RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 RFX1P22670 979 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 MTIF2P46199 727 aaKnown RBP10.26□□□□□ -0.77
CTNND1-201ENST00000358694 CKAP2LQ8IYA6 745 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 CPLX3Q8WVH0 158 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 NAA15Q9BXJ9 866 aaKnown RBP10.26□□□□□ -0.77
CTNND1-201ENST00000358694 MMRN2Q9H8L6 949 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 CNTLNQ9NXG0 1405 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 CASTP20810 708 aaKnown RBP10.26□□□□□ -0.77
CTNND1-201ENST00000358694 MXRA7P84157 204 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 FBF1Q8TES7 1133 aa10.26□□□□□ -0.77
CTNND1-201ENST00000358694 U3KPZ7 1027 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-201ENST00000358694 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 TMOD3Q9NYL9 352 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 XPCQ01831 940 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-201ENST00000358694 CALML4Q96GE6 196 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 TMX1Q9H3N1 280 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 MYO1BO43795 1136 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
CTNND1-201ENST00000358694 MAP3K12Q12852 859 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 THEMISQ8N1K5 641 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-201ENST00000358694 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 TSR2Q969E8 191 aaKnown RBP10.25□□□□□ -0.77
CTNND1-201ENST00000358694 IQCGQ9H095 443 aaKnown RBP10.25□□□□□ -0.77
CTNND1-201ENST00000358694 SLC12A7Q9Y666 1083 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 A0A1W2PRG0 241 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 STX6O43752 255 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 URI1O94763 535 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-201ENST00000358694 MAATS1Q7Z4T9 603 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 VAT1LQ9HCJ6 419 aa10.25□□□□□ -0.77
CTNND1-201ENST00000358694 IDEP14735 1019 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 A0A087WZG4 1122 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 PTCD1O75127 700 aaKnown RBP10.24□□□□□ -0.77
CTNND1-201ENST00000358694 DAAM2Q86T65 1068 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
CTNND1-201ENST00000358694 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 SLC5A1P13866 664 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 ZC3H6P61129 1189 aaKnown RBP10.24□□□□□ -0.77
CTNND1-201ENST00000358694 AMPD3Q01432 767 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 PTPN14Q15678 1187 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 ODF2LQ9ULJ1 636 aa10.24□□□□□ -0.77
CTNND1-201ENST00000358694 PHACTR2O75167 634 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 TPD52P55327 224 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC117Q8IWD4 279 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC83Q8IWF9 413 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-201ENST00000358694 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.773e-7■□□□□ 10.1
CTNND1-201ENST00000358694 ADAMTS8Q9UP79 889 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 CATIPQ7Z7H3 387 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 BAZ1AQ9NRL2 1556 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-201ENST00000358694 ECM2O94769 699 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-201ENST00000358694 SNX16P57768 344 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 FERMT3Q86UX7 667 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC12Q8WUD4 166 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-201ENST00000358694 TCP11L1Q9NUJ3 509 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 ANAPC4Q9UJX5 808 aa10.23□□□□□ -0.77
CTNND1-201ENST00000358694 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC63Q8NA47 563 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 C8orf76Q96K31 380 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 PAIP2Q9BPZ3 127 aaKnown RBP10.22□□□□□ -0.77
CTNND1-201ENST00000358694 ANO10Q9NW15 660 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 FANCIQ9NVI1 1328 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 KIF2AO00139 706 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-201ENST00000358694 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 HLA-DOAP06340 250 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 KIAA0753Q2KHM9 967 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 DDX12PQ92771 950 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 TBCAO75347 108 aaKnown RBP10.22□□□□□ -0.77
CTNND1-201ENST00000358694 CFAP58Q5T655 872 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 PDCL2Q8N4E4 241 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 GUCY1B3Q02153 619 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 DPH6Q7L8W6 267 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 CNNM3Q8NE01 707 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-201ENST00000358694 CDK19Q9BWU1 502 aa10.22□□□□□ -0.77
CTNND1-201ENST00000358694 RNF41Q9H4P4 317 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC160A6NGH7 325 aa10.21□□□□□ -0.77
CTNND1-201ENST00000358694 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.21□□□□□ -0.77
CTNND1-201ENST00000358694 TRMT112Q9UI30 125 aaKnown RBP10.21□□□□□ -0.77
CTNND1-201ENST00000358694 V9GYY5 206 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-201ENST00000358694 CECR2Q9BXF3 1484 aa10.21□□□□□ -0.77
CTNND1-201ENST00000358694 GOLGA8AA7E2F4 631 aa10.21□□□□□ -0.77
CTNND1-201ENST00000358694 GOLGA8BA8MQT2 603 aa10.21□□□□□ -0.77
CTNND1-201ENST00000358694 CEP112Q8N8E3 955 aa10.21□□□□□ -0.77
CTNND1-201ENST00000358694 BIN2Q9UBW5 565 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-201ENST00000358694 IFIT5Q13325 482 aaKnown RBP10.21□□□□□ -0.77
CTNND1-201ENST00000358694 CCDC6Q16204 474 aa10.21□□□□□ -0.77
CTNND1-201ENST00000358694 CTR9Q6PD62 1173 aa10.21□□□□□ -0.77
CTNND1-201ENST00000358694 ZNF213O14771 459 aa10.21□□□□□ -0.78
CTNND1-201ENST00000358694 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.78
CTNND1-201ENST00000358694 NCBP1Q09161 790 aaKnown RBP10.21□□□□□ -0.78
CTNND1-201ENST00000358694 BIRC2Q13490 618 aa10.21□□□□□ -0.78
CTNND1-201ENST00000358694 SLC4A8Q2Y0W8 1093 aa10.21□□□□□ -0.78
CTNND1-201ENST00000358694 ANKLE2Q86XL3 938 aa10.21□□□□□ -0.78
CTNND1-201ENST00000358694 TBC1D5Q92609 795 aa10.21□□□□□ -0.78
CTNND1-201ENST00000358694 SMARCC1Q92922 1105 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-201ENST00000358694 NAP1L3Q99457 506 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-201ENST00000358694 GRPEL1Q9HAV7 217 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms