RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, human

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
H2AFV-204	ENST00000350771	TEX13A	Q9BXU3	409 aa	Predicted RBP	34.01	■■■■□ 3.03
H2AFV-204	ENST00000350771	RTCB	Q9Y3I0	505 aa	Known RBP	34.01	■■■■□ 3.03
H2AFV-204	ENST00000350771	C4A	P0C0L4	1744 aa		33.99	■■■■□ 3.03
H2AFV-204	ENST00000350771	CHD4	Q14839	1912 aa		33.99	■■■■□ 3.03
H2AFV-204	ENST00000350771	CCDC87	Q9NVE4	849 aa		33.99	■■■■□ 3.03
H2AFV-204	ENST00000350771	MIS18A	Q9NYP9	233 aa		33.99	■■■■□ 3.03
H2AFV-204	ENST00000350771	PHF14	O94880	888 aa		33.98	■■■■□ 3.03
H2AFV-204	ENST00000350771	SMIM5	Q71RC9	77 aa		33.98	■■■■□ 3.03
H2AFV-204	ENST00000350771	STARD3NL	O95772	234 aa		33.96	■■■■□ 3.03
H2AFV-204	ENST00000350771	NCBP3	Q53F19	620 aa	Known RBP	33.96	■■■■□ 3.03
H2AFV-204	ENST00000350771	LAMB4	A4D0S4	1761 aa		33.94	■■■■□ 3.02
H2AFV-204	ENST00000350771	SNRPA1	P09661	255 aa	Known RBP	33.94	■■■■□ 3.02
H2AFV-204	ENST00000350771	TRAPPC3L	Q5T215	181 aa		33.94	■■■■□ 3.02
H2AFV-204	ENST00000350771	SOS1	Q07889	1333 aa	Predicted RBP	33.94	■■■■□ 3.02
H2AFV-204	ENST00000350771	EIF4A1	P60842	406 aa	Known RBP	33.93	■■■■□ 3.02
H2AFV-204	ENST00000350771	KLHL34	Q8N239	644 aa		33.93	■■■■□ 3.02
H2AFV-204	ENST00000350771	ZBTB1	Q9Y2K1	713 aa		33.93	■■■■□ 3.02
H2AFV-204	ENST00000350771	CCER2	I3L3R5	266 aa		33.92	■■■■□ 3.02
H2AFV-204	ENST00000350771	ARHGEF1	Q92888	912 aa	Known RBP	33.92	■■■■□ 3.02
H2AFV-204	ENST00000350771	CHL1	O00533	1208 aa		33.91	■■■■□ 3.02
H2AFV-204	ENST00000350771	CCDC27	Q2M243	656 aa		33.91	■■■■□ 3.02
H2AFV-204	ENST00000350771	TSPYL4	Q9UJ04	414 aa		33.91	■■■■□ 3.02
H2AFV-204	ENST00000350771	DIEXF	Q68CQ4	756 aa	Known RBP	33.9	■■■■□ 3.02
H2AFV-204	ENST00000350771	PRAMEF22	A3QJZ6	481 aa		33.89	■■■■□ 3.02
H2AFV-204	ENST00000350771	USP16	Q9Y5T5	823 aa		33.89	■■■■□ 3.02
H2AFV-204	ENST00000350771	GIGYF1	O75420	1035 aa	Predicted RBP	33.88	■■■■□ 3.01
H2AFV-204	ENST00000350771	COL15A1	P39059	1388 aa		33.86	■■■■□ 3.01
H2AFV-204	ENST00000350771	ZNF853	P0CG23	659 aa		33.86	■■■■□ 3.01
H2AFV-204	ENST00000350771	EIF5	P55010	431 aa	Known RBP	33.86	■■■■□ 3.01
H2AFV-204	ENST00000350771	FAM9B	Q8IZU0	186 aa		33.86	■■■■□ 3.01
H2AFV-204	ENST00000350771	CFAP44	Q96MT7	982 aa		33.86	■■■■□ 3.01
H2AFV-204	ENST00000350771	RFC4	P35249	363 aa		33.85	■■■■□ 3.01
H2AFV-204	ENST00000350771	CALD1	Q05682	793 aa	Known RBP	33.85	■■■■□ 3.01
H2AFV-204	ENST00000350771	GPR162	Q16538	588 aa		33.85	■■■■□ 3.01
H2AFV-204	ENST00000350771	USP42	Q9H9J4	1324 aa	Known RBP	33.84	■■■■□ 3.01
H2AFV-204	ENST00000350771	MSL1	Q68DK7	614 aa		33.84	■■■■□ 3.01
H2AFV-204	ENST00000350771	A1BG	P04217	495 aa		33.83	■■■■□ 3.01
H2AFV-204	ENST00000350771	IL6ST	P40189	918 aa	Predicted RBP	33.83	■■■■□ 3.01
H2AFV-204	ENST00000350771	GYS1	P13807	737 aa		33.82	■■■■□ 3
H2AFV-204	ENST00000350771	CANX	P27824	592 aa	Known RBP	33.82	■■■■□ 3
H2AFV-204	ENST00000350771	IFT57	Q9NWB7	429 aa		33.82	■■■■□ 3
H2AFV-204	ENST00000350771	WWC1	Q8IX03	1113 aa		33.81	■■■■□ 3
H2AFV-204	ENST00000350771	NLGN1	Q8N2Q7	840 aa		33.79	■■■■□ 3
H2AFV-204	ENST00000350771	NGEF	Q8N5V2	710 aa		33.78	■■■■□ 3
H2AFV-204	ENST00000350771	NARF	Q9UHQ1	456 aa		33.78	■■■■□ 3
H2AFV-204	ENST00000350771		A0A087WZG4	1122 aa		33.77	■■■■□ 3
H2AFV-204	ENST00000350771	GNAI1	P63096	354 aa		33.77	■■■■□ 3
H2AFV-204	ENST00000350771	NLGN2	Q8NFZ4	835 aa		33.77	■■■■□ 3
H2AFV-204	ENST00000350771	SRP68	Q9UHB9	627 aa	Known RBP	33.77	■■■■□ 3
H2AFV-204	ENST00000350771	SCN7A	Q01118	1682 aa		33.77	■■■■□ 3
H2AFV-204	ENST00000350771	NBPF26	B4DH59	902 aa		33.76	■■■□□ 2.99
H2AFV-204	ENST00000350771	NBPF10	Q6P3W6	841 aa	Known RBP	33.76	■■■□□ 2.99
H2AFV-204	ENST00000350771	NBPF15	Q8N660	670 aa		33.76	■■■□□ 2.99
H2AFV-204	ENST00000350771	MBIP	Q9NS73	344 aa		33.76	■■■□□ 2.99
H2AFV-204	ENST00000350771	LAS1L	Q9Y4W2	734 aa	Known RBP	33.76	■■■□□ 2.99
H2AFV-204	ENST00000350771	PELP1	Q8IZL8	1130 aa	Known RBP	33.75	■■■□□ 2.99
H2AFV-204	ENST00000350771	CD2AP	Q9Y5K6	639 aa		33.75	■■■□□ 2.99
H2AFV-204	ENST00000350771	IL16	Q14005	1332 aa		33.74	■■■□□ 2.99
H2AFV-204	ENST00000350771	ERBB4	Q15303	1308 aa		33.74	■■■□□ 2.99
H2AFV-204	ENST00000350771	UTRN	P46939	3433 aa		33.73	■■■□□ 2.99
H2AFV-204	ENST00000350771	ZPR1	O75312	459 aa		33.73	■■■□□ 2.99
H2AFV-204	ENST00000350771	BCOR	Q6W2J9	1755 aa		33.72	■■■□□ 2.99
H2AFV-204	ENST00000350771	FKBP8	Q14318	412 aa		33.72	■■■□□ 2.99
H2AFV-204	ENST00000350771	USPL1	Q5W0Q7	1092 aa		33.72	■■■□□ 2.99
H2AFV-204	ENST00000350771	SENP3-EIF4A1	A0A087X0R7	540 aa		33.71	■■■□□ 2.99
H2AFV-204	ENST00000350771	HOXB7	P09629	217 aa		33.71	■■■□□ 2.99
H2AFV-204	ENST00000350771	MIER1	Q8N108	512 aa		33.71	■■■□□ 2.99
H2AFV-204	ENST00000350771	BCL2L12	Q9HB09	334 aa		33.71	■■■□□ 2.99
H2AFV-204	ENST00000350771	MMP10	P09238	476 aa		33.7	■■■□□ 2.99
H2AFV-204	ENST00000350771	PIP4K2A	P48426	406 aa	Predicted RBP	33.7	■■■□□ 2.99
H2AFV-204	ENST00000350771	KRT24	Q2M2I5	525 aa		33.69	■■■□□ 2.98
H2AFV-204	ENST00000350771	GRIN3B	O60391	1043 aa		33.68	■■■□□ 2.98
H2AFV-204	ENST00000350771	WDR63	Q8IWG1	891 aa		33.68	■■■□□ 2.98
H2AFV-204	ENST00000350771	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.68	■■■□□ 2.98
H2AFV-204	ENST00000350771	RGL2	O15211	777 aa		33.66	■■■□□ 2.98
H2AFV-204	ENST00000350771	TM4SF1	P30408	202 aa		33.66	■■■□□ 2.98
H2AFV-204	ENST00000350771	KIF13B	Q9NQT8	1826 aa		33.65	■■■□□ 2.98
H2AFV-204	ENST00000350771	CAMTA2	O94983	1202 aa		33.65	■■■□□ 2.98
H2AFV-204	ENST00000350771	NPM2	Q86SE8	214 aa	Known RBP	33.65	■■■□□ 2.98
H2AFV-204	ENST00000350771	TBC1D2B	Q9UPU7	963 aa		33.65	■■■□□ 2.98
H2AFV-204	ENST00000350771	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.65	■■■□□ 2.98
H2AFV-204	ENST00000350771	ZNF521	Q96K83	1311 aa		33.64	■■■□□ 2.98
H2AFV-204	ENST00000350771	PDIA6	Q15084	440 aa		33.64	■■■□□ 2.98
H2AFV-204	ENST00000350771	LRP10	Q7Z4F1	713 aa		33.64	■■■□□ 2.98
H2AFV-204	ENST00000350771	DZIP3	Q86Y13	1208 aa	Known RBP	33.64	■■■□□ 2.98
H2AFV-204	ENST00000350771	NRXN2	Q9P2S2	1712 aa		33.62	■■■□□ 2.97
H2AFV-204	ENST00000350771	DDR1	Q08345	913 aa		33.62	■■■□□ 2.97
H2AFV-204	ENST00000350771	EIF2S2	P20042	333 aa	Known RBP	33.61	■■■□□ 2.97
H2AFV-204	ENST00000350771	DUSP27	Q5VZP5	1158 aa		33.61	■■■□□ 2.97
H2AFV-204	ENST00000350771	SALL2	Q9Y467	1007 aa	Predicted RBP	33.61	■■■□□ 2.97
H2AFV-204	ENST00000350771	POLRMT	O00411	1230 aa	Known RBP	33.6	■■■□□ 2.97
H2AFV-204	ENST00000350771	NFIX	Q14938	502 aa		33.6	■■■□□ 2.97
H2AFV-204	ENST00000350771	C10orf71	Q711Q0	1435 aa		33.6	■■■□□ 2.97
H2AFV-204	ENST00000350771	GOLGB1	Q14789	3259 aa	Known RBP	33.59	■■■□□ 2.97
H2AFV-204	ENST00000350771	YBX3	P16989	372 aa	Known RBP eCLIP	33.59	■■■□□ 2.97
H2AFV-204	ENST00000350771	CLEC4G	Q6UXB4	293 aa		33.59	■■■□□ 2.97
H2AFV-204	ENST00000350771	PARP3	Q9Y6F1	533 aa		33.59	■■■□□ 2.97
H2AFV-204	ENST00000350771	AFDN	P55196	1824 aa	Known RBP	33.58	■■■□□ 2.97
H2AFV-204	ENST00000350771	TSR2	Q969E8	191 aa	Known RBP	33.58	■■■□□ 2.97
H2AFV-204	ENST00000350771	C8orf58	Q8NAV2	365 aa		33.57	■■■□□ 2.96

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms