RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 SSH3Q8TE77 659 aa19.21■□□□□ 0.67
MBD1-205ENST00000353909 OSBPL3Q9H4L5 887 aa19.21■□□□□ 0.67
MBD1-205ENST00000353909 SLC52A2Q9HAB3 445 aa19.21■□□□□ 0.67
MBD1-205ENST00000353909 AIMP1Q12904 312 aaKnown RBP19.2■□□□□ 0.66
MBD1-205ENST00000353909 CWF19L2Q2TBE0 894 aaKnown RBP19.2■□□□□ 0.66
MBD1-205ENST00000353909 ADAMTS7Q9UKP4 1686 aa19.2■□□□□ 0.66
MBD1-205ENST00000353909 SRGAP3O43295 1099 aa19.2■□□□□ 0.66
MBD1-205ENST00000353909 PDIA6Q15084 440 aa19.19■□□□□ 0.66
MBD1-205ENST00000353909 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
MBD1-205ENST00000353909 LMTK3Q96Q04 1460 aa19.19■□□□□ 0.66
MBD1-205ENST00000353909 SURF6O75683 361 aaKnown RBP19.19■□□□□ 0.66
MBD1-205ENST00000353909 MX1P20591 662 aa19.19■□□□□ 0.66
MBD1-205ENST00000353909 USP26Q9BXU7 913 aa19.19■□□□□ 0.66
MBD1-205ENST00000353909 SPG7Q9UQ90 795 aa19.19■□□□□ 0.66
MBD1-205ENST00000353909 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
MBD1-205ENST00000353909 SNX21Q969T3 373 aa19.18■□□□□ 0.66
MBD1-205ENST00000353909 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
MBD1-205ENST00000353909 IFNL2Q8IZJ0 200 aa19.18■□□□□ 0.66
MBD1-205ENST00000353909 SCN11AQ9UI33 1791 aa19.17■□□□□ 0.66
MBD1-205ENST00000353909 POLA2Q14181 598 aa19.17■□□□□ 0.66
MBD1-205ENST00000353909 KSR2Q6VAB6 950 aa19.17■□□□□ 0.66
MBD1-205ENST00000353909 NUTM1Q86Y26 1132 aa19.17■□□□□ 0.66
MBD1-205ENST00000353909 SLAIN2Q9P270 581 aa19.17■□□□□ 0.66
MBD1-205ENST00000353909 MYL6BP14649 208 aa19.16■□□□□ 0.66
MBD1-205ENST00000353909 UNC5CLQ8IV45 518 aa19.16■□□□□ 0.66
MBD1-205ENST00000353909 FOXD4L1Q9NU39 408 aa19.16■□□□□ 0.66
MBD1-205ENST00000353909 CHMP4AQ9BY43 222 aa19.15■□□□□ 0.66
MBD1-205ENST00000353909 DDX21Q9NR30 783 aaKnown RBP eCLIP19.15■□□□□ 0.66
MBD1-205ENST00000353909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.15■□□□□ 0.661e-7■□□□□ 11
MBD1-205ENST00000353909 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
MBD1-205ENST00000353909 USP16Q9Y5T5 823 aa19.15■□□□□ 0.66
MBD1-205ENST00000353909 C5P01031 1676 aa19.14■□□□□ 0.65
MBD1-205ENST00000353909 CPDO75976 1380 aa19.14■□□□□ 0.65
MBD1-205ENST00000353909 HYPKQ9NX55 129 aa19.14■□□□□ 0.65
MBD1-205ENST00000353909 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
MBD1-205ENST00000353909 RHPN1Q8TCX5 695 aa19.13■□□□□ 0.65
MBD1-205ENST00000353909 RILPL2Q969X0 211 aa19.13■□□□□ 0.65
MBD1-205ENST00000353909 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
MBD1-205ENST00000353909 PRKCSHP14314 528 aaPredicted RBP19.13■□□□□ 0.65
MBD1-205ENST00000353909 GSE1Q14687 1217 aa19.13■□□□□ 0.65
MBD1-205ENST00000353909 TUBGCP6Q96RT7 1819 aa19.12■□□□□ 0.65
MBD1-205ENST00000353909 TRIM6-TRIM34B2RNG4 842 aa19.12■□□□□ 0.65
MBD1-205ENST00000353909 DCAF5Q96JK2 942 aa19.12■□□□□ 0.65
MBD1-205ENST00000353909 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
MBD1-205ENST00000353909 DDIT3P35638 169 aa19.12■□□□□ 0.65
MBD1-205ENST00000353909 CASC1Q6TDU7 716 aa19.12■□□□□ 0.65
MBD1-205ENST00000353909 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
MBD1-205ENST00000353909 STAP2Q9UGK3 403 aa19.12■□□□□ 0.65
MBD1-205ENST00000353909 KAZALD1Q96I82 304 aa19.11■□□□□ 0.65
MBD1-205ENST00000353909 PA2G4Q9UQ80 394 aaKnown RBP19.11■□□□□ 0.65
MBD1-205ENST00000353909 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
MBD1-205ENST00000353909 ERC2O15083 957 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 IGKV5-2P06315 115 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 TOM1L2Q6ZVM7 507 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 XAGE3Q8WTP9 111 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 K7ELQ4 463 aaPredicted RBP19.1■□□□□ 0.65
MBD1-205ENST00000353909 ALDH1L1O75891 902 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 COPS6Q7L5N1 327 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 LINS1Q8NG48 757 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 IL25Q9H293 177 aa19.1■□□□□ 0.65
MBD1-205ENST00000353909 RIC3Q7Z5B4 369 aa19.09■□□□□ 0.65
MBD1-205ENST00000353909 SUCLG2Q96I99 432 aa19.09■□□□□ 0.65
MBD1-205ENST00000353909 RAB11FIP3O75154 756 aa19.09■□□□□ 0.65
MBD1-205ENST00000353909 CABP4P57796 275 aa19.09■□□□□ 0.65
MBD1-205ENST00000353909 TTC5Q8N0Z6 440 aa19.09■□□□□ 0.65
MBD1-205ENST00000353909 WDR17Q8IZU2 1322 aa19.08■□□□□ 0.65
MBD1-205ENST00000353909 LRP10Q7Z4F1 713 aa19.08■□□□□ 0.65
MBD1-205ENST00000353909 GRM8O00222 908 aa19.08■□□□□ 0.64
MBD1-205ENST00000353909 CHMLP26374 656 aa19.08■□□□□ 0.64
MBD1-205ENST00000353909 PI4K2BQ8TCG2 481 aa19.08■□□□□ 0.64
MBD1-205ENST00000353909 JARID2Q92833 1246 aaPredicted RBP19.08■□□□□ 0.64
MBD1-205ENST00000353909 KIF1BPQ96EK5 621 aa19.08■□□□□ 0.64
MBD1-205ENST00000353909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.08■□□□□ 0.64
MBD1-205ENST00000353909 PKD1L3Q7Z443 1732 aa19.07■□□□□ 0.64
MBD1-205ENST00000353909 REC8O95072 547 aa19.07■□□□□ 0.64
MBD1-205ENST00000353909 MTX1Q13505 466 aa19.07■□□□□ 0.64
MBD1-205ENST00000353909 ESYT1Q9BSJ8 1104 aa19.07■□□□□ 0.64
MBD1-205ENST00000353909 STRN4Q9NRL3 753 aa19.07■□□□□ 0.64
MBD1-205ENST00000353909 DDX58O95786 925 aaKnown RBP19.07■□□□□ 0.64
MBD1-205ENST00000353909 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
MBD1-205ENST00000353909 BICC1Q9H694 974 aaKnown RBP19.07■□□□□ 0.64
MBD1-205ENST00000353909 RABEP1Q15276 862 aa19.06■□□□□ 0.64
MBD1-205ENST00000353909 HSP90AA1P07900 732 aaKnown RBP19.06■□□□□ 0.64
MBD1-205ENST00000353909 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
MBD1-205ENST00000353909 MYD88Q99836 296 aa19.06■□□□□ 0.64
MBD1-205ENST00000353909 MRC1P22897 1456 aa19.05■□□□□ 0.64
MBD1-205ENST00000353909 MCM4P33991 863 aa19.05■□□□□ 0.64
MBD1-205ENST00000353909 LARP1Q6PKG0 1096 aaKnown RBP19.05■□□□□ 0.64
MBD1-205ENST00000353909 ZCRB1Q8TBF4 217 aaKnown RBP19.05■□□□□ 0.64
MBD1-205ENST00000353909 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
MBD1-205ENST00000353909 COL5A2P05997 1499 aaPredicted RBP19.05■□□□□ 0.64
MBD1-205ENST00000353909 ABCC6O95255 1503 aa19.05■□□□□ 0.64
MBD1-205ENST00000353909 NEURL1BA8MQ27 555 aa19.04■□□□□ 0.64
MBD1-205ENST00000353909 KLHDC4Q8TBB5 520 aa19.04■□□□□ 0.64
MBD1-205ENST00000353909 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
MBD1-205ENST00000353909 PALD1Q9ULE6 856 aa19.04■□□□□ 0.64
MBD1-205ENST00000353909 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
MBD1-205ENST00000353909 ANKRD13DQ6ZTN6 518 aa19.03■□□□□ 0.64
MBD1-205ENST00000353909 ANO2Q9NQ90 1003 aa19.03■□□□□ 0.64
MBD1-205ENST00000353909 UTYO14607 1347 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms