RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 DDR1Q08345 913 aa23.89■■□□□ 1.42
USF2-202ENST00000343550 VSIG10Q8N0Z9 540 aa23.89■■□□□ 1.42
USF2-202ENST00000343550 PNNQ9H307 717 aaKnown RBP23.89■■□□□ 1.42
USF2-202ENST00000343550 SOS1Q07889 1333 aaPredicted RBP23.89■■□□□ 1.42
USF2-202ENST00000343550 KIAA1551Q9HCM1 1747 aa23.89■■□□□ 1.42
USF2-202ENST00000343550 ADAMTS7Q9UKP4 1686 aa23.88■■□□□ 1.41
USF2-202ENST00000343550 N4BP2Q86UW6 1770 aaPredicted RBP23.88■■□□□ 1.41
USF2-202ENST00000343550 KCNA3P22001 575 aa23.88■■□□□ 1.41
USF2-202ENST00000343550 TM4SF1P30408 202 aa23.88■■□□□ 1.41
USF2-202ENST00000343550 USPL1Q5W0Q7 1092 aa23.88■■□□□ 1.41
USF2-202ENST00000343550 KCPQ6ZWJ8 1503 aa23.88■■□□□ 1.41
USF2-202ENST00000343550 ANP32CO43423 234 aa23.87■■□□□ 1.41
USF2-202ENST00000343550 NEFMP07197 916 aa23.87■■□□□ 1.41
USF2-202ENST00000343550 ZBTB1Q9Y2K1 713 aa23.86■■□□□ 1.41
USF2-202ENST00000343550 POLRMTO00411 1230 aaKnown RBP23.85■■□□□ 1.41
USF2-202ENST00000343550 ARHGAP27Q6ZUM4 889 aa23.85■■□□□ 1.41
USF2-202ENST00000343550 TTC5Q8N0Z6 440 aa23.85■■□□□ 1.41
USF2-202ENST00000343550 VIRMAQ69YN4 1812 aaKnown RBP23.85■■□□□ 1.41
USF2-202ENST00000343550 TEFQ10587 303 aa23.84■■□□□ 1.41
USF2-202ENST00000343550 PIM2Q9P1W9 311 aa23.84■■□□□ 1.41
USF2-202ENST00000343550 NARFQ9UHQ1 456 aa23.84■■□□□ 1.41
USF2-202ENST00000343550 WDR43Q15061 677 aaKnown RBP eCLIP23.84■■□□□ 1.41
USF2-202ENST00000343550 ADAMTS8Q9UP79 889 aa23.84■■□□□ 1.41
USF2-202ENST00000343550 COL15A1P39059 1388 aa23.83■■□□□ 1.41
USF2-202ENST00000343550 HTATSF1O43719 755 aaKnown RBP23.83■■□□□ 1.41
USF2-202ENST00000343550 STARD3NLO95772 234 aa23.83■■□□□ 1.41
USF2-202ENST00000343550 CEMIPQ8WUJ3 1361 aa23.82■■□□□ 1.4
USF2-202ENST00000343550 CCDC184Q52MB2 194 aa23.82■■□□□ 1.4
USF2-202ENST00000343550 ZNF790Q6PG37 636 aa23.82■■□□□ 1.4
USF2-202ENST00000343550 RTF1Q92541 710 aaKnown RBP23.82■■□□□ 1.4
USF2-202ENST00000343550 CANXP27824 592 aaKnown RBP23.81■■□□□ 1.4
USF2-202ENST00000343550 NFIXQ14938 502 aa23.81■■□□□ 1.4
USF2-202ENST00000343550 NFE2L2Q16236 605 aa23.81■■□□□ 1.4
USF2-202ENST00000343550 ZNF496Q96IT1 587 aaPredicted RBP23.81■■□□□ 1.4
USF2-202ENST00000343550 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
USF2-202ENST00000343550 DALRD3Q5D0E6 543 aaKnown RBP23.8■■□□□ 1.4
USF2-202ENST00000343550 MCM10Q7L590 875 aa23.8■■□□□ 1.4
USF2-202ENST00000343550 CHRNA5P30532 468 aa23.79■■□□□ 1.4
USF2-202ENST00000343550 DCTN1Q14203 1278 aa23.79■■□□□ 1.4
USF2-202ENST00000343550 BCL2L12Q9HB09 334 aa23.79■■□□□ 1.4
USF2-202ENST00000343550 TEX13AQ9BXU3 409 aaPredicted RBP23.79■■□□□ 1.4
USF2-202ENST00000343550 UBR2Q8IWV8 1755 aa23.78■■□□□ 1.4
USF2-202ENST00000343550 EIF5P55010 431 aaKnown RBP23.78■■□□□ 1.4
USF2-202ENST00000343550 HEG1Q9ULI3 1381 aa23.78■■□□□ 1.4
USF2-202ENST00000343550 BRCA1P38398 1863 aaKnown RBP23.78■■□□□ 1.4
USF2-202ENST00000343550 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
USF2-202ENST00000343550 KIF3CO14782 793 aa23.76■■□□□ 1.39
USF2-202ENST00000343550 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
USF2-202ENST00000343550 A0A087WZG4 1122 aa23.75■■□□□ 1.39
USF2-202ENST00000343550 SERPINB2P05120 415 aa23.75■■□□□ 1.39
USF2-202ENST00000343550 FMNL2Q96PY5 1086 aa23.75■■□□□ 1.39
USF2-202ENST00000343550 DLG5Q8TDM6 1919 aa23.75■■□□□ 1.39
USF2-202ENST00000343550 TMPOP42166 694 aaKnown RBP23.74■■□□□ 1.39
USF2-202ENST00000343550 CEP350Q5VT06 3117 aa23.74■■□□□ 1.39
USF2-202ENST00000343550 BTBD11A6QL63 1104 aa23.74■■□□□ 1.39
USF2-202ENST00000343550 RIPK4P57078 832 aa23.74■■□□□ 1.39
USF2-202ENST00000343550 C9orf131Q5VYM1 1079 aa23.74■■□□□ 1.39
USF2-202ENST00000343550 SIPA1L3O60292 1781 aaPredicted RBP23.73■■□□□ 1.39
USF2-202ENST00000343550 KCNQ3O43525 872 aa23.72■■□□□ 1.39
USF2-202ENST00000343550 TAF7Q15545 349 aaPredicted RBP23.72■■□□□ 1.39
USF2-202ENST00000343550 BICDL1Q6ZP65 573 aa23.72■■□□□ 1.39
USF2-202ENST00000343550 PNISRQ8TF01 805 aaKnown RBP23.72■■□□□ 1.39
USF2-202ENST00000343550 ARFGEF1Q9Y6D6 1849 aa23.71■■□□□ 1.39
USF2-202ENST00000343550 HSPA6P17066 643 aa23.71■■□□□ 1.39
USF2-202ENST00000343550 MRS2Q9HD23 443 aa23.71■■□□□ 1.39
USF2-202ENST00000343550 ZNF330Q9Y3S2 320 aaPredicted RBP23.71■■□□□ 1.39
USF2-202ENST00000343550 A1BGP04217 495 aa23.7■■□□□ 1.38
USF2-202ENST00000343550 IL6STP40189 918 aaPredicted RBP23.7■■□□□ 1.38
USF2-202ENST00000343550 TBC1D2BQ9UPU7 963 aa23.7■■□□□ 1.38
USF2-202ENST00000343550 THUMPD2Q9BTF0 503 aaKnown RBP23.69■■□□□ 1.38
USF2-202ENST00000343550 RRP7AQ9Y3A4 280 aaKnown RBP23.69■■□□□ 1.38
USF2-202ENST00000343550 NRXN2Q9P2S2 1712 aa23.69■■□□□ 1.38
USF2-202ENST00000343550 NEUROD2Q15784 382 aa23.69■■□□□ 1.38
USF2-202ENST00000343550 TBC1D9BQ66K14 1250 aa23.69■■□□□ 1.38
USF2-202ENST00000343550 AFDNP55196 1824 aaKnown RBP23.68■■□□□ 1.38
USF2-202ENST00000343550 NPM2Q86SE8 214 aaKnown RBP23.68■■□□□ 1.38
USF2-202ENST00000343550 C2CD5Q86YS7 1000 aa23.67■■□□□ 1.38
USF2-202ENST00000343550 NMRK2Q9NPI5 230 aa23.67■■□□□ 1.38
USF2-202ENST00000343550 MIS18AQ9NYP9 233 aa23.67■■□□□ 1.38
USF2-202ENST00000343550 RNF181Q9P0P0 153 aa23.67■■□□□ 1.38
USF2-202ENST00000343550 H0YIN7 160 aa23.66■■□□□ 1.38
USF2-202ENST00000343550 TOMM70O94826 608 aa23.66■■□□□ 1.38
USF2-202ENST00000343550 USP16Q9Y5T5 823 aa23.66■■□□□ 1.38
USF2-202ENST00000343550 LMOD3Q0VAK6 560 aa23.65■■□□□ 1.38
USF2-202ENST00000343550 TTLL6Q8N841 843 aa23.65■■□□□ 1.38
USF2-202ENST00000343550 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
USF2-202ENST00000343550 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
USF2-202ENST00000343550 APAF1O14727 1248 aa23.64■■□□□ 1.37
USF2-202ENST00000343550 CAMTA2O94983 1202 aa23.64■■□□□ 1.37
USF2-202ENST00000343550 PRAMEF22A3QJZ6 481 aa23.63■■□□□ 1.37
USF2-202ENST00000343550 SNRPA1P09661 255 aaKnown RBP23.63■■□□□ 1.37
USF2-202ENST00000343550 BRIP1Q9BX63 1249 aa23.63■■□□□ 1.37
USF2-202ENST00000343550 DZIP3Q86Y13 1208 aaKnown RBP23.62■■□□□ 1.37
USF2-202ENST00000343550 SETDB2Q96T68 719 aa23.62■■□□□ 1.37
USF2-202ENST00000343550 KDM2BQ8NHM5 1336 aa23.61■■□□□ 1.37
USF2-202ENST00000343550 PDE6BP35913 854 aa23.61■■□□□ 1.37
USF2-202ENST00000343550 PIP4K2AP48426 406 aaPredicted RBP23.61■■□□□ 1.37
USF2-202ENST00000343550 RASSF7Q02833 373 aa23.61■■□□□ 1.37
USF2-202ENST00000343550 PRR5LQ6MZQ0 368 aa23.61■■□□□ 1.37
USF2-202ENST00000343550 CCDC24Q8N4L8 307 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms