RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 KCNQ3O43525 872 aa20.19■□□□□ 0.82
TNFRSF12A-202ENST00000341627 ADRA2BP18089 450 aa20.19■□□□□ 0.82
TNFRSF12A-202ENST00000341627 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
TNFRSF12A-202ENST00000341627 STARD3NLO95772 234 aa20.18■□□□□ 0.82
TNFRSF12A-202ENST00000341627 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
TNFRSF12A-202ENST00000341627 NLGN2Q8NFZ4 835 aa20.18■□□□□ 0.82
TNFRSF12A-202ENST00000341627 BABAM1Q9NWV8 329 aa20.18■□□□□ 0.82
TNFRSF12A-202ENST00000341627 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
TNFRSF12A-202ENST00000341627 COL5A3P25940 1745 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF12A-202ENST00000341627 TJP1Q07157 1748 aa20.18■□□□□ 0.82
TNFRSF12A-202ENST00000341627 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
TNFRSF12A-202ENST00000341627 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
TNFRSF12A-202ENST00000341627 GOLGB1Q14789 3259 aaKnown RBP20.16■□□□□ 0.82
TNFRSF12A-202ENST00000341627 SNRPA1P09661 255 aaKnown RBP20.16■□□□□ 0.82
TNFRSF12A-202ENST00000341627 CYP19A1P11511 503 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF12A-202ENST00000341627 CALD1Q05682 793 aaKnown RBP20.16■□□□□ 0.82
TNFRSF12A-202ENST00000341627 CCDC87Q9NVE4 849 aa20.16■□□□□ 0.82
TNFRSF12A-202ENST00000341627 RFC4P35249 363 aa20.14■□□□□ 0.81
TNFRSF12A-202ENST00000341627 NCBP3Q53F19 620 aaKnown RBP20.14■□□□□ 0.81
TNFRSF12A-202ENST00000341627 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
TNFRSF12A-202ENST00000341627 GYS1P13807 737 aa20.13■□□□□ 0.81
TNFRSF12A-202ENST00000341627 NLGN1Q8N2Q7 840 aa20.13■□□□□ 0.81
TNFRSF12A-202ENST00000341627 KDM3BQ7LBC6 1761 aa20.13■□□□□ 0.81
TNFRSF12A-202ENST00000341627 MMP10P09238 476 aa20.12■□□□□ 0.81
TNFRSF12A-202ENST00000341627 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
TNFRSF12A-202ENST00000341627 CCDC27Q2M243 656 aa20.12■□□□□ 0.81
TNFRSF12A-202ENST00000341627 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
TNFRSF12A-202ENST00000341627 MYH14Q7Z406 1995 aaKnown RBP20.12■□□□□ 0.81
TNFRSF12A-202ENST00000341627 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF12A-202ENST00000341627 CHL1O00533 1208 aa20.11■□□□□ 0.81
TNFRSF12A-202ENST00000341627 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
TNFRSF12A-202ENST00000341627 SRP68Q9UHB9 627 aaKnown RBP20.11■□□□□ 0.81
TNFRSF12A-202ENST00000341627 MIER1Q8N108 512 aa20.1■□□□□ 0.81
TNFRSF12A-202ENST00000341627 ZBTB1Q9Y2K1 713 aa20.1■□□□□ 0.81
TNFRSF12A-202ENST00000341627 USP42Q9H9J4 1324 aaKnown RBP20.09■□□□□ 0.81
TNFRSF12A-202ENST00000341627 CANXP27824 592 aaKnown RBP20.09■□□□□ 0.81
TNFRSF12A-202ENST00000341627 GNAI1P63096 354 aa20.09■□□□□ 0.81
TNFRSF12A-202ENST00000341627 NGEFQ8N5V2 710 aa20.09■□□□□ 0.81
TNFRSF12A-202ENST00000341627 IFT57Q9NWB7 429 aa20.09■□□□□ 0.81
TNFRSF12A-202ENST00000341627 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
TNFRSF12A-202ENST00000341627 SENP3-EIF4A1A0A087X0R7 540 aa20.08■□□□□ 0.81
TNFRSF12A-202ENST00000341627 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
TNFRSF12A-202ENST00000341627 GIGYF1O75420 1035 aaPredicted RBP20.08■□□□□ 0.81
TNFRSF12A-202ENST00000341627 FKBP8Q14318 412 aa20.08■□□□□ 0.81
TNFRSF12A-202ENST00000341627 GPR162Q16538 588 aa20.08■□□□□ 0.81
TNFRSF12A-202ENST00000341627 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.81
TNFRSF12A-202ENST00000341627 WWC1Q8IX03 1113 aa20.08■□□□□ 0.81
TNFRSF12A-202ENST00000341627 YY1P25490 414 aa20.07■□□□□ 0.8
TNFRSF12A-202ENST00000341627 A0A087WZG4 1122 aa20.06■□□□□ 0.8
TNFRSF12A-202ENST00000341627 A1BGP04217 495 aa20.06■□□□□ 0.8
TNFRSF12A-202ENST00000341627 YBX3P16989 372 aaKnown RBP eCLIP20.06■□□□□ 0.84e-6■□□□□ 11.2
TNFRSF12A-202ENST00000341627 IL6STP40189 918 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF12A-202ENST00000341627 SALL2Q9Y467 1007 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF12A-202ENST00000341627 COL15A1P39059 1388 aa20.06■□□□□ 0.8
TNFRSF12A-202ENST00000341627 ZNF853P0CG23 659 aa20.05■□□□□ 0.8
TNFRSF12A-202ENST00000341627 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
TNFRSF12A-202ENST00000341627 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
TNFRSF12A-202ENST00000341627 ZPR1O75312 459 aa20.04■□□□□ 0.8
TNFRSF12A-202ENST00000341627 USPL1Q5W0Q7 1092 aa20.04■□□□□ 0.8
TNFRSF12A-202ENST00000341627 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
TNFRSF12A-202ENST00000341627 NARFQ9UHQ1 456 aa20.04■□□□□ 0.8
TNFRSF12A-202ENST00000341627 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF12A-202ENST00000341627 TM4SF1P30408 202 aa20.03■□□□□ 0.8
TNFRSF12A-202ENST00000341627 DDR1Q08345 913 aa20.03■□□□□ 0.8
TNFRSF12A-202ENST00000341627 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
TNFRSF12A-202ENST00000341627 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
TNFRSF12A-202ENST00000341627 IL16Q14005 1332 aa20.02■□□□□ 0.8
TNFRSF12A-202ENST00000341627 WDR63Q8IWG1 891 aa20.02■□□□□ 0.8
TNFRSF12A-202ENST00000341627 PARP3Q9Y6F1 533 aa20.02■□□□□ 0.8
TNFRSF12A-202ENST00000341627 C4AP0C0L4 1744 aa20.01■□□□□ 0.79
TNFRSF12A-202ENST00000341627 ERBB4Q15303 1308 aa20.01■□□□□ 0.79
TNFRSF12A-202ENST00000341627 HOXB7P09629 217 aa20■□□□□ 0.79
TNFRSF12A-202ENST00000341627 NBPF26B4DH59 902 aa19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 POLRMTO00411 1230 aaKnown RBP19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 GRIN3BO60391 1043 aa19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 EIF2S2P20042 333 aaKnown RBP19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 PIP4K2AP48426 406 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 NBPF10Q6P3W6 841 aaKnown RBP19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 NBPF15Q8N660 670 aa19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 C10orf71Q711Q0 1435 aa19.99■□□□□ 0.79
TNFRSF12A-202ENST00000341627 TGFB2P61812 414 aa19.98■□□□□ 0.79
TNFRSF12A-202ENST00000341627 NFIXQ14938 502 aa19.98■□□□□ 0.79
TNFRSF12A-202ENST00000341627 KRT24Q2M2I5 525 aa19.98■□□□□ 0.79
TNFRSF12A-202ENST00000341627 DUSP27Q5VZP5 1158 aa19.97■□□□□ 0.79
TNFRSF12A-202ENST00000341627 DZIP3Q86Y13 1208 aaKnown RBP19.97■□□□□ 0.79
TNFRSF12A-202ENST00000341627 TBC1D2BQ9UPU7 963 aa19.97■□□□□ 0.79
TNFRSF12A-202ENST00000341627 PXDNLA1KZ92 1463 aa19.97■□□□□ 0.79
TNFRSF12A-202ENST00000341627 A0A0G2JLW4 131 aa19.96■□□□□ 0.79
TNFRSF12A-202ENST00000341627 TSR2Q969E8 191 aaKnown RBP19.96■□□□□ 0.79
TNFRSF12A-202ENST00000341627 CHMP4AQ9BY43 222 aa19.96■□□□□ 0.79
TNFRSF12A-202ENST00000341627 WWC3Q9ULE0 1092 aa19.96■□□□□ 0.79
TNFRSF12A-202ENST00000341627 MYL6BP14649 208 aa19.95■□□□□ 0.78
TNFRSF12A-202ENST00000341627 DPEP1P16444 411 aa19.95■□□□□ 0.78
TNFRSF12A-202ENST00000341627 HDGFL1Q5TGJ6 251 aa19.95■□□□□ 0.78
TNFRSF12A-202ENST00000341627 NECTIN2Q92692 538 aa19.94■□□□□ 0.78
TNFRSF12A-202ENST00000341627 MYH16Q9H6N6 1097 aa19.94■□□□□ 0.78
TNFRSF12A-202ENST00000341627 CAMTA2O94983 1202 aa19.93■□□□□ 0.78
TNFRSF12A-202ENST00000341627 KCNA3P22001 575 aa19.93■□□□□ 0.78
TNFRSF12A-202ENST00000341627 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
TNFRSF12A-202ENST00000341627 ZNF652Q9Y2D9 606 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms