RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
CCL20-201ENST00000358813 A0A1W2PRU2 124 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L10C9JJH3 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L12C9JPN9 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L21D6R901 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 GNRH1P01148 92 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 CTSOP43234 321 aaPredicted RBP8.51□□□□□ -1.05
CCL20-201ENST00000358813 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 NLRP3Q96P20 1036 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 ARHGEF10LQ9HCE6 1279 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 ABCC10Q5T3U5 1492 aa8.51□□□□□ -1.05
CCL20-201ENST00000358813 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
CCL20-201ENST00000358813 RAB6BQ9NRW1 208 aa8.5□□□□□ -1.05
CCL20-201ENST00000358813 MKRN1Q9UHC7 482 aaKnown RBP8.5□□□□□ -1.05
CCL20-201ENST00000358813 SOWAHDA6NJG2 315 aa8.49□□□□□ -1.05
CCL20-201ENST00000358813 SOBPA7XYQ1 873 aa8.49□□□□□ -1.05
CCL20-201ENST00000358813 DNAJC14Q6Y2X3 702 aaPredicted RBP8.49□□□□□ -1.05
CCL20-201ENST00000358813 CLP1Q92989 425 aaKnown RBP8.49□□□□□ -1.05
CCL20-201ENST00000358813 IGSF5Q9NSI5 407 aa8.49□□□□□ -1.05
CCL20-201ENST00000358813 KIF13AQ9H1H9 1805 aa8.49□□□□□ -1.05
CCL20-201ENST00000358813 ERICH3Q5RHP9 1530 aa8.49□□□□□ -1.05
CCL20-201ENST00000358813 RASA1P20936 1047 aa8.48□□□□□ -1.05
CCL20-201ENST00000358813 CLN3Q13286 438 aa8.48□□□□□ -1.05
CCL20-201ENST00000358813 ESCO1Q5FWF5 840 aa8.48□□□□□ -1.05
CCL20-201ENST00000358813 MRRFQ96E11 262 aaKnown RBP8.48□□□□□ -1.05
CCL20-201ENST00000358813 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
CCL20-201ENST00000358813 MAPKBP1O60336 1514 aa8.48□□□□□ -1.05
CCL20-201ENST00000358813 SHROOM2Q13796 1616 aa8.47□□□□□ -1.05
CCL20-201ENST00000358813 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
CCL20-201ENST00000358813 GTF2IP78347 998 aa8.47□□□□□ -1.05
CCL20-201ENST00000358813 PSME1Q06323 249 aa8.47□□□□□ -1.05
CCL20-201ENST00000358813 PTK7Q13308 1070 aa8.47□□□□□ -1.05
CCL20-201ENST00000358813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CCL20-201ENST00000358813 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
CCL20-201ENST00000358813 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
CCL20-201ENST00000358813 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
CCL20-201ENST00000358813 CNKSR1Q969H4 720 aa8.47□□□□□ -1.05
CCL20-201ENST00000358813 STAU1O95793 577 aaKnown RBP8.46□□□□□ -1.06
CCL20-201ENST00000358813 IL2RAP01589 272 aa8.46□□□□□ -1.06
CCL20-201ENST00000358813 ATP2B4P23634 1241 aa8.46□□□□□ -1.06
CCL20-201ENST00000358813 RNF144AP50876 292 aaPredicted RBP8.46□□□□□ -1.06
CCL20-201ENST00000358813 ANKMY2Q8IV38 441 aa8.46□□□□□ -1.06
CCL20-201ENST00000358813 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
CCL20-201ENST00000358813 BCL2L13Q9BXK5 485 aa8.46□□□□□ -1.06
CCL20-201ENST00000358813 PCDHGA11Q9Y5H2 935 aa8.46□□□□□ -1.06
CCL20-201ENST00000358813 DIP2BQ9P265 1576 aa8.46□□□□□ -1.06
CCL20-201ENST00000358813 ZNF16P17020 682 aaPredicted RBP8.45□□□□□ -1.06
CCL20-201ENST00000358813 GPC1P35052 558 aa8.45□□□□□ -1.06
CCL20-201ENST00000358813 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
CCL20-201ENST00000358813 GDF10P55107 478 aa8.45□□□□□ -1.06
CCL20-201ENST00000358813 MARSP56192 900 aaKnown RBP8.45□□□□□ -1.06
CCL20-201ENST00000358813 SLC27A3Q5K4L6 730 aa8.45□□□□□ -1.06
CCL20-201ENST00000358813 XAGE2Q96GT9 111 aa8.45□□□□□ -1.06
CCL20-201ENST00000358813 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
CCL20-201ENST00000358813 KIAA1522Q9P206 1035 aaPredicted RBP8.45□□□□□ -1.06
CCL20-201ENST00000358813 TSPOAP1O95153 1857 aa8.45□□□□□ -1.06
CCL20-201ENST00000358813 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
CCL20-201ENST00000358813 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
CCL20-201ENST00000358813 BIN2Q9UBW5 565 aaPredicted RBP8.44□□□□□ -1.06
CCL20-201ENST00000358813 INHAP05111 366 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 SERPINB4P48594 390 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 SCNN1DP51172 638 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 CENPCQ03188 943 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 C1orf216Q8TAB5 229 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
CCL20-201ENST00000358813 SLAIN2Q9P270 581 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 CARMIL2Q6F5E8 1435 aa8.43□□□□□ -1.06
CCL20-201ENST00000358813 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
CCL20-201ENST00000358813 CLDN10P78369 228 aa8.42□□□□□ -1.06
CCL20-201ENST00000358813 ZNF326Q5BKZ1 582 aaKnown RBP8.42□□□□□ -1.06
CCL20-201ENST00000358813 GRIP2Q9C0E4 1043 aa8.42□□□□□ -1.06
CCL20-201ENST00000358813 SERTAD1Q9UHV2 236 aa8.42□□□□□ -1.06
CCL20-201ENST00000358813 ADGRL1O94910 1474 aa8.42□□□□□ -1.06
CCL20-201ENST00000358813 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
CCL20-201ENST00000358813 TOP2BQ02880 1626 aa8.42□□□□□ -1.06
CCL20-201ENST00000358813 PTPRGP23470 1445 aa8.41□□□□□ -1.06
CCL20-201ENST00000358813 DPYDQ12882 1025 aa8.41□□□□□ -1.06
CCL20-201ENST00000358813 TLR1Q15399 786 aa8.41□□□□□ -1.06
CCL20-201ENST00000358813 FAM9AQ8IZU1 332 aaPredicted RBP8.41□□□□□ -1.06
CCL20-201ENST00000358813 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
CCL20-201ENST00000358813 GIPC2Q8TF65 315 aa8.41□□□□□ -1.06
CCL20-201ENST00000358813 ZSCAN10Q96SZ4 725 aaPredicted RBP8.41□□□□□ -1.06
CCL20-201ENST00000358813 ADCY10Q96PN6 1610 aa8.4□□□□□ -1.06
CCL20-201ENST00000358813 BIVM-ERCC5R4GMW8 1640 aa8.4□□□□□ -1.06
CCL20-201ENST00000358813 TEX14Q8IWB6 1497 aa8.4□□□□□ -1.06
CCL20-201ENST00000358813 TMEM229AB2RXF0 380 aa8.4□□□□□ -1.06
CCL20-201ENST00000358813 WASLO00401 505 aaPredicted RBP8.4□□□□□ -1.06
CCL20-201ENST00000358813 BACH1O14867 736 aa8.4□□□□□ -1.06
CCL20-201ENST00000358813 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
CCL20-201ENST00000358813 PTSQ03393 145 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms