RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
FN1-205ENST00000357867 LMOD1P29536 600 aaPredicted RBP12.9□□□□□ -0.34
FN1-205ENST00000357867 ZRSR2Q15696 482 aaKnown RBP12.9□□□□□ -0.34
FN1-205ENST00000357867 PTPRCP08575 1304 aa12.9□□□□□ -0.34
FN1-205ENST00000357867 DEF6Q9H4E7 631 aa12.9□□□□□ -0.34
FN1-205ENST00000357867 MIS18AQ9NYP9 233 aa12.9□□□□□ -0.34
FN1-205ENST00000357867 PARP3Q9Y6F1 533 aa12.89□□□□□ -0.35
FN1-205ENST00000357867 PLCH2O75038 1416 aa12.89□□□□□ -0.35
FN1-205ENST00000357867 STK3Q13188 491 aa12.89□□□□□ -0.35
FN1-205ENST00000357867 GPTP24298 496 aa12.89□□□□□ -0.35
FN1-205ENST00000357867 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
FN1-205ENST00000357867 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
FN1-205ENST00000357867 TEX35Q5T0J7 233 aa12.89□□□□□ -0.35
FN1-205ENST00000357867 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
FN1-205ENST00000357867 ANKRD18AQ8IVF6 992 aa12.89□□□□□ -0.35
FN1-205ENST00000357867 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
FN1-205ENST00000357867 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
FN1-205ENST00000357867 MBD3O95983 291 aa12.89□□□□□ -0.35
FN1-205ENST00000357867 PDE4BQ07343 736 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 NME9Q86XW9 330 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 ARID3AQ99856 593 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 CATIPQ7Z7H3 387 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 ACEP12821 1306 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
FN1-205ENST00000357867 ABCC1P33527 1531 aa12.88□□□□□ -0.35
FN1-205ENST00000357867 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
FN1-205ENST00000357867 ARGLU1Q9NWB6 273 aaPredicted RBP12.87□□□□□ -0.35
FN1-205ENST00000357867 TRPM2O94759 1503 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 CCDC12Q8WUD4 166 aaPredicted RBP12.87□□□□□ -0.35
FN1-205ENST00000357867 PIBF1Q8WXW3 757 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 KRT85P78386 507 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 MNS1Q8NEH6 495 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 TRAF1Q13077 416 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
FN1-205ENST00000357867 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 RANBP6O60518 1105 aaKnown RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 KIF5BP33176 963 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 WDR62O43379 1518 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 ZNF213O14771 459 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 SEPT7Q16181 437 aaKnown RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 JDP2Q8WYK2 163 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 B4DLN1 442 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 MRPL12P52815 198 aaKnown RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 ATP10BO94823 1461 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 GPATCH8Q9UKJ3 1502 aaKnown RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 GCC2Q8IWJ2 1684 aa12.86□□□□□ -0.35
FN1-205ENST00000357867 BAG4O95429 457 aaKnown RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
FN1-205ENST00000357867 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 TTLL5Q6EMB2 1281 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 LDHAL6AQ6ZMR3 332 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 DNAAF4Q8WXU2 420 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 PHAXQ9H814 394 aaKnown RBP12.85□□□□□ -0.35
FN1-205ENST00000357867 PPM1FP49593 454 aaPredicted RBP12.85□□□□□ -0.35
FN1-205ENST00000357867 FGFR1OPO95684 399 aaKnown RBP12.85□□□□□ -0.35
FN1-205ENST00000357867 PDRG1Q9NUG6 133 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
FN1-205ENST00000357867 SERPINC1P01008 464 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 GRM1Q13255 1194 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 TRIM5Q9C035 493 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 MAP3K2Q9Y2U5 619 aa12.85□□□□□ -0.35
FN1-205ENST00000357867 ZNF397Q8NF99 534 aaPredicted RBP12.84□□□□□ -0.35
FN1-205ENST00000357867 ERCC4Q92889 916 aaPredicted RBP12.84□□□□□ -0.35
FN1-205ENST00000357867 NEFHP12036 1026 aa12.84□□□□□ -0.35
FN1-205ENST00000357867 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
FN1-205ENST00000357867 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
FN1-205ENST00000357867 IL2RBP14784 551 aa12.84□□□□□ -0.35
FN1-205ENST00000357867 SEPT11Q9NVA2 429 aaKnown RBP12.84□□□□□ -0.35
FN1-205ENST00000357867 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
FN1-205ENST00000357867 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
FN1-205ENST00000357867 ZNF804AQ7Z570 1209 aa12.84□□□□□ -0.35
FN1-205ENST00000357867 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.35
FN1-205ENST00000357867 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.35
FN1-205ENST00000357867 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 CETN2P41208 172 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 CRNKL1Q9BZJ0 848 aaKnown RBP12.83□□□□□ -0.36
FN1-205ENST00000357867 MAST1Q9Y2H9 1570 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 VTI1AQ96AJ9 217 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
FN1-205ENST00000357867 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
FN1-205ENST00000357867 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
FN1-205ENST00000357867 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
FN1-205ENST00000357867 TSG101Q99816 390 aa12.82□□□□□ -0.36
FN1-205ENST00000357867 BOLA2Q9H3K6 86 aa12.82□□□□□ -0.36
FN1-205ENST00000357867 IL1RAPL2Q9NP60 686 aa12.82□□□□□ -0.36
FN1-205ENST00000357867 ASXL1Q8IXJ9 1541 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms