RNA–Protein interactions for RNA: ENST00000356708.11

ATP5C1-202, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-202ENST00000356708 ZBTB1Q9Y2K1 713 aa29.3■■■□□ 2.28
ATP5C1-202ENST00000356708 KCPQ6ZWJ8 1503 aa29.29■■■□□ 2.28
ATP5C1-202ENST00000356708 CNGB1Q14028 1251 aaPredicted RBP29.28■■■□□ 2.28
ATP5C1-202ENST00000356708 COL15A1P39059 1388 aa29.27■■■□□ 2.28
ATP5C1-202ENST00000356708 NFIXQ14938 502 aa29.27■■■□□ 2.28
ATP5C1-202ENST00000356708 NPC1L1Q9UHC9 1359 aa29.26■■■□□ 2.28
ATP5C1-202ENST00000356708 U2SURPO15042 1029 aaKnown RBP29.26■■■□□ 2.27
ATP5C1-202ENST00000356708 TOMM70O94826 608 aa29.26■■■□□ 2.27
ATP5C1-202ENST00000356708 TTC5Q8N0Z6 440 aa29.25■■■□□ 2.27
ATP5C1-202ENST00000356708 NMRK2Q9NPI5 230 aa29.25■■■□□ 2.27
ATP5C1-202ENST00000356708 CANXP27824 592 aaKnown RBP29.24■■■□□ 2.27
ATP5C1-202ENST00000356708 GAS2L2Q8NHY3 880 aa29.23■■■□□ 2.27
ATP5C1-202ENST00000356708 BCL2L12Q9HB09 334 aa29.23■■■□□ 2.27
ATP5C1-202ENST00000356708 STARD3NLO95772 234 aa29.22■■■□□ 2.27
ATP5C1-202ENST00000356708 SERPINB2P05120 415 aa29.22■■■□□ 2.27
ATP5C1-202ENST00000356708 COL3A1P02461 1466 aaPredicted RBP29.22■■■□□ 2.27
ATP5C1-202ENST00000356708 GNAT3A8MTJ3 354 aa29.21■■■□□ 2.27
ATP5C1-202ENST00000356708 TEFQ10587 303 aa29.21■■■□□ 2.27
ATP5C1-202ENST00000356708 IL17REQ8NFR9 667 aa29.21■■■□□ 2.27
ATP5C1-202ENST00000356708 RNF181Q9P0P0 153 aa29.21■■■□□ 2.27
ATP5C1-202ENST00000356708 AFDNP55196 1824 aaKnown RBP29.2■■■□□ 2.27
ATP5C1-202ENST00000356708 UBR2Q8IWV8 1755 aa29.2■■■□□ 2.26
ATP5C1-202ENST00000356708 APLP1P51693 650 aa29.19■■■□□ 2.26
ATP5C1-202ENST00000356708 EIF5P55010 431 aaKnown RBP29.19■■■□□ 2.26
ATP5C1-202ENST00000356708 ZNF496Q96IT1 587 aaPredicted RBP29.19■■■□□ 2.26
ATP5C1-202ENST00000356708 ZNF790Q6PG37 636 aa29.18■■■□□ 2.26
ATP5C1-202ENST00000356708 TEX13AQ9BXU3 409 aaPredicted RBP29.18■■■□□ 2.26
ATP5C1-202ENST00000356708 A0A087WZG4 1122 aa29.17■■■□□ 2.26
ATP5C1-202ENST00000356708 SBF1O95248 1867 aa29.17■■■□□ 2.26
ATP5C1-202ENST00000356708 C16orf71Q8IYS4 520 aaPredicted RBP29.16■■■□□ 2.26
ATP5C1-202ENST00000356708 NRXN2Q9P2S2 1712 aa29.16■■■□□ 2.26
ATP5C1-202ENST00000356708 KDM2BQ8NHM5 1336 aa29.16■■■□□ 2.26
ATP5C1-202ENST00000356708 HEG1Q9ULI3 1381 aa29.15■■■□□ 2.26
ATP5C1-202ENST00000356708 BICDL1Q6ZP65 573 aa29.15■■■□□ 2.26
ATP5C1-202ENST00000356708 RBM46Q8TBY0 533 aaKnown RBP29.14■■■□□ 2.26
ATP5C1-202ENST00000356708 IFFO2Q5TF58 517 aa29.13■■■□□ 2.25
ATP5C1-202ENST00000356708 C2CD5Q86YS7 1000 aa29.13■■■□□ 2.25
ATP5C1-202ENST00000356708 H0YIN7 160 aa29.12■■■□□ 2.25
ATP5C1-202ENST00000356708 TTLL6Q8N841 843 aa29.12■■■□□ 2.25
ATP5C1-202ENST00000356708 PHACTR3Q96KR7 559 aa29.12■■■□□ 2.25
ATP5C1-202ENST00000356708 CFAP53Q96M91 514 aa29.12■■■□□ 2.25
ATP5C1-202ENST00000356708 RASSF7Q02833 373 aa29.11■■■□□ 2.25
ATP5C1-202ENST00000356708 FMNL2Q96PY5 1086 aa29.11■■■□□ 2.25
ATP5C1-202ENST00000356708 ZNF330Q9Y3S2 320 aaPredicted RBP29.11■■■□□ 2.25
ATP5C1-202ENST00000356708 PRKAR2BP31323 418 aa29.1■■■□□ 2.25
ATP5C1-202ENST00000356708 TBC1D9BQ66K14 1250 aa29.1■■■□□ 2.25
ATP5C1-202ENST00000356708 RRAGCQ9HB90 399 aa29.1■■■□□ 2.25
ATP5C1-202ENST00000356708 TBC1D2BQ9UPU7 963 aa29.1■■■□□ 2.25
ATP5C1-202ENST00000356708 SIPA1L3O60292 1781 aaPredicted RBP29.09■■■□□ 2.25
ATP5C1-202ENST00000356708 IL6STP40189 918 aaPredicted RBP29.09■■■□□ 2.25
ATP5C1-202ENST00000356708 CEMIPQ8WUJ3 1361 aa29.09■■■□□ 2.25
ATP5C1-202ENST00000356708 DNAJC5GQ8N7S2 189 aa29.08■■■□□ 2.25
ATP5C1-202ENST00000356708 RSPH6AQ9H0K4 717 aa29.08■■■□□ 2.25
ATP5C1-202ENST00000356708 CARMIL3Q8ND23 1372 aa29.08■■■□□ 2.25
ATP5C1-202ENST00000356708 BTBD11A6QL63 1104 aa29.07■■■□□ 2.24
ATP5C1-202ENST00000356708 LMNB1P20700 586 aa29.07■■■□□ 2.24
ATP5C1-202ENST00000356708 NPM2Q86SE8 214 aaKnown RBP29.07■■■□□ 2.24
ATP5C1-202ENST00000356708 NUDCQ9Y266 331 aa29.07■■■□□ 2.24
ATP5C1-202ENST00000356708 DLEC1Q9Y238 1755 aa29.06■■■□□ 2.24
ATP5C1-202ENST00000356708 ZC3H4Q9UPT8 1303 aaKnown RBP29.06■■■□□ 2.24
ATP5C1-202ENST00000356708 KCNQ3O43525 872 aa29.06■■■□□ 2.24
ATP5C1-202ENST00000356708 A1BGP04217 495 aa29.06■■■□□ 2.24
ATP5C1-202ENST00000356708 FSTL1Q12841 308 aa29.06■■■□□ 2.24
ATP5C1-202ENST00000356708 BRIP1Q9BX63 1249 aa29.05■■■□□ 2.24
ATP5C1-202ENST00000356708 PDZRN3Q9UPQ7 1066 aa29.04■■■□□ 2.24
ATP5C1-202ENST00000356708 PDE6BP35913 854 aa29.03■■■□□ 2.24
ATP5C1-202ENST00000356708 PRELPP51888 382 aa29.03■■■□□ 2.24
ATP5C1-202ENST00000356708 ZNF622Q969S3 477 aaKnown RBP eCLIP29.03■■■□□ 2.243e-9■□□□□ 9
ATP5C1-202ENST00000356708 U2AF1L5P0DN76 240 aaPredicted RBP29.02■■■□□ 2.24
ATP5C1-202ENST00000356708 U2AF1Q01081 240 aaKnown RBP eCLIP29.02■■■□□ 2.241e-6■■■■□ 24.5
ATP5C1-202ENST00000356708 PRR5LQ6MZQ0 368 aa29.02■■■□□ 2.24
ATP5C1-202ENST00000356708 GLTPD2A6NH11 291 aa29.01■■■□□ 2.23
ATP5C1-202ENST00000356708 CCDC24Q8N4L8 307 aa29.01■■■□□ 2.23
ATP5C1-202ENST00000356708 SETDB2Q96T68 719 aa29.01■■■□□ 2.23
ATP5C1-202ENST00000356708 TNRC6CQ9HCJ0 1690 aaKnown RBP29■■■□□ 2.23
ATP5C1-202ENST00000356708 CAMTA2O94983 1202 aa29■■■□□ 2.23
ATP5C1-202ENST00000356708 PPP2R1AP30153 589 aa29■■■□□ 2.23
ATP5C1-202ENST00000356708 RTF1Q92541 710 aaKnown RBP29■■■□□ 2.23
ATP5C1-202ENST00000356708 USP16Q9Y5T5 823 aa29■■■□□ 2.23
ATP5C1-202ENST00000356708 CCDC88AQ3V6T2 1871 aa29■■■□□ 2.23
ATP5C1-202ENST00000356708 ANKRD31Q8N7Z5 1873 aa29■■■□□ 2.23
ATP5C1-202ENST00000356708 SCN7AQ01118 1682 aa28.99■■■□□ 2.23
ATP5C1-202ENST00000356708 NFKBIEO00221 500 aa28.99■■■□□ 2.23
ATP5C1-202ENST00000356708 MCM10Q7L590 875 aa28.98■■■□□ 2.23
ATP5C1-202ENST00000356708 DZIP3Q86Y13 1208 aaKnown RBP28.98■■■□□ 2.23
ATP5C1-202ENST00000356708 NPHP1O15259 732 aa28.97■■■□□ 2.23
ATP5C1-202ENST00000356708 CNBD1Q8NA66 436 aa28.97■■■□□ 2.23
ATP5C1-202ENST00000356708 SMC1BQ8NDV3 1235 aa28.97■■■□□ 2.23
ATP5C1-202ENST00000356708 ZNF219Q9P2Y4 722 aaPredicted RBP28.97■■■□□ 2.23
ATP5C1-202ENST00000356708 C21orf2O43822 256 aa28.96■■■□□ 2.23
ATP5C1-202ENST00000356708 VEGFAP15692 232 aaPredicted RBP28.96■■■□□ 2.23
ATP5C1-202ENST00000356708 HTRA3P83110 453 aa28.96■■■□□ 2.23
ATP5C1-202ENST00000356708 WDR90Q96KV7 1748 aa28.96■■■□□ 2.23
ATP5C1-202ENST00000356708 PRAMEF22A3QJZ6 481 aa28.95■■■□□ 2.22
ATP5C1-202ENST00000356708 SNRPA1P09661 255 aaKnown RBP28.95■■■□□ 2.22
ATP5C1-202ENST00000356708 PIP4K2AP48426 406 aaPredicted RBP28.95■■■□□ 2.22
ATP5C1-202ENST00000356708 ST5P78524 1137 aa28.93■■■□□ 2.22
ATP5C1-202ENST00000356708 CNKSR1Q969H4 720 aa28.93■■■□□ 2.22
ATP5C1-202ENST00000356708 HTATSF1O43719 755 aaKnown RBP28.92■■■□□ 2.22
ATP5C1-202ENST00000356708 DCTN1Q14203 1278 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms