□□ -1.13
ARCN1-202ENST00000359415 TTLL7Q6ZT98 887 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 KDM3BQ7LBC6 1761 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 GNAI3P08754 354 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 KSR2Q6VAB6 950 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 PIGBQ92521 554 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
ARCN1-202ENST00000359415 NHSL1Q5SYE7 1610 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 GSPT1P15170 499 aaKnown RBP7.98□□□□□ -1.13
ARCN1-202ENST00000359415 NGLY1Q96IV0 654 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 CCDC85AQ96PX6 553 aaPredicted RBP7.98□□□□□ -1.13
ARCN1-202ENST00000359415 LTBP4Q8N2S1 1624 aa7.98□□□□□ -1.13
ARCN1-202ENST00000359415 ABCA3Q99758 1704 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 NBPF26B4DH59 902 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 EXOC5O00471 708 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 HMMRO75330 724 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
ARCN1-202ENST00000359415 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
ARCN1-202ENST00000359415 NBPF14Q5TI25 921 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 NBPF10Q6P3W6 841 aaKnown RBP7.97□□□□□ -1.13
ARCN1-202ENST00000359415 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 NBPF15Q8N660 670 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 HYPKQ9NX55 129 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 SPDYE4A6NLX3 237 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 DNAJC10Q8IXB1 793 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 CHMP3Q9Y3E7 222 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 SOS1Q07889 1333 aaPredicted RBP7.97□□□□□ -1.13
ARCN1-202ENST00000359415 HOXB7P09629 217 aa7.97□□□□□ -1.13
ARCN1-202ENST00000359415 ECM2O94769 699 aaPredicted RBP7.96□□□□□ -1.13
ARCN1-202ENST00000359415 IGKV5-2P06315 115 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms