RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 KSR2Q6VAB6 950 aa28.21■■■□□ 2.11
CNTFR-201ENST00000351266 HSCBQ8IWL3 235 aa28.21■■■□□ 2.11
CNTFR-201ENST00000351266 OTUD7AQ8TE49 926 aaPredicted RBP28.21■■■□□ 2.11
CNTFR-201ENST00000351266 DDX21Q9NR30 783 aaKnown RBP eCLIP28.21■■■□□ 2.11
CNTFR-201ENST00000351266 ZNF335Q9H4Z2 1342 aaPredicted RBP28.21■■■□□ 2.11
CNTFR-201ENST00000351266 RAB11FIP3O75154 756 aa28.2■■■□□ 2.11
CNTFR-201ENST00000351266 SNX21Q969T3 373 aa28.2■■■□□ 2.11
CNTFR-201ENST00000351266 PDE1AP54750 535 aa28.2■■■□□ 2.1
CNTFR-201ENST00000351266 SDSP20132 328 aa28.19■■■□□ 2.1
CNTFR-201ENST00000351266 PRDM11Q9NQV5 511 aa28.19■■■□□ 2.1
CNTFR-201ENST00000351266 POLA2Q14181 598 aa28.18■■■□□ 2.1
CNTFR-201ENST00000351266 WDR17Q8IZU2 1322 aa28.18■■■□□ 2.1
CNTFR-201ENST00000351266 NFATC2IPQ8NCF5 419 aa28.17■■■□□ 2.1
CNTFR-201ENST00000351266 BCL11AQ9H165 835 aa28.17■■■□□ 2.1
CNTFR-201ENST00000351266 MAP3K2Q9Y2U5 619 aa28.17■■■□□ 2.1
CNTFR-201ENST00000351266 SALL3Q9BXA9 1300 aa28.16■■■□□ 2.1
CNTFR-201ENST00000351266 ANXA1P04083 346 aa28.16■■■□□ 2.1
CNTFR-201ENST00000351266 HSP90AB4PQ58FF6 505 aa28.16■■■□□ 2.1
CNTFR-201ENST00000351266 PPP1R42Q7Z4L9 355 aa28.16■■■□□ 2.1
CNTFR-201ENST00000351266 TTC5Q8N0Z6 440 aa28.16■■■□□ 2.1
CNTFR-201ENST00000351266 CYP27B1O15528 508 aa28.15■■■□□ 2.1
CNTFR-201ENST00000351266 ANTXR1Q9H6X2 564 aa28.15■■■□□ 2.1
CNTFR-201ENST00000351266 AOX1Q06278 1338 aa28.15■■■□□ 2.1
CNTFR-201ENST00000351266 PARP4Q9UKK3 1724 aaKnown RBP28.14■■■□□ 2.1
CNTFR-201ENST00000351266 NBPF7P0C2Y1 421 aaPredicted RBP28.14■■■□□ 2.09
CNTFR-201ENST00000351266 MX1P20591 662 aa28.14■■■□□ 2.09
CNTFR-201ENST00000351266 PROSER3Q2NL68 480 aa28.13■■■□□ 2.09
CNTFR-201ENST00000351266 SLKQ9H2G2 1235 aaPredicted RBP28.13■■■□□ 2.09
CNTFR-201ENST00000351266 STAP2Q9UGK3 403 aa28.13■■■□□ 2.09
CNTFR-201ENST00000351266 MTX1Q13505 466 aa28.12■■■□□ 2.09
CNTFR-201ENST00000351266 LINS1Q8NG48 757 aa28.12■■■□□ 2.09
CNTFR-201ENST00000351266 PRAMEF22A3QJZ6 481 aa28.12■■■□□ 2.09
CNTFR-201ENST00000351266 SRGAP3O43295 1099 aa28.12■■■□□ 2.09
CNTFR-201ENST00000351266 SNRPA1P09661 255 aaKnown RBP28.12■■■□□ 2.09
CNTFR-201ENST00000351266 SLC39A6Q13433 755 aa28.12■■■□□ 2.09
CNTFR-201ENST00000351266 C9orf78Q9NZ63 289 aaPredicted RBP28.12■■■□□ 2.09
CNTFR-201ENST00000351266 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
CNTFR-201ENST00000351266 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
CNTFR-201ENST00000351266 REC8O95072 547 aa28.11■■■□□ 2.09
CNTFR-201ENST00000351266 CABP4P57796 275 aa28.11■■■□□ 2.09
CNTFR-201ENST00000351266 TOM1L2Q6ZVM7 507 aa28.11■■■□□ 2.09
CNTFR-201ENST00000351266 FMNL2Q96PY5 1086 aa28.11■■■□□ 2.09
CNTFR-201ENST00000351266 COL5A2P05997 1499 aaPredicted RBP28.11■■■□□ 2.09
CNTFR-201ENST00000351266 SURF6O75683 361 aaKnown RBP28.1■■■□□ 2.09
CNTFR-201ENST00000351266 PDIA6Q15084 440 aa28.1■■■□□ 2.09
CNTFR-201ENST00000351266 KIF1BPQ96EK5 621 aa28.1■■■□□ 2.09
CNTFR-201ENST00000351266 KIF2CQ99661 725 aa28.1■■■□□ 2.09
CNTFR-201ENST00000351266 DEKP35659 375 aaKnown RBP28.08■■■□□ 2.09
CNTFR-201ENST00000351266 LARP1Q6PKG0 1096 aaKnown RBP28.08■■■□□ 2.09
CNTFR-201ENST00000351266 ZCRB1Q8TBF4 217 aaKnown RBP28.08■■■□□ 2.09
CNTFR-201ENST00000351266 ZNF496Q96IT1 587 aaPredicted RBP28.08■■■□□ 2.09
CNTFR-201ENST00000351266 NHSL1Q5SYE7 1610 aa28.07■■■□□ 2.08
CNTFR-201ENST00000351266 C5P01031 1676 aa28.07■■■□□ 2.08
CNTFR-201ENST00000351266 ABCA3Q99758 1704 aa28.07■■■□□ 2.08
CNTFR-201ENST00000351266 CARD10Q9BWT7 1032 aa28.07■■■□□ 2.08
CNTFR-201ENST00000351266 USP26Q9BXU7 913 aa28.07■■■□□ 2.08
CNTFR-201ENST00000351266 UTYO14607 1347 aa28.07■■■□□ 2.08
CNTFR-201ENST00000351266 ERC2O15083 957 aa28.06■■■□□ 2.08
CNTFR-201ENST00000351266 NEXNQ0ZGT2 675 aa28.06■■■□□ 2.08
CNTFR-201ENST00000351266 RHPN1Q8TCX5 695 aa28.06■■■□□ 2.08
CNTFR-201ENST00000351266 RIC3Q7Z5B4 369 aa28.05■■■□□ 2.08
CNTFR-201ENST00000351266 CHMP5Q9NZZ3 219 aa28.05■■■□□ 2.08
CNTFR-201ENST00000351266 RABEP1Q15276 862 aa28.04■■■□□ 2.08
CNTFR-201ENST00000351266 ERVV-2B6SEH9 535 aa28.04■■■□□ 2.08
CNTFR-201ENST00000351266 GRM8O00222 908 aa28.04■■■□□ 2.08
CNTFR-201ENST00000351266 IL2RBP14784 551 aa28.03■■■□□ 2.08
CNTFR-201ENST00000351266 AIMP1Q12904 312 aaKnown RBP28.03■■■□□ 2.08
CNTFR-201ENST00000351266 FRAT2O75474 233 aaPredicted RBP28.02■■■□□ 2.08
CNTFR-201ENST00000351266 ERBB4Q15303 1308 aa28.02■■■□□ 2.08
CNTFR-201ENST00000351266 ERC1Q8IUD2 1116 aa28.02■■■□□ 2.08
CNTFR-201ENST00000351266 NKX1-1Q15270 411 aaPredicted RBP28.01■■■□□ 2.07
CNTFR-201ENST00000351266 CWF19L2Q2TBE0 894 aaKnown RBP28.01■■■□□ 2.07
CNTFR-201ENST00000351266 TUBGCP6Q96RT7 1819 aa28■■■□□ 2.07
CNTFR-201ENST00000351266 XAGE3Q8WTP9 111 aa28■■■□□ 2.07
CNTFR-201ENST00000351266 MYL6BP14649 208 aa28■■■□□ 2.07
CNTFR-201ENST00000351266 IL1RAPL2Q9NP60 686 aa28■■■□□ 2.07
CNTFR-201ENST00000351266 EVA1CP58658 441 aa27.99■■■□□ 2.07
CNTFR-201ENST00000351266 COPS6Q7L5N1 327 aa27.99■■■□□ 2.07
CNTFR-201ENST00000351266 METTL22Q9BUU2 404 aaPredicted RBP27.99■■■□□ 2.07
CNTFR-201ENST00000351266 TRIM6-TRIM34B2RNG4 842 aa27.98■■■□□ 2.07
CNTFR-201ENST00000351266 K7ELQ4 463 aaPredicted RBP27.98■■■□□ 2.07
CNTFR-201ENST00000351266 USP16Q9Y5T5 823 aa27.98■■■□□ 2.07
CNTFR-201ENST00000351266 LAMB4A4D0S4 1761 aa27.98■■■□□ 2.07
CNTFR-201ENST00000351266 OS9Q13438 667 aaPredicted RBP27.98■■■□□ 2.07
CNTFR-201ENST00000351266 ANKRD13DQ6ZTN6 518 aa27.98■■■□□ 2.07
CNTFR-201ENST00000351266 CIZ1Q9ULV3 898 aaPredicted RBP27.97■■■□□ 2.07
CNTFR-201ENST00000351266 SPRYD3Q8NCJ5 442 aa27.96■■■□□ 2.07
CNTFR-201ENST00000351266 LRP10Q7Z4F1 713 aa27.96■■■□□ 2.07
CNTFR-201ENST00000351266 RILPL2Q969X0 211 aa27.96■■■□□ 2.07
CNTFR-201ENST00000351266 TTC41PQ6P2S7 1318 aa27.95■■■□□ 2.07
CNTFR-201ENST00000351266 USP42Q9H9J4 1324 aaKnown RBP27.95■■■□□ 2.07
CNTFR-201ENST00000351266 NEURL1BA8MQ27 555 aa27.95■■■□□ 2.06
CNTFR-201ENST00000351266 EPB41L2O43491 1005 aaKnown RBP27.95■■■□□ 2.06
CNTFR-201ENST00000351266 IGKV5-2P06315 115 aa27.95■■■□□ 2.06
CNTFR-201ENST00000351266 TSHZ3Q63HK5 1081 aa27.95■■■□□ 2.06
CNTFR-201ENST00000351266 CLASRPQ8N2M8 674 aaKnown RBP27.95■■■□□ 2.06
CNTFR-201ENST00000351266 ESYT1Q9BSJ8 1104 aa27.95■■■□□ 2.06
CNTFR-201ENST00000351266 NUTM1Q86Y26 1132 aa27.94■■■□□ 2.06
CNTFR-201ENST00000351266 CHMLP26374 656 aa27.94■■■□□ 2.06
CNTFR-201ENST00000351266 SUCLG2Q96I99 432 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms