RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 GPT2Q8TD30 523 aa9.54□□□□□ -0.88
PDE1A-201ENST00000351439 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
PDE1A-201ENST00000351439 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
PDE1A-201ENST00000351439 RGPD1P0DJD0 1748 aa9.54□□□□□ -0.88
PDE1A-201ENST00000351439 ACEP12821 1306 aa9.54□□□□□ -0.88
PDE1A-201ENST00000351439 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDE1A-201ENST00000351439 JARID2Q92833 1246 aaPredicted RBP9.54□□□□□ -0.88
PDE1A-201ENST00000351439 CWC22Q9HCG8 908 aaKnown RBP9.54□□□□□ -0.88
PDE1A-201ENST00000351439 MORC2Q9Y6X9 1032 aaPredicted RBP9.54□□□□□ -0.88
PDE1A-201ENST00000351439 TUBGCP6Q96RT7 1819 aa9.54□□□□□ -0.88
PDE1A-201ENST00000351439 CAPN2P17655 700 aa9.53□□□□□ -0.88
PDE1A-201ENST00000351439 MTHFSDQ2M296 383 aaKnown RBP9.53□□□□□ -0.88
PDE1A-201ENST00000351439 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
PDE1A-201ENST00000351439 DDX41Q9UJV9 622 aaKnown RBP9.53□□□□□ -0.88
PDE1A-201ENST00000351439 ROBO2Q9HCK4 1378 aa9.53□□□□□ -0.88
PDE1A-201ENST00000351439 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.53□□□□□ -0.88
PDE1A-201ENST00000351439 HMMRO75330 724 aa9.53□□□□□ -0.88
PDE1A-201ENST00000351439 NEK4P51957 841 aa9.53□□□□□ -0.88
PDE1A-201ENST00000351439 TSPYL4Q9UJ04 414 aa9.53□□□□□ -0.88
PDE1A-201ENST00000351439 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
PDE1A-201ENST00000351439 PPP6R1Q9UPN7 881 aa9.53□□□□□ -0.88
PDE1A-201ENST00000351439 MAP3K19Q56UN5 1328 aa9.52□□□□□ -0.88
PDE1A-201ENST00000351439 OVOS2A0A0J9YW53 1432 aa9.52□□□□□ -0.88
PDE1A-201ENST00000351439 OVOS2Q6IE36 1432 aa9.52□□□□□ -0.88
PDE1A-201ENST00000351439 AGLP35573 1532 aa9.52□□□□□ -0.88
PDE1A-201ENST00000351439 FMN2Q9NZ56 1722 aa9.52□□□□□ -0.89
PDE1A-201ENST00000351439 UVSSAQ2YD98 709 aa9.52□□□□□ -0.89
PDE1A-201ENST00000351439 OSBPL3Q9H4L5 887 aa9.52□□□□□ -0.89
PDE1A-201ENST00000351439 CTNNA3Q9UI47 895 aa9.52□□□□□ -0.89
PDE1A-201ENST00000351439 TECPR2O15040 1411 aa9.52□□□□□ -0.89
PDE1A-201ENST00000351439 NALCNQ8IZF0 1738 aa9.52□□□□□ -0.89
PDE1A-201ENST00000351439 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 NOL8Q76FK4 1167 aaKnown RBP9.51□□□□□ -0.89
PDE1A-201ENST00000351439 NECTIN2Q92692 538 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 TMX3Q96JJ7 454 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 TRIM34Q9BYJ4 488 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 PNMA6EA0A0J9YXQ4 647 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 PSEN1P49768 467 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
PDE1A-201ENST00000351439 RTF1Q92541 710 aaKnown RBP9.51□□□□□ -0.89
PDE1A-201ENST00000351439 SIRT1Q96EB6 747 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 TMEM63CQ9P1W3 806 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 PALD1Q9ULE6 856 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 HDAC5Q9UQL6 1122 aa9.51□□□□□ -0.89
PDE1A-201ENST00000351439 TOPAZ1Q8N9V7 1692 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 GNAI2P04899 355 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 FAM184AQ8NB25 1140 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 ZNF622Q969S3 477 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDE1A-201ENST00000351439 USP6P35125 1406 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 SALL3Q9BXA9 1300 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 SYCE3A1L190 88 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 MBD3O95983 291 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 RILPL2Q969X0 211 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 ESYT1Q9BSJ8 1104 aa9.5□□□□□ -0.89
PDE1A-201ENST00000351439 TCHHQ07283 1943 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
PDE1A-201ENST00000351439 MX1P20591 662 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 CTR9Q6PD62 1173 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 DHX37Q8IY37 1157 aaKnown RBP9.49□□□□□ -0.89
PDE1A-201ENST00000351439 LRRCC1Q9C099 1032 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 RGPD8O14715 1765 aaPredicted RBP9.49□□□□□ -0.89
PDE1A-201ENST00000351439 TPM3P06753 285 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 POTEDQ86YR6 584 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 UNC5CLQ8IV45 518 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 KRT222Q8N1A0 295 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 STK31Q9BXU1 1019 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 ANO2Q9NQ90 1003 aa9.49□□□□□ -0.89
PDE1A-201ENST00000351439 XRN1Q8IZH2 1706 aaKnown RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 USP31Q70CQ4 1352 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 CEP170BQ9Y4F5 1589 aaPredicted RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 PLEKHG3A1L390 1219 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 CHMLP26374 656 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 FLIIQ13045 1269 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 FOXD4L6Q3SYB3 417 aaPredicted RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 FOXD4L3Q6VB84 417 aaPredicted RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 FBXO41Q8TF61 875 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 FEZ2Q9UHY8 353 aaPredicted RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 ARHGEF10O15013 1369 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 HDGFP51858 240 aaKnown RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 EYA1Q99502 592 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 UPF3BQ9BZI7 483 aaKnown RBP9.48□□□□□ -0.89
PDE1A-201ENST00000351439 IL25Q9H293 177 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 TSPY26PQ9H489 355 aa9.48□□□□□ -0.89
PDE1A-201ENST00000351439 UBR1Q8IWV7 1749 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 FAM177BA6PVY3 158 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 BRD1O95696 1058 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 ATP8B2P98198 1209 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 LRRFIP2Q9Y608 721 aaKnown RBP9.47□□□□□ -0.89
PDE1A-201ENST00000351439 ADAMTS13Q76LX8 1427 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 ADAMTSL3P82987 1691 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 NCBP1Q09161 790 aaKnown RBP9.47□□□□□ -0.89
PDE1A-201ENST00000351439 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
PDE1A-201ENST00000351439 CUL4AQ13619 759 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 CERS3Q8IU89 383 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 RNF214Q8ND24 703 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 SYAP1Q96A49 352 aaPredicted RBP9.47□□□□□ -0.89
PDE1A-201ENST00000351439 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
PDE1A-201ENST00000351439 FAM53CQ9NYF3 392 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 303.9 ms