RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 SRP68Q9UHB9 627 aaKnown RBP26.71■■□□□ 1.87
HCFC1R1-202ENST00000354679 USP42Q9H9J4 1324 aaKnown RBP26.7■■□□□ 1.87
HCFC1R1-202ENST00000354679 CD2APQ9Y5K6 639 aa26.7■■□□□ 1.86
HCFC1R1-202ENST00000354679 COL15A1P39059 1388 aa26.7■■□□□ 1.86
HCFC1R1-202ENST00000354679 CCDC146Q8IYE0 955 aa26.69■■□□□ 1.86
HCFC1R1-202ENST00000354679 CANXP27824 592 aaKnown RBP26.68■■□□□ 1.86
HCFC1R1-202ENST00000354679 THUMPD2Q9BTF0 503 aaKnown RBP26.68■■□□□ 1.86
HCFC1R1-202ENST00000354679 RIPK4P57078 832 aa26.67■■□□□ 1.86
HCFC1R1-202ENST00000354679 ADAMTS8Q9UP79 889 aa26.67■■□□□ 1.86
HCFC1R1-202ENST00000354679 UTRNP46939 3433 aa26.67■■□□□ 1.86
HCFC1R1-202ENST00000354679 ZPR1O75312 459 aa26.66■■□□□ 1.86
HCFC1R1-202ENST00000354679 TMPOP42166 694 aaKnown RBP26.66■■□□□ 1.86
HCFC1R1-202ENST00000354679 PNISRQ8TF01 805 aaKnown RBP26.66■■□□□ 1.86
HCFC1R1-202ENST00000354679 RUNDC1Q96C34 613 aa26.66■■□□□ 1.86
HCFC1R1-202ENST00000354679 MIS18AQ9NYP9 233 aa26.66■■□□□ 1.86
HCFC1R1-202ENST00000354679 GOLGB1Q14789 3259 aaKnown RBP26.64■■□□□ 1.86
HCFC1R1-202ENST00000354679 SNRPA1P09661 255 aaKnown RBP26.64■■□□□ 1.86
HCFC1R1-202ENST00000354679 FKBP8Q14318 412 aa26.64■■□□□ 1.86
HCFC1R1-202ENST00000354679 USPL1Q5W0Q7 1092 aa26.64■■□□□ 1.86
HCFC1R1-202ENST00000354679 NARFQ9UHQ1 456 aa26.64■■□□□ 1.86
HCFC1R1-202ENST00000354679 EIF5P55010 431 aaKnown RBP26.63■■□□□ 1.85
HCFC1R1-202ENST00000354679 LMOD3Q0VAK6 560 aa26.63■■□□□ 1.85
HCFC1R1-202ENST00000354679 RRP7AQ9Y3A4 280 aaKnown RBP26.63■■□□□ 1.85
HCFC1R1-202ENST00000354679 KDM3BQ7LBC6 1761 aa26.62■■□□□ 1.85
HCFC1R1-202ENST00000354679 PRAMEF22A3QJZ6 481 aa26.62■■□□□ 1.85
HCFC1R1-202ENST00000354679 A1BGP04217 495 aa26.62■■□□□ 1.85
HCFC1R1-202ENST00000354679 GPR162Q16538 588 aa26.62■■□□□ 1.85
HCFC1R1-202ENST00000354679 USP16Q9Y5T5 823 aa26.62■■□□□ 1.85
HCFC1R1-202ENST00000354679 PARP3Q9Y6F1 533 aa26.62■■□□□ 1.85
HCFC1R1-202ENST00000354679 A0A087WZG4 1122 aa26.61■■□□□ 1.85
HCFC1R1-202ENST00000354679 PELP1Q8IZL8 1130 aaKnown RBP26.61■■□□□ 1.85
HCFC1R1-202ENST00000354679 IL6STP40189 918 aaPredicted RBP26.6■■□□□ 1.85
HCFC1R1-202ENST00000354679 NEUROD2Q15784 382 aa26.6■■□□□ 1.85
HCFC1R1-202ENST00000354679 ZNF330Q9Y3S2 320 aaPredicted RBP26.6■■□□□ 1.85
HCFC1R1-202ENST00000354679 C10orf71Q711Q0 1435 aa26.58■■□□□ 1.85
HCFC1R1-202ENST00000354679 ANP32CO43423 234 aa26.58■■□□□ 1.85
HCFC1R1-202ENST00000354679 DDR1Q08345 913 aa26.58■■□□□ 1.85
HCFC1R1-202ENST00000354679 EIF4A1P60842 406 aaKnown RBP26.57■■□□□ 1.84
HCFC1R1-202ENST00000354679 NPM2Q86SE8 214 aaKnown RBP26.57■■□□□ 1.84
HCFC1R1-202ENST00000354679 BCL2L12Q9HB09 334 aa26.57■■□□□ 1.84
HCFC1R1-202ENST00000354679 TM4SF1P30408 202 aa26.56■■□□□ 1.84
HCFC1R1-202ENST00000354679 CCDC184Q52MB2 194 aa26.56■■□□□ 1.84
HCFC1R1-202ENST00000354679 PIP4K2AP48426 406 aaPredicted RBP26.55■■□□□ 1.84
HCFC1R1-202ENST00000354679 TSPYL4Q9UJ04 414 aa26.55■■□□□ 1.84
HCFC1R1-202ENST00000354679 KIF13BQ9NQT8 1826 aa26.55■■□□□ 1.84
HCFC1R1-202ENST00000354679 POLRMTO00411 1230 aaKnown RBP26.54■■□□□ 1.84
HCFC1R1-202ENST00000354679 YY1P25490 414 aa26.54■■□□□ 1.84
HCFC1R1-202ENST00000354679 TRIM35Q9UPQ4 493 aa26.54■■□□□ 1.84
HCFC1R1-202ENST00000354679 TBC1D2BQ9UPU7 963 aa26.54■■□□□ 1.84
HCFC1R1-202ENST00000354679 LAMB4A4D0S4 1761 aa26.53■■□□□ 1.84
HCFC1R1-202ENST00000354679 GIGYF1O75420 1035 aaPredicted RBP26.53■■□□□ 1.84
HCFC1R1-202ENST00000354679 YBX3P16989 372 aaKnown RBP eCLIP26.53■■□□□ 1.84
HCFC1R1-202ENST00000354679 NFIXQ14938 502 aa26.53■■□□□ 1.84
HCFC1R1-202ENST00000354679 BABAM1Q9NWV8 329 aa26.53■■□□□ 1.84
HCFC1R1-202ENST00000354679 SCN7AQ01118 1682 aa26.53■■□□□ 1.84
HCFC1R1-202ENST00000354679 PXDNLA1KZ92 1463 aa26.52■■□□□ 1.84
HCFC1R1-202ENST00000354679 TGFB2P61812 414 aa26.51■■□□□ 1.83
HCFC1R1-202ENST00000354679 NBPF26B4DH59 902 aa26.5■■□□□ 1.83
HCFC1R1-202ENST00000354679 NBPF10Q6P3W6 841 aaKnown RBP26.5■■□□□ 1.83
HCFC1R1-202ENST00000354679 DZIP3Q86Y13 1208 aaKnown RBP26.5■■□□□ 1.83
HCFC1R1-202ENST00000354679 NBPF15Q8N660 670 aa26.5■■□□□ 1.83
HCFC1R1-202ENST00000354679 KIAA1551Q9HCM1 1747 aa26.49■■□□□ 1.83
HCFC1R1-202ENST00000354679 APAF1O14727 1248 aa26.49■■□□□ 1.83
HCFC1R1-202ENST00000354679 GRIN3BO60391 1043 aa26.49■■□□□ 1.83
HCFC1R1-202ENST00000354679 CAMTA2O94983 1202 aa26.49■■□□□ 1.83
HCFC1R1-202ENST00000354679 WWC3Q9ULE0 1092 aa26.49■■□□□ 1.83
HCFC1R1-202ENST00000354679 MRS2Q9HD23 443 aa26.48■■□□□ 1.83
HCFC1R1-202ENST00000354679 BICDL1Q6ZP65 573 aa26.47■■□□□ 1.83
HCFC1R1-202ENST00000354679 N4BP2Q86UW6 1770 aaPredicted RBP26.46■■□□□ 1.83
HCFC1R1-202ENST00000354679 A0A0G2JLW4 131 aa26.46■■□□□ 1.83
HCFC1R1-202ENST00000354679 SERPINB2P05120 415 aa26.46■■□□□ 1.83
HCFC1R1-202ENST00000354679 TBC1D9BQ66K14 1250 aa26.46■■□□□ 1.83
HCFC1R1-202ENST00000354679 BCORQ6W2J9 1755 aa26.46■■□□□ 1.83
HCFC1R1-202ENST00000354679 CHD4Q14839 1912 aa26.45■■□□□ 1.83
HCFC1R1-202ENST00000354679 CHL1O00533 1208 aa26.45■■□□□ 1.82
HCFC1R1-202ENST00000354679 DPEP1P16444 411 aa26.45■■□□□ 1.82
HCFC1R1-202ENST00000354679 LAS1LQ9Y4W2 734 aaKnown RBP26.45■■□□□ 1.82
HCFC1R1-202ENST00000354679 NRXN2Q9P2S2 1712 aa26.45■■□□□ 1.82
HCFC1R1-202ENST00000354679 AFDNP55196 1824 aaKnown RBP26.44■■□□□ 1.82
HCFC1R1-202ENST00000354679 CARMIL3Q8ND23 1372 aa26.42■■□□□ 1.82
HCFC1R1-202ENST00000354679 CLEC4GQ6UXB4 293 aa26.41■■□□□ 1.82
HCFC1R1-202ENST00000354679 ERBB4Q15303 1308 aa26.4■■□□□ 1.82
HCFC1R1-202ENST00000354679 CFAP44Q96MT7 982 aa26.4■■□□□ 1.82
HCFC1R1-202ENST00000354679 SETDB2Q96T68 719 aa26.4■■□□□ 1.82
HCFC1R1-202ENST00000354679 ZNF652Q9Y2D9 606 aa26.4■■□□□ 1.82
HCFC1R1-202ENST00000354679 MYL6BP14649 208 aa26.39■■□□□ 1.82
HCFC1R1-202ENST00000354679 EIF2S2P20042 333 aaKnown RBP26.39■■□□□ 1.82
HCFC1R1-202ENST00000354679 KCNA3P22001 575 aa26.39■■□□□ 1.82
HCFC1R1-202ENST00000354679 NGEFQ8N5V2 710 aa26.39■■□□□ 1.82
HCFC1R1-202ENST00000354679 RGL2O15211 777 aa26.38■■□□□ 1.81
HCFC1R1-202ENST00000354679 CHRNA5P30532 468 aa26.38■■□□□ 1.81
HCFC1R1-202ENST00000354679 BCS1LQ9Y276 419 aa26.38■■□□□ 1.81
HCFC1R1-202ENST00000354679 CALD1Q05682 793 aaKnown RBP26.37■■□□□ 1.81
HCFC1R1-202ENST00000354679 BRCA1P38398 1863 aaKnown RBP26.36■■□□□ 1.81
HCFC1R1-202ENST00000354679 KRT24Q2M2I5 525 aa26.36■■□□□ 1.81
HCFC1R1-202ENST00000354679 PIM2Q9P1W9 311 aa26.36■■□□□ 1.81
HCFC1R1-202ENST00000354679 ZNF853P0CG23 659 aa26.35■■□□□ 1.81
HCFC1R1-202ENST00000354679 PRR5LQ6MZQ0 368 aa26.35■■□□□ 1.81
HCFC1R1-202ENST00000354679 MBIPQ9NS73 344 aa26.35■■□□□ 1.81
HCFC1R1-202ENST00000354679 IFT57Q9NWB7 429 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms