RNA–Protein interactions for RNA: ENST00000348332.7

NCOA1-202, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA1, Length 6,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-202ENST00000348332 AKAP4Q5JQC9 854 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 RRP12Q5JTH9 1297 aaKnown RBP5.07□□□□□ -1.6
NCOA1-202ENST00000348332 MAP3K19Q56UN5 1328 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 SSH2Q76I76 1423 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 FAM184AQ8NB25 1140 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 TMOD2Q9NZR1 351 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 PDZRN3Q9UPQ7 1066 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 PXDNQ92626 1479 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 UQCRHLA0A096LP55 91 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 SLC27A3Q5K4L6 730 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 SULT6B1Q6IMI4 303 aa5.07□□□□□ -1.6
NCOA1-202ENST00000348332 PPP2R1AP30153 589 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 NAP1L1P55209 391 aaKnown RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 TRDNQ13061 729 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 LRRFIP1Q32MZ4 808 aaKnown RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 SPATA31A1Q5TZJ5 1347 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 CCAR2Q8N163 923 aaKnown RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 STK11IPQ8N1F8 1099 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 HSP90AB3PQ58FF7 597 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 KIF6Q6ZMV9 814 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 CHMP4CQ96CF2 233 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 NCAPD2Q15021 1401 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 APBA3O96018 575 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 RRS1Q15050 365 aaKnown RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 CPLX2Q6PUV4 134 aaKnown RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 SETD1AO15047 1707 aaKnown RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 ERBB3P21860 1342 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 FAM83GA6ND36 823 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 ELL2O00472 640 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 HMMRO75330 724 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 RILPL2Q969X0 211 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 NEUROD6Q96NK8 337 aa5.06□□□□□ -1.6
NCOA1-202ENST00000348332 CIZ1Q9ULV3 898 aaPredicted RBP5.06□□□□□ -1.6
NCOA1-202ENST00000348332 HSP90AB4PQ58FF6 505 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 DDX17Q92841 729 aaKnown RBP5.05□□□□□ -1.6
NCOA1-202ENST00000348332 PDCL3Q9H2J4 239 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 MAP3K5Q99683 1374 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 FOXD4L5Q5VV16 416 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-202ENST00000348332 FOXD4L4Q8WXT5 416 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-202ENST00000348332 BBXQ8WY36 941 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-202ENST00000348332 ZNF428Q96B54 188 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 NAP1L5Q96NT1 182 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-202ENST00000348332 ARID3AQ99856 593 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 FOSBP53539 338 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 HOMER1Q86YM7 354 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 KIF16BQ96L93 1317 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 FMNL2Q96PY5 1086 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 RRP7AQ9Y3A4 280 aaKnown RBP5.05□□□□□ -1.6
NCOA1-202ENST00000348332 KIF3AQ9Y496 699 aa5.05□□□□□ -1.6
NCOA1-202ENST00000348332 CPLX1O14810 134 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 ZPR1O75312 459 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 TNNT3P45378 269 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 NFE2L2Q16236 605 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 WASHC4Q2M389 1173 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 RIC3Q7Z5B4 369 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 OFD1O75665 1012 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 KRT18P05783 430 aaKnown RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 TRIM21P19474 475 aaKnown RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 POLKQ9UBT6 870 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 TPM1P09493 284 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 CT47B1P0C2W7 299 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 SLC16A10Q8TF71 515 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 PRKRIP1Q9H875 184 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 ZNF408Q9H9D4 720 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 COL16A1Q07092 1604 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 LARP1Q6PKG0 1096 aaKnown RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 ZHX3Q9H4I2 956 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 FAM208AQ9UK61 1670 aaKnown RBP5.04□□□□□ -1.6
NCOA1-202ENST00000348332 PRKAR2BP31323 418 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 LRSAM1Q6UWE0 723 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 BCL2L13Q9BXK5 485 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 BIRC2Q13490 618 aa5.04□□□□□ -1.6
NCOA1-202ENST00000348332 COL22A1Q8NFW1 1626 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 ATRNO75882 1429 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 TAF7Q15545 349 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 SLIT3O75094 1523 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 NWD2Q9ULI1 1742 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 SYCP1Q15431 976 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 TSPYL4Q9UJ04 414 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 EMILIN1Q9Y6C2 1016 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 ADRA2BP18089 450 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 RIPK4P57078 832 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 EIF4A2Q14240 407 aaKnown RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 FOXD4L6Q3SYB3 417 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 FOXD4L3Q6VB84 417 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 IPO7O95373 1038 aaKnown RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 RDXP35241 583 aaKnown RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 CDK5RAP3Q96JB5 506 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 RTCBQ9Y3I0 505 aaKnown RBP5.03□□□□□ -1.6
NCOA1-202ENST00000348332 ANKRD62A6NC57 917 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 ZNF622Q969S3 477 aaKnown RBP eCLIP5.03□□□□□ -1.69e-7■■■□□ 16.8
NCOA1-202ENST00000348332 KIF20BQ96Q89 1820 aa5.03□□□□□ -1.6
NCOA1-202ENST00000348332 BTBD11A6QL63 1104 aa5.02□□□□□ -1.61
NCOA1-202ENST00000348332 GPR162Q16538 588 aa5.02□□□□□ -1.61
NCOA1-202ENST00000348332 CCDC30Q5VVM6 783 aa5.02□□□□□ -1.61
NCOA1-202ENST00000348332 CCNL1Q9UK58 526 aaPredicted RBP5.02□□□□□ -1.61
NCOA1-202ENST00000348332 ERBB4Q15303 1308 aa5.02□□□□□ -1.61
NCOA1-202ENST00000348332 KAT6BQ8WYB5 2073 aa5.02□□□□□ -1.61
NCOA1-202ENST00000348332 SOCS7O14512 581 aa5.02□□□□□ -1.61
NCOA1-202ENST00000348332 SUPT16HQ9Y5B9 1047 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms