RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 KCNF1Q9H3M0 494 aa19.33■□□□□ 0.69
C2CD4A-201ENST00000355522 OGFRQ9NZT2 677 aa19.33■□□□□ 0.69
C2CD4A-201ENST00000355522 LRRFIP2Q9Y608 721 aaKnown RBP19.33■□□□□ 0.69
C2CD4A-201ENST00000355522 CHMLP26374 656 aa19.33■□□□□ 0.68
C2CD4A-201ENST00000355522 CEBPZQ03701 1054 aaKnown RBP19.33■□□□□ 0.68
C2CD4A-201ENST00000355522 NUP62CLQ9H1M0 184 aa19.33■□□□□ 0.68
C2CD4A-201ENST00000355522 UHRF1BP1LA0JNW5 1464 aa19.33■□□□□ 0.68
C2CD4A-201ENST00000355522 PPFIA3O75145 1194 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 GNAI2P04899 355 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 HAP1P54257 671 aaPredicted RBP19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 GOLGA6L19H0YKK7 550 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 NECAB1Q8N987 351 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 INTS4Q96HW7 963 aaKnown RBP19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 CHMP4AQ9BY43 222 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 ABCC3O15438 1527 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 LRRC7Q96NW7 1537 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 GJB2P29033 226 aa19.32■□□□□ 0.68
C2CD4A-201ENST00000355522 MAP3K11Q16584 847 aa19.31■□□□□ 0.68
C2CD4A-201ENST00000355522 NAP1L2Q9ULW6 460 aaPredicted RBP19.31■□□□□ 0.68
C2CD4A-201ENST00000355522 F13A1P00488 732 aa19.31■□□□□ 0.68
C2CD4A-201ENST00000355522 AK2P54819 239 aa19.31■□□□□ 0.68
C2CD4A-201ENST00000355522 GORABQ5T7V8 394 aa19.31■□□□□ 0.68
C2CD4A-201ENST00000355522 AP5Z1O43299 807 aa19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 GTF2E1P29083 439 aaPredicted RBP19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 NCBP1Q09161 790 aaKnown RBP19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 CCDC66A2RUB6 948 aa19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 STK3Q13188 491 aa19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 ANO6Q4KMQ2 910 aa19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
C2CD4A-201ENST00000355522 GTF2F1P35269 517 aaKnown RBP eCLIP19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 CUL4AQ13619 759 aa19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 LARP1BQ659C4 914 aaKnown RBP19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 JAKMIP1Q96N16 626 aaKnown RBP19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 FEZ1Q99689 392 aa19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 MAP3K19Q56UN5 1328 aa19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 CD163L1Q9NR16 1453 aa19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 AIMP1Q12904 312 aaKnown RBP19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 TCEANC2Q96MN5 208 aa19.29■□□□□ 0.68
C2CD4A-201ENST00000355522 BECN2A8MW95 431 aa19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 ZBTB9Q96C00 473 aa19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 SYTL4Q96C24 671 aaPredicted RBP19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 IL25Q9H293 177 aa19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 SPTLC3Q9NUV7 552 aa19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 TNNT3P45378 269 aaPredicted RBP19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 RIMS2Q9UQ26 1411 aa19.28■□□□□ 0.68
C2CD4A-201ENST00000355522 ZNF853P0CG23 659 aa19.27■□□□□ 0.68
C2CD4A-201ENST00000355522 PIP4K2AP48426 406 aaPredicted RBP19.27■□□□□ 0.68
C2CD4A-201ENST00000355522 CEP135Q66GS9 1140 aa19.27■□□□□ 0.68
C2CD4A-201ENST00000355522 FAM200AQ8TCP9 573 aa19.27■□□□□ 0.68
C2CD4A-201ENST00000355522 DACT1Q9NYF0 836 aa19.27■□□□□ 0.68
C2CD4A-201ENST00000355522 RTL1A6NKG5 1358 aa19.27■□□□□ 0.67
C2CD4A-201ENST00000355522 TYRO3Q06418 890 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 NRXN1Q9ULB1 1477 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 TAF3Q5VWG9 929 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 VWDEQ8N2E2 1590 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 KRT85P78386 507 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 EYA1Q99502 592 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 DNAJC25Q9H1X3 360 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 SETD1BQ9UPS6 1966 aaKnown RBP19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 FRMPD1Q5SYB0 1578 aa19.26■□□□□ 0.67
C2CD4A-201ENST00000355522 PRPF40BQ6NWY9 871 aaKnown RBP19.25■□□□□ 0.67
C2CD4A-201ENST00000355522 KRT222Q8N1A0 295 aa19.25■□□□□ 0.67
C2CD4A-201ENST00000355522 DEPDC5O75140 1603 aa19.25■□□□□ 0.67
C2CD4A-201ENST00000355522 SMTNL1A8MU46 457 aa19.25■□□□□ 0.67
C2CD4A-201ENST00000355522 PTPN14Q15678 1187 aa19.25■□□□□ 0.67
C2CD4A-201ENST00000355522 PDRG1Q9NUG6 133 aa19.25■□□□□ 0.67
C2CD4A-201ENST00000355522 KCNQ3O43525 872 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 BRPF1P55201 1214 aaPredicted RBP19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 FLIIQ13045 1269 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 FAM135BQ49AJ0 1406 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 ZNF165P49910 485 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 SIL1Q9H173 461 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 PTPRMP28827 1452 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 PTCH1Q13635 1447 aa19.24■□□□□ 0.67
C2CD4A-201ENST00000355522 LIG1P18858 919 aa19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 LTKP29376 864 aa19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 ANAPC15P60006 121 aa19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 GTF3C6Q969F1 213 aa19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 ABCA9Q8IUA7 1624 aa19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 POLR3GO15318 223 aaPredicted RBP19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 ELF2Q15723 593 aa19.23■□□□□ 0.67
C2CD4A-201ENST00000355522 SIGLEC1Q9BZZ2 1709 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 CHL1O00533 1208 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 ST7Q9NRC1 585 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 NEXMIFQ5QGS0 1516 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 LARGE1O95461 756 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 HDGFL1Q5TGJ6 251 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 RASEFQ8IZ41 740 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 CBX8Q9HC52 389 aa19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 ZNF215Q9UL58 517 aaPredicted RBP19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 COL3A1P02461 1466 aaPredicted RBP19.22■□□□□ 0.67
C2CD4A-201ENST00000355522 ANKRD7Q92527 254 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms