RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 AFDNP55196 1824 aaKnown RBP13.59□□□□□ -0.23
SNRPD2-201ENST00000342669 POLRMTO00411 1230 aaKnown RBP13.58□□□□□ -0.24
SNRPD2-201ENST00000342669 TTC5Q8N0Z6 440 aa13.58□□□□□ -0.24
SNRPD2-201ENST00000342669 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
SNRPD2-201ENST00000342669 COL15A1P39059 1388 aa13.58□□□□□ -0.24
SNRPD2-201ENST00000342669 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
SNRPD2-201ENST00000342669 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
SNRPD2-201ENST00000342669 KIF3CO14782 793 aa13.57□□□□□ -0.24
SNRPD2-201ENST00000342669 STARD3NLO95772 234 aa13.57□□□□□ -0.24
SNRPD2-201ENST00000342669 HSPA6P17066 643 aa13.57□□□□□ -0.24
SNRPD2-201ENST00000342669 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
SNRPD2-201ENST00000342669 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
SNRPD2-201ENST00000342669 CHRNA5P30532 468 aa13.56□□□□□ -0.24
SNRPD2-201ENST00000342669 TEFQ10587 303 aa13.56□□□□□ -0.24
SNRPD2-201ENST00000342669 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
SNRPD2-201ENST00000342669 SBF1O95248 1867 aa13.55□□□□□ -0.24
SNRPD2-201ENST00000342669 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
SNRPD2-201ENST00000342669 NFIXQ14938 502 aa13.55□□□□□ -0.24
SNRPD2-201ENST00000342669 C9orf131Q5VYM1 1079 aa13.55□□□□□ -0.24
SNRPD2-201ENST00000342669 CFAP53Q96M91 514 aa13.55□□□□□ -0.24
SNRPD2-201ENST00000342669 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
SNRPD2-201ENST00000342669 A0A087WZG4 1122 aa13.54□□□□□ -0.24
SNRPD2-201ENST00000342669 IL17REQ8NFR9 667 aa13.54□□□□□ -0.24
SNRPD2-201ENST00000342669 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
SNRPD2-201ENST00000342669 TOMM70O94826 608 aa13.53□□□□□ -0.24
SNRPD2-201ENST00000342669 SERPINB2P05120 415 aa13.53□□□□□ -0.24
SNRPD2-201ENST00000342669 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
SNRPD2-201ENST00000342669 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
SNRPD2-201ENST00000342669 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
SNRPD2-201ENST00000342669 BCL2L12Q9HB09 334 aa13.52□□□□□ -0.25
SNRPD2-201ENST00000342669 RNF181Q9P0P0 153 aa13.52□□□□□ -0.25
SNRPD2-201ENST00000342669 NUDCQ9Y266 331 aa13.52□□□□□ -0.25
SNRPD2-201ENST00000342669 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.25
SNRPD2-201ENST00000342669 DLEC1Q9Y238 1755 aa13.52□□□□□ -0.25
SNRPD2-201ENST00000342669 CCDC88AQ3V6T2 1871 aa13.51□□□□□ -0.25
SNRPD2-201ENST00000342669 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
SNRPD2-201ENST00000342669 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
SNRPD2-201ENST00000342669 NMRK2Q9NPI5 230 aa13.51□□□□□ -0.25
SNRPD2-201ENST00000342669 KDM2BQ8NHM5 1336 aa13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 H0YIN7 160 aa13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 BICDL1Q6ZP65 573 aa13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 C2CD5Q86YS7 1000 aa13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 C16orf71Q8IYS4 520 aaPredicted RBP13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 ZNF330Q9Y3S2 320 aaPredicted RBP13.5□□□□□ -0.25
SNRPD2-201ENST00000342669 CEMIPQ8WUJ3 1361 aa13.49□□□□□ -0.25
SNRPD2-201ENST00000342669 BTBD11A6QL63 1104 aa13.49□□□□□ -0.25
SNRPD2-201ENST00000342669 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
SNRPD2-201ENST00000342669 APLP1P51693 650 aa13.49□□□□□ -0.25
SNRPD2-201ENST00000342669 TTLL6Q8N841 843 aa13.49□□□□□ -0.25
SNRPD2-201ENST00000342669 SCN7AQ01118 1682 aa13.48□□□□□ -0.25
SNRPD2-201ENST00000342669 U2AF1L5P0DN76 240 aaPredicted RBP13.48□□□□□ -0.25
SNRPD2-201ENST00000342669 U2AF1Q01081 240 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNRPD2-201ENST00000342669 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
SNRPD2-201ENST00000342669 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
SNRPD2-201ENST00000342669 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
SNRPD2-201ENST00000342669 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
SNRPD2-201ENST00000342669 ANKRD31Q8N7Z5 1873 aa13.47□□□□□ -0.25
SNRPD2-201ENST00000342669 A1BGP04217 495 aa13.47□□□□□ -0.25
SNRPD2-201ENST00000342669 PPP2R1AP30153 589 aa13.47□□□□□ -0.25
SNRPD2-201ENST00000342669 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
SNRPD2-201ENST00000342669 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
SNRPD2-201ENST00000342669 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.25
SNRPD2-201ENST00000342669 KCNQ3O43525 872 aa13.46□□□□□ -0.25
SNRPD2-201ENST00000342669 LMNB1P20700 586 aa13.46□□□□□ -0.25
SNRPD2-201ENST00000342669 PDE6BP35913 854 aa13.46□□□□□ -0.25
SNRPD2-201ENST00000342669 RASSF7Q02833 373 aa13.46□□□□□ -0.25
SNRPD2-201ENST00000342669 SETDB2Q96T68 719 aa13.46□□□□□ -0.25
SNRPD2-201ENST00000342669 RRAGCQ9HB90 399 aa13.46□□□□□ -0.25
SNRPD2-201ENST00000342669 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
SNRPD2-201ENST00000342669 NPHP1O15259 732 aa13.45□□□□□ -0.26
SNRPD2-201ENST00000342669 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNRPD2-201ENST00000342669 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
SNRPD2-201ENST00000342669 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
SNRPD2-201ENST00000342669 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
SNRPD2-201ENST00000342669 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
SNRPD2-201ENST00000342669 FSTL1Q12841 308 aa13.44□□□□□ -0.26
SNRPD2-201ENST00000342669 MCM10Q7L590 875 aa13.44□□□□□ -0.26
SNRPD2-201ENST00000342669 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
SNRPD2-201ENST00000342669 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
SNRPD2-201ENST00000342669 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 ST5P78524 1137 aa13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
SNRPD2-201ENST00000342669 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
SNRPD2-201ENST00000342669 COL11A2P13942 1736 aaPredicted RBP13.42□□□□□ -0.26
SNRPD2-201ENST00000342669 NEFMP07197 916 aa13.42□□□□□ -0.26
SNRPD2-201ENST00000342669 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
SNRPD2-201ENST00000342669 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
SNRPD2-201ENST00000342669 GLTPD2A6NH11 291 aa13.41□□□□□ -0.26
SNRPD2-201ENST00000342669 C21orf2O43822 256 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms