RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ITSN2Q9NZM3 1697 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 SNAPC4Q5SXM2 1469 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 SLX1AQ9BQ83 275 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 ORAI3Q9BRQ5 295 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 NOP58Q9Y2X3 529 aaKnown RBP2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 QRICH2Q9H0J4 1663 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 PHLDB1Q86UU1 1377 aa2.86□□□□□ -1.95
SMARCAD1-202ENST00000359052 TMEM229AB2RXF0 380 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 RASSF7Q02833 373 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 TMTC2Q8N394 836 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 TNNI2P48788 182 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 MARSP56192 900 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 FKBP5Q13451 457 aaPredicted RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 MAP9Q49MG5 647 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 NBPF6Q5VWK0 638 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 AFAP1L2Q8N4X5 818 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 FBXW7Q969H0 707 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 MS4A3Q96HJ5 214 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 CALR3Q96L12 384 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 NBPF4Q96M43 638 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 IER2Q9BTL4 223 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 ACBD3Q9H3P7 528 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 RNF17Q9BXT8 1623 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 ATF4P18848 351 aaPredicted RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 DALRD3Q5D0E6 543 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 NXNQ6DKJ4 435 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 C3orf58Q8NDZ4 430 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 PRKD2Q9BZL6 878 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 MUC3BQ9H195 1237 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 ZNF518AQ6AHZ1 1483 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 ABCC2Q92887 1545 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 INO80Q9ULG1 1556 aaPredicted RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 ZC3H13Q5T200 1668 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 GNALP38405 381 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 ST13P50502 369 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 CASP7P55210 303 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 ZCCHC11Q5TAX3 1644 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 KIAA0319Q5VV43 1072 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 CBARPQ8N350 705 aaPredicted RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 GNL3LQ9NVN8 582 aaKnown RBP2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 CHPF2Q9P2E5 772 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 DCTN4Q9UJW0 460 aa2.85□□□□□ -1.95
SMARCAD1-202ENST00000359052 MAST1Q9Y2H9 1570 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 OATP04181 439 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 SF3A1Q15459 793 aaKnown RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 GRIPAP1Q4V328 841 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 C1orf53Q5VUE5 145 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 CCDC97Q96F63 343 aaPredicted RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 ZSWIM6Q9HCJ5 1215 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 COLQQ9Y215 455 aaPredicted RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 PTPROQ16827 1216 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 C6orf132Q5T0Z8 1188 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 XKR5Q6UX68 686 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 C11orf96Q7Z7L8 435 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 GIPC2Q8TF65 315 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 RBM42Q9BTD8 480 aaKnown RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 ADAM33Q9BZ11 813 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 PRDM6Q9NQX0 595 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 MAGEC2Q9UBF1 373 aaPredicted RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 GPSM3Q9Y4H4 160 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 COL17A1Q9UMD9 1497 aaPredicted RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 POU3F2P20265 443 aaPredicted RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 ATN1P54259 1190 aaPredicted RBP2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 MCL1Q07820 350 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 FAM43AQ8N2R8 423 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 KLRG1Q96E93 195 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 NELL2Q99435 816 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 LRFN2Q9ULH4 789 aa2.84□□□□□ -1.95
SMARCAD1-202ENST00000359052 VPS72Q15906 364 aa2.84□□□□□ -1.96
SMARCAD1-202ENST00000359052 ERAP2Q6P179 960 aa2.84□□□□□ -1.96
SMARCAD1-202ENST00000359052 BCL2L13Q9BXK5 485 aa2.84□□□□□ -1.96
SMARCAD1-202ENST00000359052 BCS1LQ9Y276 419 aa2.84□□□□□ -1.96
SMARCAD1-202ENST00000359052 ABCC8Q09428 1581 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZSCAN18Q8TBC5 510 aaPredicted RBP2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZNF608Q9ULD9 1512 aaPredicted RBP2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 TPD52L2O43399 206 aaKnown RBP2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 SDR16C5Q8N3Y7 309 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 KISS1RQ969F8 398 aaPredicted RBP2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 MAGI2Q86UL8 1455 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 MAGI1Q96QZ7 1491 aaPredicted RBP2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 RCCD1A6NED2 376 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 TM4SF20Q53R12 229 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 B3GNT9Q6UX72 402 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 CERKQ8TCT0 537 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 CITED4Q96RK1 184 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 PREX2Q70Z35 1606 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 FAM221BA6H8Z2 402 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 ITGBL1O95965 494 aaPredicted RBP2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZNF687Q8N1G0 1237 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 HELQQ8TDG4 1101 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 DDX12PQ92771 950 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 DDX21Q9NR30 783 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 MAGI3Q5TCQ9 1506 aa2.83□□□□□ -1.96
SMARCAD1-202ENST00000359052 STRCQ7RTU9 1775 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 PPP1R18Q6NYC8 613 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 RBBP8NLQ8NC74 664 aaPredicted RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZNF669Q96BR6 464 aaPredicted RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 TRMT2BQ96GJ1 504 aaKnown RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 MYO19Q96H55 970 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 UBA5Q9GZZ9 404 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms