RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 MMS22LQ6ZRQ5 1243 aa8.15□□□□□ -1.1
MSR1-202ENST00000350896 RRP15Q9Y3B9 282 aaKnown RBP8.15□□□□□ -1.1
MSR1-202ENST00000350896 MAGI1Q96QZ7 1491 aaPredicted RBP8.15□□□□□ -1.11
MSR1-202ENST00000350896 AOX1Q06278 1338 aa8.15□□□□□ -1.11
MSR1-202ENST00000350896 ATP6V1AP38606 617 aa8.15□□□□□ -1.11
MSR1-202ENST00000350896 ZNF75DP51815 510 aa8.15□□□□□ -1.11
MSR1-202ENST00000350896 RPAP2Q8IXW5 612 aaPredicted RBP8.15□□□□□ -1.11
MSR1-202ENST00000350896 TMEM57Q8N5G2 664 aa8.15□□□□□ -1.11
MSR1-202ENST00000350896 TBC1D22AQ8WUA7 517 aa8.15□□□□□ -1.11
MSR1-202ENST00000350896 DDX19AQ9NUU7 478 aaKnown RBP8.15□□□□□ -1.11
MSR1-202ENST00000350896 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 DEPDC5O75140 1603 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 NRDCO43847 1150 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 PLA2G4AP47712 749 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 SYT10Q6XYQ8 523 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 FBXO3Q9UK99 471 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 LRRFIP2Q9Y608 721 aaKnown RBP8.14□□□□□ -1.11
MSR1-202ENST00000350896 FRMPD1Q5SYB0 1578 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 CDK12Q9NYV4 1490 aaPredicted RBP8.14□□□□□ -1.11
MSR1-202ENST00000350896 EFCAB8A8MWE9 144 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 PPP1R12AO14974 1030 aaPredicted RBP8.14□□□□□ -1.11
MSR1-202ENST00000350896 HCLS1P14317 486 aaPredicted RBP8.14□□□□□ -1.11
MSR1-202ENST00000350896 TUBB2AQ13885 445 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 ANKRD45Q5TZF3 282 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
MSR1-202ENST00000350896 TUBB2BQ9BVA1 445 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 IFT57Q9NWB7 429 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 SLC52A1Q9NWF4 448 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 POTEB2H3BUK9 544 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 CORO7P57737 925 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 PKP1Q13835 747 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 LEKR1Q6ZMV7 388 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 KRBA2Q6ZNG9 492 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 FCHSD1Q86WN1 690 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 EGFL6Q8IUX8 553 aa8.14□□□□□ -1.11
MSR1-202ENST00000350896 HNRNPLLQ8WVV9 542 aaKnown RBP8.14□□□□□ -1.11
MSR1-202ENST00000350896 ZNF215Q9UL58 517 aaPredicted RBP8.14□□□□□ -1.11
MSR1-202ENST00000350896 TTC41PQ6P2S7 1318 aa8.13□□□□□ -1.11
MSR1-202ENST00000350896 ZSCAN22P10073 491 aaPredicted RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 ZGPATQ8N5A5 531 aaKnown RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 API5Q9BZZ5 524 aaKnown RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 CXorf56Q9H5V9 222 aa8.13□□□□□ -1.11
MSR1-202ENST00000350896 TET3O43151 1660 aa8.13□□□□□ -1.11
MSR1-202ENST00000350896 GLI2P10070 1586 aa8.13□□□□□ -1.11
MSR1-202ENST00000350896 COL3A1P02461 1466 aaPredicted RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 ZCCHC11Q5TAX3 1644 aaKnown RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 GSPT1P15170 499 aaKnown RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 ERC1Q8IUD2 1116 aa8.13□□□□□ -1.11
MSR1-202ENST00000350896 YTHDC2Q9H6S0 1430 aaKnown RBP8.13□□□□□ -1.11
MSR1-202ENST00000350896 HECW2Q9P2P5 1572 aa8.13□□□□□ -1.11
MSR1-202ENST00000350896 IGSF3O75054 1194 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
MSR1-202ENST00000350896 MAP3K11Q16584 847 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 GPR161Q8N6U8 529 aaKnown RBP8.12□□□□□ -1.11
MSR1-202ENST00000350896 CCDC191Q8NCU4 936 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 OSBPL5Q9H0X9 879 aaPredicted RBP8.12□□□□□ -1.11
MSR1-202ENST00000350896 NOB1Q9ULX3 412 aaKnown RBP8.12□□□□□ -1.11
MSR1-202ENST00000350896 CTAGE5O15320 804 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 NEFHP12036 1026 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 LRRC8AQ8IWT6 810 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 ERBB3P21860 1342 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 A0A087WUV0 522 aaPredicted RBP8.12□□□□□ -1.11
MSR1-202ENST00000350896 LOC102724159A0A0B4J2E5 919 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 ERICH4A6NGS2 130 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 PWP2Q15269 919 aaKnown RBP8.12□□□□□ -1.11
MSR1-202ENST00000350896 C11orf91Q3C1V1 193 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 CCDC150Q8NCX0 1101 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 FOXD4L1Q9NU39 408 aa8.12□□□□□ -1.11
MSR1-202ENST00000350896 A6NNZ2 444 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 GIGYF1O75420 1035 aaPredicted RBP8.11□□□□□ -1.11
MSR1-202ENST00000350896 ZNF853P0CG23 659 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 LIG1P18858 919 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 PTGS1P23219 599 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 CLCN6P51797 869 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 BRD3Q15059 726 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 TUBB8Q3ZCM7 444 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 CCAR2Q8N163 923 aaKnown RBP8.11□□□□□ -1.11
MSR1-202ENST00000350896 ADGRB1O14514 1584 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 CPSF1Q10570 1443 aaKnown RBP8.11□□□□□ -1.11
MSR1-202ENST00000350896 GOLGA6L9A6NEM1 432 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 CCDC186Q7Z3E2 898 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 C16orf45Q96MC5 204 aaPredicted RBP8.11□□□□□ -1.11
MSR1-202ENST00000350896 DNAI1Q9UI46 699 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 VWDEQ8N2E2 1590 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 MYO1BO43795 1136 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 ZKSCAN8Q15776 578 aaPredicted RBP8.11□□□□□ -1.11
MSR1-202ENST00000350896 SAMD1Q6SPF0 538 aaPredicted RBP8.11□□□□□ -1.11
MSR1-202ENST00000350896 NFATC2IPQ8NCF5 419 aa8.11□□□□□ -1.11
MSR1-202ENST00000350896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.11□□□□□ -1.11
MSR1-202ENST00000350896 AEBP2Q6ZN18 517 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 ZSCAN31Q96LW9 406 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 PLEKHF1Q96S99 279 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 ZSCAN16Q9H4T2 348 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 ORC3Q9UBD5 711 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 ZFYVE9O95405 1425 aa8.1□□□□□ -1.11
MSR1-202ENST00000350896 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
MSR1-202ENST00000350896 SSR1P43307 286 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms