RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TM4SF1P30408 202 aa21.5■■□□□ 1.03
PDGFA-201ENST00000354513 CCDC88AQ3V6T2 1871 aa21.49■■□□□ 1.03
PDGFA-201ENST00000354513 POLRMTO00411 1230 aaKnown RBP21.49■■□□□ 1.03
PDGFA-201ENST00000354513 KIF3CO14782 793 aa21.49■■□□□ 1.03
PDGFA-201ENST00000354513 ZBTB1Q9Y2K1 713 aa21.49■■□□□ 1.03
PDGFA-201ENST00000354513 USPL1Q5W0Q7 1092 aa21.48■■□□□ 1.03
PDGFA-201ENST00000354513 BCL2L12Q9HB09 334 aa21.48■■□□□ 1.03
PDGFA-201ENST00000354513 DLG5Q8TDM6 1919 aa21.46■■□□□ 1.03
PDGFA-201ENST00000354513 FCHSD2O94868 740 aa21.46■■□□□ 1.03
PDGFA-201ENST00000354513 TIAM2Q8IVF5 1701 aa21.46■■□□□ 1.03
PDGFA-201ENST00000354513 CACNA1SQ13698 1873 aa21.46■■□□□ 1.03
PDGFA-201ENST00000354513 CNGB1Q14028 1251 aaPredicted RBP21.45■■□□□ 1.02
PDGFA-201ENST00000354513 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
PDGFA-201ENST00000354513 TNRC6CQ9HCJ0 1690 aaKnown RBP21.45■■□□□ 1.02
PDGFA-201ENST00000354513 CHRNA5P30532 468 aa21.44■■□□□ 1.02
PDGFA-201ENST00000354513 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
PDGFA-201ENST00000354513 NARFQ9UHQ1 456 aa21.44■■□□□ 1.02
PDGFA-201ENST00000354513 CARMIL3Q8ND23 1372 aa21.43■■□□□ 1.02
PDGFA-201ENST00000354513 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
PDGFA-201ENST00000354513 ARHGAP27Q6ZUM4 889 aa21.43■■□□□ 1.02
PDGFA-201ENST00000354513 U2SURPO15042 1029 aaKnown RBP21.42■■□□□ 1.02
PDGFA-201ENST00000354513 NFIXQ14938 502 aa21.42■■□□□ 1.02
PDGFA-201ENST00000354513 HEG1Q9ULI3 1381 aa21.41■■□□□ 1.02
PDGFA-201ENST00000354513 ARFGEF2Q9Y6D5 1785 aa21.41■■□□□ 1.02
PDGFA-201ENST00000354513 PIM2Q9P1W9 311 aa21.41■■□□□ 1.02
PDGFA-201ENST00000354513 WDR90Q96KV7 1748 aa21.4■■□□□ 1.02
PDGFA-201ENST00000354513 ZPR1O75312 459 aa21.4■■□□□ 1.02
PDGFA-201ENST00000354513 ZNF496Q96IT1 587 aaPredicted RBP21.4■■□□□ 1.02
PDGFA-201ENST00000354513 RSPH6AQ9H0K4 717 aa21.4■■□□□ 1.02
PDGFA-201ENST00000354513 LAMB4A4D0S4 1761 aa21.4■■□□□ 1.02
PDGFA-201ENST00000354513 GNAT3A8MTJ3 354 aa21.39■■□□□ 1.01
PDGFA-201ENST00000354513 HSPA6P17066 643 aa21.39■■□□□ 1.01
PDGFA-201ENST00000354513 GAS2L2Q8NHY3 880 aa21.39■■□□□ 1.01
PDGFA-201ENST00000354513 PHACTR3Q96KR7 559 aa21.39■■□□□ 1.01
PDGFA-201ENST00000354513 FER1L6Q2WGJ9 1857 aa21.38■■□□□ 1.01
PDGFA-201ENST00000354513 DICER1Q9UPY3 1922 aaKnown RBP21.38■■□□□ 1.01
PDGFA-201ENST00000354513 EIF5P55010 431 aaKnown RBP21.38■■□□□ 1.01
PDGFA-201ENST00000354513 KDM3BQ7LBC6 1761 aa21.37■■□□□ 1.01
PDGFA-201ENST00000354513 CANXP27824 592 aaKnown RBP21.37■■□□□ 1.01
PDGFA-201ENST00000354513 DALRD3Q5D0E6 543 aaKnown RBP21.37■■□□□ 1.01
PDGFA-201ENST00000354513 C9orf131Q5VYM1 1079 aa21.37■■□□□ 1.01
PDGFA-201ENST00000354513 ZNF790Q6PG37 636 aa21.37■■□□□ 1.01
PDGFA-201ENST00000354513 NMRK2Q9NPI5 230 aa21.37■■□□□ 1.01
PDGFA-201ENST00000354513 KCNQ3O43525 872 aa21.35■■□□□ 1.01
PDGFA-201ENST00000354513 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
PDGFA-201ENST00000354513 TEFQ10587 303 aa21.35■■□□□ 1.01
PDGFA-201ENST00000354513 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
PDGFA-201ENST00000354513 SERPINB2P05120 415 aa21.34■■□□□ 1.01
PDGFA-201ENST00000354513 PRELPP51888 382 aa21.34■■□□□ 1.01
PDGFA-201ENST00000354513 PPP2R1AP30153 589 aa21.33■■□□□ 1.01
PDGFA-201ENST00000354513 RASSF7Q02833 373 aa21.32■■□□□ 1
PDGFA-201ENST00000354513 SLX4Q8IY92 1834 aa21.32■■□□□ 1
PDGFA-201ENST00000354513 STARD3NLO95772 234 aa21.31■■□□□ 1
PDGFA-201ENST00000354513 TBC1D9BQ66K14 1250 aa21.31■■□□□ 1
PDGFA-201ENST00000354513 RNF181Q9P0P0 153 aa21.3■■□□□ 1
PDGFA-201ENST00000354513 TOMM70O94826 608 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 A1BGP04217 495 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 A0A087WZG4 1122 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 PRAMEF22A3QJZ6 481 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 IL6STP40189 918 aaPredicted RBP21.29■■□□□ 1
PDGFA-201ENST00000354513 BICDL1Q6ZP65 573 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 CFAP53Q96M91 514 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 TBC1D2BQ9UPU7 963 aa21.29■■□□□ 1
PDGFA-201ENST00000354513 CAMTA2O94983 1202 aa21.28■■□□□ 1
PDGFA-201ENST00000354513 C2CD5Q86YS7 1000 aa21.28■■□□□ 1
PDGFA-201ENST00000354513 TEX13AQ9BXU3 409 aaPredicted RBP21.28■■□□□ 1
PDGFA-201ENST00000354513 BTBD11A6QL63 1104 aa21.27■□□□□ 0.99
PDGFA-201ENST00000354513 PRR5LQ6MZQ0 368 aa21.27■□□□□ 0.99
PDGFA-201ENST00000354513 MCM10Q7L590 875 aa21.27■□□□□ 0.99
PDGFA-201ENST00000354513 NUP98P52948 1817 aa21.26■□□□□ 0.99
PDGFA-201ENST00000354513 PIP4K2AP48426 406 aaPredicted RBP21.26■□□□□ 0.99
PDGFA-201ENST00000354513 CCDC24Q8N4L8 307 aa21.26■□□□□ 0.99
PDGFA-201ENST00000354513 USP16Q9Y5T5 823 aa21.26■□□□□ 0.99
PDGFA-201ENST00000354513 NFKBIEO00221 500 aa21.25■□□□□ 0.99
PDGFA-201ENST00000354513 U2AF1L5P0DN76 240 aaPredicted RBP21.25■□□□□ 0.99
PDGFA-201ENST00000354513 U2AF1Q01081 240 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDGFA-201ENST00000354513 DCTN1Q14203 1278 aa21.25■□□□□ 0.99
PDGFA-201ENST00000354513 ZNF330Q9Y3S2 320 aaPredicted RBP21.25■□□□□ 0.99
PDGFA-201ENST00000354513 TTLL6Q8N841 843 aa21.24■□□□□ 0.99
PDGFA-201ENST00000354513 RBM46Q8TBY0 533 aaKnown RBP21.23■□□□□ 0.99
PDGFA-201ENST00000354513 NUDCQ9Y266 331 aa21.23■□□□□ 0.99
PDGFA-201ENST00000354513 H0YIN7 160 aa21.22■□□□□ 0.99
PDGFA-201ENST00000354513 DNAJC5GQ8N7S2 189 aa21.22■□□□□ 0.99
PDGFA-201ENST00000354513 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
PDGFA-201ENST00000354513 ZC3H4Q9UPT8 1303 aaKnown RBP21.21■□□□□ 0.99
PDGFA-201ENST00000354513 APLP1P51693 650 aa21.21■□□□□ 0.99
PDGFA-201ENST00000354513 BRIP1Q9BX63 1249 aa21.21■□□□□ 0.99
PDGFA-201ENST00000354513 RRAGCQ9HB90 399 aa21.21■□□□□ 0.99
PDGFA-201ENST00000354513 NBPF26B4DH59 902 aa21.2■□□□□ 0.98
PDGFA-201ENST00000354513 LMNB1P20700 586 aa21.2■□□□□ 0.98
PDGFA-201ENST00000354513 NBPF10Q6P3W6 841 aaKnown RBP21.2■□□□□ 0.98
PDGFA-201ENST00000354513 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
PDGFA-201ENST00000354513 NBPF15Q8N660 670 aa21.2■□□□□ 0.98
PDGFA-201ENST00000354513 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
PDGFA-201ENST00000354513 SNRPA1P09661 255 aaKnown RBP21.17■□□□□ 0.98
PDGFA-201ENST00000354513 PDE6BP35913 854 aa21.17■□□□□ 0.98
PDGFA-201ENST00000354513 RTF1Q92541 710 aaKnown RBP21.17■□□□□ 0.98
PDGFA-201ENST00000354513 HTRA3P83110 453 aa21.16■□□□□ 0.98
PDGFA-201ENST00000354513 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms