RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 STX1AQ16623 288 aa19.4■□□□□ 0.7
AP3D1-201ENST00000345016 AIDAQ96BJ3 306 aa19.4■□□□□ 0.7
AP3D1-201ENST00000345016 ZSWIM4Q9H7M6 989 aa19.4■□□□□ 0.7
AP3D1-201ENST00000345016 PAXBP1Q9Y5B6 917 aa19.4■□□□□ 0.7
AP3D1-201ENST00000345016 SMARCC1Q92922 1105 aaPredicted RBP19.4■□□□□ 0.7
AP3D1-201ENST00000345016 LMAN1P49257 510 aa19.4■□□□□ 0.7
AP3D1-201ENST00000345016 CNNM3Q8NE01 707 aa19.4■□□□□ 0.7
AP3D1-201ENST00000345016 CCDC186Q7Z3E2 898 aa19.39■□□□□ 0.69
AP3D1-201ENST00000345016 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.69
AP3D1-201ENST00000345016 PRIM1P49642 420 aaKnown RBP19.39■□□□□ 0.69
AP3D1-201ENST00000345016 KRT222Q8N1A0 295 aa19.39■□□□□ 0.69
AP3D1-201ENST00000345016 LRP2BPQ9P2M1 347 aa19.39■□□□□ 0.69
AP3D1-201ENST00000345016 RPGRIP1LQ68CZ1 1315 aa19.38■□□□□ 0.69
AP3D1-201ENST00000345016 NUCB1Q02818 461 aa19.38■□□□□ 0.69
AP3D1-201ENST00000345016 ZRSR2Q15696 482 aaKnown RBP19.38■□□□□ 0.69
AP3D1-201ENST00000345016 EMILIN1Q9Y6C2 1016 aa19.38■□□□□ 0.69
AP3D1-201ENST00000345016 CAVIN2O95810 425 aa19.38■□□□□ 0.69
AP3D1-201ENST00000345016 HMGB1P09429 215 aaKnown RBP19.38■□□□□ 0.69
AP3D1-201ENST00000345016 DNA2P51530 1060 aa19.38■□□□□ 0.69
AP3D1-201ENST00000345016 GNG11P61952 73 aa19.38■□□□□ 0.69
AP3D1-201ENST00000345016 NUDT16Q96DE0 195 aaKnown RBP19.37■□□□□ 0.69
AP3D1-201ENST00000345016 PPFIA3O75145 1194 aa19.37■□□□□ 0.69
AP3D1-201ENST00000345016 SDSP20132 328 aa19.37■□□□□ 0.69
AP3D1-201ENST00000345016 ISM2Q6H9L7 571 aa19.37■□□□□ 0.69
AP3D1-201ENST00000345016 ECHDC1Q9NTX5 307 aa19.37■□□□□ 0.69
AP3D1-201ENST00000345016 PAFAH1B1P43034 410 aa19.37■□□□□ 0.69
AP3D1-201ENST00000345016 MCM3P25205 808 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
AP3D1-201ENST00000345016 LUZP1Q86V48 1076 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 SLC26A8Q96RN1 970 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 NUP88Q99567 741 aaPredicted RBP19.36■□□□□ 0.69
AP3D1-201ENST00000345016 ZSCAN22P10073 491 aaPredicted RBP19.36■□□□□ 0.69
AP3D1-201ENST00000345016 TIGD1Q96MW7 591 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 STRN4Q9NRL3 753 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 ABCF2Q9UG63 623 aa19.36■□□□□ 0.69
AP3D1-201ENST00000345016 IPO4Q8TEX9 1081 aaKnown RBP19.35■□□□□ 0.69
AP3D1-201ENST00000345016 CCDC113Q9H0I3 377 aa19.35■□□□□ 0.69
AP3D1-201ENST00000345016 SKILP12757 684 aa19.35■□□□□ 0.69
AP3D1-201ENST00000345016 FLIIQ13045 1269 aa19.35■□□□□ 0.69
AP3D1-201ENST00000345016 RNF187Q5TA31 235 aaPredicted RBP19.35■□□□□ 0.69
AP3D1-201ENST00000345016 LARP1Q6PKG0 1096 aaKnown RBP19.35■□□□□ 0.69
AP3D1-201ENST00000345016 USP48Q86UV5 1035 aa19.35■□□□□ 0.69
AP3D1-201ENST00000345016 DYDC1Q8WWB3 177 aa19.35■□□□□ 0.69
AP3D1-201ENST00000345016 DNAAF4Q8WXU2 420 aa19.35■□□□□ 0.69
AP3D1-201ENST00000345016 CNPY2Q9Y2B0 182 aa19.35■□□□□ 0.69
AP3D1-201ENST00000345016 SNX21Q969T3 373 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 MAP3K1Q13233 1512 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 CACNA2D4Q7Z3S7 1137 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 NME9Q86XW9 330 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 FAM200AQ8TCP9 573 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 GOLGA8BA8MQT2 603 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 FKBP15Q5T1M5 1219 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 TMEM132AQ24JP5 1023 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 NECAB1Q8N987 351 aa19.34■□□□□ 0.69
AP3D1-201ENST00000345016 POLR3DP05423 398 aaPredicted RBP19.33■□□□□ 0.69
AP3D1-201ENST00000345016 ZFP91Q96JP5 570 aaPredicted RBP19.33■□□□□ 0.69
AP3D1-201ENST00000345016 METTL24Q5JXM2 366 aa19.33■□□□□ 0.69
AP3D1-201ENST00000345016 CCDC12Q8WUD4 166 aaPredicted RBP19.33■□□□□ 0.69
AP3D1-201ENST00000345016 GRIN2BQ13224 1484 aa19.33■□□□□ 0.68
AP3D1-201ENST00000345016 CCDC196A0A1B0GTZ2 297 aa19.33■□□□□ 0.68
AP3D1-201ENST00000345016 GOLGA6L9A6NEM1 432 aa19.33■□□□□ 0.68
AP3D1-201ENST00000345016 EVI5LQ96CN4 794 aa19.33■□□□□ 0.68
AP3D1-201ENST00000345016 YEATS4O95619 227 aa19.33■□□□□ 0.68
AP3D1-201ENST00000345016 PTPRCP08575 1304 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 CCDC171Q6TFL3 1326 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 ANKRD18AQ8IVF6 992 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 CNKSR2Q8WXI2 1034 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 FAM107BQ9H098 131 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 MAP2K1Q02750 393 aaPredicted RBP19.32■□□□□ 0.68
AP3D1-201ENST00000345016 SPECC1Q5M775 1068 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 NAPBQ9H115 298 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.32■□□□□ 0.68
AP3D1-201ENST00000345016 V9GYY5 206 aaPredicted RBP19.32■□□□□ 0.68
AP3D1-201ENST00000345016 ANO6Q4KMQ2 910 aa19.32■□□□□ 0.68
AP3D1-201ENST00000345016 POTEB2H3BUK9 544 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 USO1O60763 962 aaKnown RBP19.31■□□□□ 0.68
AP3D1-201ENST00000345016 IGSF3O75054 1194 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 SEC24BO95487 1268 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 CCDC150Q8NCX0 1101 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 DNAI1Q9UI46 699 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 ZNF213O14771 459 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 USP16Q9Y5T5 823 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 IFFO1Q0D2I5 559 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 CTR9Q6PD62 1173 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 TCEANC2Q96MN5 208 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 DACT1Q9NYF0 836 aa19.31■□□□□ 0.68
AP3D1-201ENST00000345016 ORC3Q9UBD5 711 aaPredicted RBP19.31■□□□□ 0.68
AP3D1-201ENST00000345016 EZRP15311 586 aaKnown RBP19.3■□□□□ 0.68
AP3D1-201ENST00000345016 MBIPQ9NS73 344 aa19.3■□□□□ 0.68
AP3D1-201ENST00000345016 RAB3GAP1Q15042 981 aa19.3■□□□□ 0.68
AP3D1-201ENST00000345016 PPP1R42Q7Z4L9 355 aa19.3■□□□□ 0.68
AP3D1-201ENST00000345016 MYD88Q99836 296 aa19.3■□□□□ 0.68
AP3D1-201ENST00000345016 TDRD12Q587J7 1177 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms