RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 PDRG1Q9NUG6 133 aa20.4■□□□□ 0.86
SYDE2-202ENST00000341460 CTAGE5O15320 804 aa20.39■□□□□ 0.86
SYDE2-202ENST00000341460 ZSCAN25Q6NSZ9 544 aa20.39■□□□□ 0.86
SYDE2-202ENST00000341460 LRSAM1Q6UWE0 723 aa20.39■□□□□ 0.86
SYDE2-202ENST00000341460 TRIM22Q8IYM9 498 aa20.39■□□□□ 0.86
SYDE2-202ENST00000341460 SCLT1Q96NL6 688 aa20.39■□□□□ 0.86
SYDE2-202ENST00000341460 MYCBPQ99417 103 aaPredicted RBP20.39■□□□□ 0.85
SYDE2-202ENST00000341460 SIL1Q9H173 461 aa20.39■□□□□ 0.85
SYDE2-202ENST00000341460 KRBA2Q6ZNG9 492 aa20.39■□□□□ 0.85
SYDE2-202ENST00000341460 DDX54Q8TDD1 881 aaKnown RBP20.39■□□□□ 0.85
SYDE2-202ENST00000341460 NESP48681 1621 aa20.39■□□□□ 0.85
SYDE2-202ENST00000341460 ERBINQ96RT1 1412 aa20.39■□□□□ 0.85
SYDE2-202ENST00000341460 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC160A6NGH7 325 aa20.38■□□□□ 0.85
SYDE2-202ENST00000341460 LIG1P18858 919 aa20.38■□□□□ 0.85
SYDE2-202ENST00000341460 CFAP57Q96MR6 1250 aa20.38■□□□□ 0.85
SYDE2-202ENST00000341460 SRRTQ9BXP5 876 aaKnown RBP20.38■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC150Q8NCX0 1101 aa20.38■□□□□ 0.85
SYDE2-202ENST00000341460 TMX1Q9H3N1 280 aa20.38■□□□□ 0.85
SYDE2-202ENST00000341460 MPHOSPH10O00566 681 aaKnown RBP20.38■□□□□ 0.85
SYDE2-202ENST00000341460 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC57Q2TAC2 916 aa20.38■□□□□ 0.85
SYDE2-202ENST00000341460 GNG11P61952 73 aa20.37■□□□□ 0.85
SYDE2-202ENST00000341460 ATRIPQ8WXE1 791 aa20.37■□□□□ 0.85
SYDE2-202ENST00000341460 HLTFQ14527 1009 aaKnown RBP eCLIP20.37■□□□□ 0.85
SYDE2-202ENST00000341460 GOPCQ9HD26 462 aa20.37■□□□□ 0.85
SYDE2-202ENST00000341460 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
SYDE2-202ENST00000341460 BAG4O95429 457 aaKnown RBP20.37■□□□□ 0.85
SYDE2-202ENST00000341460 ZNF830Q96NB3 372 aaPredicted RBP20.37■□□□□ 0.85
SYDE2-202ENST00000341460 TMC6Q7Z403 805 aa20.37■□□□□ 0.85
SYDE2-202ENST00000341460 MPHOSPH8Q99549 860 aa20.37■□□□□ 0.85
SYDE2-202ENST00000341460 TMEM132AQ24JP5 1023 aa20.36■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC12Q8WUD4 166 aaPredicted RBP20.36■□□□□ 0.85
SYDE2-202ENST00000341460 TUBB4AP04350 444 aa20.36■□□□□ 0.85
SYDE2-202ENST00000341460 TROQ12816 1431 aaPredicted RBP20.36■□□□□ 0.85
SYDE2-202ENST00000341460 DDX19AQ9NUU7 478 aaKnown RBP20.36■□□□□ 0.85
SYDE2-202ENST00000341460 MYL6BP14649 208 aa20.36■□□□□ 0.85
SYDE2-202ENST00000341460 BLOC1S2Q6QNY1 142 aa20.36■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC69A6NI79 296 aa20.36■□□□□ 0.85
SYDE2-202ENST00000341460 USO1O60763 962 aaKnown RBP20.36■□□□□ 0.85
SYDE2-202ENST00000341460 CLNS1AP54105 237 aaKnown RBP20.36■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC114Q96M63 670 aa20.36■□□□□ 0.85
SYDE2-202ENST00000341460 ZSWIM4Q9H7M6 989 aa20.36■□□□□ 0.85
SYDE2-202ENST00000341460 NSRP1Q9H0G5 558 aaKnown RBP20.35■□□□□ 0.85
SYDE2-202ENST00000341460 PLEKHH1Q9ULM0 1364 aa20.35■□□□□ 0.85
SYDE2-202ENST00000341460 VPS18Q9P253 973 aa20.35■□□□□ 0.85
SYDE2-202ENST00000341460 CAVIN2O95810 425 aa20.35■□□□□ 0.85
SYDE2-202ENST00000341460 WWC2Q6AWC2 1192 aa20.35■□□□□ 0.85
SYDE2-202ENST00000341460 ANKLE2Q86XL3 938 aa20.35■□□□□ 0.85
SYDE2-202ENST00000341460 RRAGDQ9NQL2 400 aaPredicted RBP20.35■□□□□ 0.85
SYDE2-202ENST00000341460 MAP2K2P36507 400 aa20.35■□□□□ 0.85
SYDE2-202ENST00000341460 OPA1O60313 960 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 ARID4AP29374 1257 aaPredicted RBP20.34■□□□□ 0.85
SYDE2-202ENST00000341460 SEPT11Q9NVA2 429 aaKnown RBP20.34■□□□□ 0.85
SYDE2-202ENST00000341460 FCHSD2O94868 740 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 ZNF428Q96B54 188 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 CCDC178Q5BJE1 867 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 CKAP2LQ8IYA6 745 aa20.34■□□□□ 0.85
SYDE2-202ENST00000341460 ATP2B2Q01814 1243 aa20.33■□□□□ 0.85
SYDE2-202ENST00000341460 AACSQ86V21 672 aa20.33■□□□□ 0.85
SYDE2-202ENST00000341460 ZHX3Q9H4I2 956 aa20.33■□□□□ 0.85
SYDE2-202ENST00000341460 BTBD11A6QL63 1104 aa20.33■□□□□ 0.84
SYDE2-202ENST00000341460 SRGAP3O43295 1099 aa20.33■□□□□ 0.84
SYDE2-202ENST00000341460 TERF1P54274 439 aa20.33■□□□□ 0.84
SYDE2-202ENST00000341460 RBM27Q9P2N5 1060 aaKnown RBP20.33■□□□□ 0.84
SYDE2-202ENST00000341460 ANKS4BQ8N8V4 417 aa20.32■□□□□ 0.84
SYDE2-202ENST00000341460 JAKMIP1Q96N16 626 aaKnown RBP20.32■□□□□ 0.84
SYDE2-202ENST00000341460 GSTTP1A0A1W2PQM5 241 aa20.32■□□□□ 0.84
SYDE2-202ENST00000341460 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
SYDE2-202ENST00000341460 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 MAP4K4O95819 1239 aaPredicted RBP20.31■□□□□ 0.84
SYDE2-202ENST00000341460 FMNL3Q8IVF7 1028 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 ZFYP08048 801 aaPredicted RBP20.31■□□□□ 0.84
SYDE2-202ENST00000341460 ZNF165P49910 485 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 YEATS4O95619 227 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 PRDM11Q9NQV5 511 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.31■□□□□ 0.84
SYDE2-202ENST00000341460 CTNNA3Q9UI47 895 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 STX1AQ16623 288 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 CEP126Q9P2H0 1117 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 CTAGE15A4D2H0 777 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 CTAGE8P0CG41 777 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
SYDE2-202ENST00000341460 LRCH2Q5VUJ6 765 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 CTAGE6Q86UF2 777 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 CTAGE4Q8IX94 777 aa20.31■□□□□ 0.84
SYDE2-202ENST00000341460 RRS1Q15050 365 aaKnown RBP20.3■□□□□ 0.84
SYDE2-202ENST00000341460 MIPOL1Q8TD10 442 aa20.3■□□□□ 0.84
SYDE2-202ENST00000341460 CDKL5O76039 1030 aa20.3■□□□□ 0.84
SYDE2-202ENST00000341460 DDX46Q7L014 1031 aaKnown RBP20.3■□□□□ 0.84
SYDE2-202ENST00000341460 RPAP2Q8IXW5 612 aaPredicted RBP20.3■□□□□ 0.84
SYDE2-202ENST00000341460 DNAI1Q9UI46 699 aa20.3■□□□□ 0.84
SYDE2-202ENST00000341460 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
SYDE2-202ENST00000341460 SKILP12757 684 aa20.3■□□□□ 0.84
SYDE2-202ENST00000341460 RNF168Q8IYW5 571 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms