RNA–Protein interactions for RNA: ENST00000351079.8

COPE-203, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-203ENST00000351079 ZEB1P37275 1124 aaPredicted RBP24.85■■□□□ 1.57
COPE-203ENST00000351079 PIM2Q9P1W9 311 aa24.85■■□□□ 1.57
COPE-203ENST00000351079 NUDCQ9Y266 331 aa24.85■■□□□ 1.57
COPE-203ENST00000351079 CANXP27824 592 aaKnown RBP24.84■■□□□ 1.57
COPE-203ENST00000351079 DDX10Q13206 875 aaKnown RBP24.84■■□□□ 1.57
COPE-203ENST00000351079 NARFQ9UHQ1 456 aa24.84■■□□□ 1.57
COPE-203ENST00000351079 PPP2R1AP30153 589 aa24.83■■□□□ 1.57
COPE-203ENST00000351079 PRKAR2BP31323 418 aa24.83■■□□□ 1.57
COPE-203ENST00000351079 DALRD3Q5D0E6 543 aaKnown RBP24.83■■□□□ 1.57
COPE-203ENST00000351079 TM4SF1P30408 202 aa24.82■■□□□ 1.56
COPE-203ENST00000351079 IL17REQ8NFR9 667 aa24.82■■□□□ 1.56
COPE-203ENST00000351079 KCNA3P22001 575 aa24.81■■□□□ 1.56
COPE-203ENST00000351079 NFIXQ14938 502 aa24.81■■□□□ 1.56
COPE-203ENST00000351079 ZNF790Q6PG37 636 aa24.81■■□□□ 1.56
COPE-203ENST00000351079 CHRNA5P30532 468 aa24.8■■□□□ 1.56
COPE-203ENST00000351079 ZNF496Q96IT1 587 aaPredicted RBP24.8■■□□□ 1.56
COPE-203ENST00000351079 RSPH6AQ9H0K4 717 aa24.8■■□□□ 1.56
COPE-203ENST00000351079 HEG1Q9ULI3 1381 aa24.8■■□□□ 1.56
COPE-203ENST00000351079 A0A087WZG4 1122 aa24.79■■□□□ 1.56
COPE-203ENST00000351079 U2AF1L5P0DN76 240 aaPredicted RBP24.79■■□□□ 1.56
COPE-203ENST00000351079 U2AF1Q01081 240 aaKnown RBP eCLIP24.79■■□□□ 1.56
COPE-203ENST00000351079 TEX13AQ9BXU3 409 aaPredicted RBP24.79■■□□□ 1.56
COPE-203ENST00000351079 ZNF330Q9Y3S2 320 aaPredicted RBP24.79■■□□□ 1.56
COPE-203ENST00000351079 UBR2Q8IWV8 1755 aa24.79■■□□□ 1.56
COPE-203ENST00000351079 FMNL2Q96PY5 1086 aa24.78■■□□□ 1.56
COPE-203ENST00000351079 VIRMAQ69YN4 1812 aaKnown RBP24.77■■□□□ 1.56
COPE-203ENST00000351079 NPM2Q86SE8 214 aaKnown RBP24.77■■□□□ 1.56
COPE-203ENST00000351079 PHACTR3Q96KR7 559 aa24.77■■□□□ 1.56
COPE-203ENST00000351079 RTF1Q92541 710 aaKnown RBP24.76■■□□□ 1.55
COPE-203ENST00000351079 CEMIPQ8WUJ3 1361 aa24.76■■□□□ 1.55
COPE-203ENST00000351079 BTBD11A6QL63 1104 aa24.75■■□□□ 1.55
COPE-203ENST00000351079 SERPINB2P05120 415 aa24.75■■□□□ 1.55
COPE-203ENST00000351079 EIF5P55010 431 aaKnown RBP24.75■■□□□ 1.55
COPE-203ENST00000351079 C9orf131Q5VYM1 1079 aa24.75■■□□□ 1.55
COPE-203ENST00000351079 BICDL1Q6ZP65 573 aa24.75■■□□□ 1.55
COPE-203ENST00000351079 BCL2L12Q9HB09 334 aa24.75■■□□□ 1.55
COPE-203ENST00000351079 KIF3CO14782 793 aa24.74■■□□□ 1.55
COPE-203ENST00000351079 BRCA1P38398 1863 aaKnown RBP24.74■■□□□ 1.55
COPE-203ENST00000351079 HSPA6P17066 643 aa24.72■■□□□ 1.55
COPE-203ENST00000351079 RNF181Q9P0P0 153 aa24.72■■□□□ 1.55
COPE-203ENST00000351079 IL6STP40189 918 aaPredicted RBP24.7■■□□□ 1.54
COPE-203ENST00000351079 ARFGEF1Q9Y6D6 1849 aa24.7■■□□□ 1.54
COPE-203ENST00000351079 MCM10Q7L590 875 aa24.69■■□□□ 1.54
COPE-203ENST00000351079 C2CD5Q86YS7 1000 aa24.69■■□□□ 1.54
COPE-203ENST00000351079 TBC1D2BQ9UPU7 963 aa24.69■■□□□ 1.54
COPE-203ENST00000351079 SIPA1L3O60292 1781 aaPredicted RBP24.69■■□□□ 1.54
COPE-203ENST00000351079 CARMIL3Q8ND23 1372 aa24.68■■□□□ 1.54
COPE-203ENST00000351079 KCNQ3O43525 872 aa24.68■■□□□ 1.54
COPE-203ENST00000351079 NEFMP07197 916 aa24.68■■□□□ 1.54
COPE-203ENST00000351079 TBC1D9BQ66K14 1250 aa24.68■■□□□ 1.54
COPE-203ENST00000351079 SCN7AQ01118 1682 aa24.67■■□□□ 1.54
COPE-203ENST00000351079 H0YIN7 160 aa24.67■■□□□ 1.54
COPE-203ENST00000351079 NPHP1O15259 732 aa24.67■■□□□ 1.54
COPE-203ENST00000351079 A1BGP04217 495 aa24.67■■□□□ 1.54
COPE-203ENST00000351079 TTLL6Q8N841 843 aa24.67■■□□□ 1.54
COPE-203ENST00000351079 NMRK2Q9NPI5 230 aa24.67■■□□□ 1.54
COPE-203ENST00000351079 NRXN2Q9P2S2 1712 aa24.66■■□□□ 1.54
COPE-203ENST00000351079 KDM2BQ8NHM5 1336 aa24.66■■□□□ 1.54
COPE-203ENST00000351079 C16orf71Q8IYS4 520 aaPredicted RBP24.66■■□□□ 1.54
COPE-203ENST00000351079 CEP350Q5VT06 3117 aa24.66■■□□□ 1.54
COPE-203ENST00000351079 TOMM70O94826 608 aa24.65■■□□□ 1.54
COPE-203ENST00000351079 RASSF7Q02833 373 aa24.64■■□□□ 1.54
COPE-203ENST00000351079 RALBP1Q15311 655 aa24.64■■□□□ 1.54
COPE-203ENST00000351079 DZIP3Q86Y13 1208 aaKnown RBP24.64■■□□□ 1.54
COPE-203ENST00000351079 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
COPE-203ENST00000351079 HTATSF1O43719 755 aaKnown RBP24.63■■□□□ 1.53
COPE-203ENST00000351079 SNRPA1P09661 255 aaKnown RBP24.63■■□□□ 1.53
COPE-203ENST00000351079 DCTN1Q14203 1278 aa24.63■■□□□ 1.53
COPE-203ENST00000351079 CNBD1Q8NA66 436 aa24.63■■□□□ 1.53
COPE-203ENST00000351079 SETDB2Q96T68 719 aa24.63■■□□□ 1.53
COPE-203ENST00000351079 CAMTA2O94983 1202 aa24.62■■□□□ 1.53
COPE-203ENST00000351079 PDE6BP35913 854 aa24.62■■□□□ 1.53
COPE-203ENST00000351079 BRIP1Q9BX63 1249 aa24.62■■□□□ 1.53
COPE-203ENST00000351079 PDZRN3Q9UPQ7 1066 aa24.62■■□□□ 1.53
COPE-203ENST00000351079 PIP4K2AP48426 406 aaPredicted RBP24.61■■□□□ 1.53
COPE-203ENST00000351079 PRR5LQ6MZQ0 368 aa24.61■■□□□ 1.53
COPE-203ENST00000351079 ZNF622Q969S3 477 aaKnown RBP eCLIP24.61■■□□□ 1.53
COPE-203ENST00000351079 USP16Q9Y5T5 823 aa24.61■■□□□ 1.53
COPE-203ENST00000351079 LMNB1P20700 586 aa24.6■■□□□ 1.53
COPE-203ENST00000351079 ST5P78524 1137 aa24.6■■□□□ 1.53
COPE-203ENST00000351079 CCDC24Q8N4L8 307 aa24.6■■□□□ 1.53
COPE-203ENST00000351079 ZC3H4Q9UPT8 1303 aaKnown RBP24.6■■□□□ 1.53
COPE-203ENST00000351079 PRAMEF22A3QJZ6 481 aa24.59■■□□□ 1.53
COPE-203ENST00000351079 ZNF652Q9Y2D9 606 aa24.59■■□□□ 1.53
COPE-203ENST00000351079 DLEC1Q9Y238 1755 aa24.58■■□□□ 1.53
COPE-203ENST00000351079 APLP1P51693 650 aa24.58■■□□□ 1.53
COPE-203ENST00000351079 TAF7Q15545 349 aaPredicted RBP24.57■■□□□ 1.52
COPE-203ENST00000351079 RBM46Q8TBY0 533 aaKnown RBP24.57■■□□□ 1.52
COPE-203ENST00000351079 NBPF5PQ86XG9 351 aaPredicted RBP24.55■■□□□ 1.52
COPE-203ENST00000351079 ZNF219Q9P2Y4 722 aaPredicted RBP24.55■■□□□ 1.52
COPE-203ENST00000351079 MAPK8IP3Q9UPT6 1336 aa24.55■■□□□ 1.52
COPE-203ENST00000351079 CLEC4GQ6UXB4 293 aa24.54■■□□□ 1.52
COPE-203ENST00000351079 PNISRQ8TF01 805 aaKnown RBP24.54■■□□□ 1.52
COPE-203ENST00000351079 RRAGCQ9HB90 399 aa24.54■■□□□ 1.52
COPE-203ENST00000351079 BCORQ6W2J9 1755 aa24.53■■□□□ 1.52
COPE-203ENST00000351079 ZNF316A6NFI3 1004 aaPredicted RBP24.53■■□□□ 1.52
COPE-203ENST00000351079 NFKBIEO00221 500 aa24.53■■□□□ 1.52
COPE-203ENST00000351079 PNNQ9H307 717 aaKnown RBP24.53■■□□□ 1.52
COPE-203ENST00000351079 MIS18AQ9NYP9 233 aa24.53■■□□□ 1.52
COPE-203ENST00000351079 MYBBP1AQ9BQG0 1328 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms