RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 G2E3Q7L622 706 aa26.4■■□□□ 1.82
CLDND1-201ENST00000341181 NOB1Q9ULX3 412 aaKnown RBP26.4■■□□□ 1.82
CLDND1-201ENST00000341181 KCNQ4P56696 695 aa26.39■■□□□ 1.82
CLDND1-201ENST00000341181 BRPF1P55201 1214 aaPredicted RBP26.38■■□□□ 1.81
CLDND1-201ENST00000341181 VSIG10Q8N0Z9 540 aa26.38■■□□□ 1.81
CLDND1-201ENST00000341181 STK31Q9BXU1 1019 aa26.38■■□□□ 1.81
CLDND1-201ENST00000341181 PDIA6Q15084 440 aa26.37■■□□□ 1.81
CLDND1-201ENST00000341181 KIF16BQ96L93 1317 aa26.37■■□□□ 1.81
CLDND1-201ENST00000341181 SMARCC1Q92922 1105 aaPredicted RBP26.37■■□□□ 1.81
CLDND1-201ENST00000341181 CANXP27824 592 aaKnown RBP26.36■■□□□ 1.81
CLDND1-201ENST00000341181 ITPK1Q13572 414 aa26.36■■□□□ 1.81
CLDND1-201ENST00000341181 PHAXQ9H814 394 aaKnown RBP26.36■■□□□ 1.81
CLDND1-201ENST00000341181 TRIM27P14373 513 aa26.35■■□□□ 1.81
CLDND1-201ENST00000341181 ATP6V1AP38606 617 aa26.35■■□□□ 1.81
CLDND1-201ENST00000341181 LY75O60449 1722 aa26.35■■□□□ 1.81
CLDND1-201ENST00000341181 CICQ96RK0 1608 aaPredicted RBP26.35■■□□□ 1.81
CLDND1-201ENST00000341181 A1BGP04217 495 aa26.34■■□□□ 1.81
CLDND1-201ENST00000341181 CLUAP1Q96AJ1 413 aa26.34■■□□□ 1.81
CLDND1-201ENST00000341181 DBF4Q9UBU7 674 aaPredicted RBP26.34■■□□□ 1.81
CLDND1-201ENST00000341181 NBPF26B4DH59 902 aa26.33■■□□□ 1.81
CLDND1-201ENST00000341181 MYL6BP14649 208 aa26.33■■□□□ 1.81
CLDND1-201ENST00000341181 NBPF14Q5TI25 921 aa26.33■■□□□ 1.81
CLDND1-201ENST00000341181 NBPF10Q6P3W6 841 aaKnown RBP26.33■■□□□ 1.81
CLDND1-201ENST00000341181 NBPF15Q8N660 670 aa26.33■■□□□ 1.81
CLDND1-201ENST00000341181 TNS1Q9HBL0 1735 aaKnown RBP26.33■■□□□ 1.81
CLDND1-201ENST00000341181 RLBP1P12271 317 aa26.33■■□□□ 1.81
CLDND1-201ENST00000341181 FLIIQ13045 1269 aa26.32■■□□□ 1.8
CLDND1-201ENST00000341181 ZKSCAN2Q63HK3 967 aa26.32■■□□□ 1.8
CLDND1-201ENST00000341181 LRP10Q7Z4F1 713 aa26.32■■□□□ 1.8
CLDND1-201ENST00000341181 CYP19A1P11511 503 aaPredicted RBP26.31■■□□□ 1.8
CLDND1-201ENST00000341181 ATF7IPQ6VMQ6 1270 aa26.31■■□□□ 1.8
CLDND1-201ENST00000341181 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.31■■□□□ 1.8
CLDND1-201ENST00000341181 PANK1Q8TE04 598 aa26.31■■□□□ 1.8
CLDND1-201ENST00000341181 DDX21Q9NR30 783 aaKnown RBP eCLIP26.31■■□□□ 1.8
CLDND1-201ENST00000341181 COL5A3P25940 1745 aaPredicted RBP26.31■■□□□ 1.8
CLDND1-201ENST00000341181 ZNF831Q5JPB2 1677 aa26.31■■□□□ 1.8
CLDND1-201ENST00000341181 CACNA1FO60840 1977 aa26.31■■□□□ 1.8
CLDND1-201ENST00000341181 STARD3NLO95772 234 aa26.29■■□□□ 1.8
CLDND1-201ENST00000341181 LINC00116Q8NCU8 138 aa26.29■■□□□ 1.8
CLDND1-201ENST00000341181 TEX13AQ9BXU3 409 aaPredicted RBP26.29■■□□□ 1.8
CLDND1-201ENST00000341181 CCNL1Q9UK58 526 aaPredicted RBP26.28■■□□□ 1.8
CLDND1-201ENST00000341181 ZBTB1Q9Y2K1 713 aa26.28■■□□□ 1.8
CLDND1-201ENST00000341181 CHMP4AQ9BY43 222 aa26.27■■□□□ 1.8
CLDND1-201ENST00000341181 MYH14Q7Z406 1995 aaKnown RBP26.27■■□□□ 1.8
CLDND1-201ENST00000341181 F6X3S4 739 aa26.27■■□□□ 1.8
CLDND1-201ENST00000341181 FKBP5Q13451 457 aaPredicted RBP26.27■■□□□ 1.8
CLDND1-201ENST00000341181 LRRC4BQ9NT99 713 aa26.27■■□□□ 1.8
CLDND1-201ENST00000341181 PTPRCP08575 1304 aa26.26■■□□□ 1.79
CLDND1-201ENST00000341181 IPO8O15397 1037 aaKnown RBP26.26■■□□□ 1.79
CLDND1-201ENST00000341181 CRKLP46109 303 aaKnown RBP26.26■■□□□ 1.79
CLDND1-201ENST00000341181 ARHGAP45Q92619 1136 aa26.26■■□□□ 1.79
CLDND1-201ENST00000341181 HYPKQ9NX55 129 aa26.26■■□□□ 1.79
CLDND1-201ENST00000341181 ERBB4Q15303 1308 aa26.25■■□□□ 1.79
CLDND1-201ENST00000341181 APBA3O96018 575 aa26.25■■□□□ 1.79
CLDND1-201ENST00000341181 AIMP1Q12904 312 aaKnown RBP26.25■■□□□ 1.79
CLDND1-201ENST00000341181 FTSJ3Q8IY81 847 aaKnown RBP26.24■■□□□ 1.79
CLDND1-201ENST00000341181 DZIP1LQ8IYY4 767 aaKnown RBP26.24■■□□□ 1.79
CLDND1-201ENST00000341181 XAGE3Q8WTP9 111 aa26.24■■□□□ 1.79
CLDND1-201ENST00000341181 TAF1LQ8IZX4 1826 aa26.24■■□□□ 1.79
CLDND1-201ENST00000341181 INTS5Q6P9B9 1019 aaKnown RBP26.24■■□□□ 1.79
CLDND1-201ENST00000341181 RREB1Q92766 1687 aa26.24■■□□□ 1.79
CLDND1-201ENST00000341181 PDE3AQ14432 1141 aa26.23■■□□□ 1.79
CLDND1-201ENST00000341181 CRBNQ96SW2 442 aa26.23■■□□□ 1.79
CLDND1-201ENST00000341181 ZNF330Q9Y3S2 320 aaPredicted RBP26.23■■□□□ 1.79
CLDND1-201ENST00000341181 ABCC4O15439 1325 aa26.23■■□□□ 1.79
CLDND1-201ENST00000341181 ADCY9O60503 1353 aa26.23■■□□□ 1.79
CLDND1-201ENST00000341181 COPS6Q7L5N1 327 aa26.23■■□□□ 1.79
CLDND1-201ENST00000341181 PROM2Q8N271 834 aa26.23■■□□□ 1.79
CLDND1-201ENST00000341181 COG6Q9Y2V7 657 aa26.23■■□□□ 1.79
CLDND1-201ENST00000341181 TMEM57Q8N5G2 664 aa26.22■■□□□ 1.79
CLDND1-201ENST00000341181 API5Q9BZZ5 524 aaKnown RBP26.22■■□□□ 1.79
CLDND1-201ENST00000341181 CCDC87Q9NVE4 849 aa26.22■■□□□ 1.79
CLDND1-201ENST00000341181 EXOC6Q8TAG9 804 aa26.21■■□□□ 1.79
CLDND1-201ENST00000341181 PI4KAP2A4QPH2 592 aa26.2■■□□□ 1.79
CLDND1-201ENST00000341181 PI4KAP1Q8N8J0 262 aa26.2■■□□□ 1.79
CLDND1-201ENST00000341181 TTLL7Q6ZT98 887 aa26.2■■□□□ 1.78
CLDND1-201ENST00000341181 TXNRD1Q16881 649 aa26.19■■□□□ 1.78
CLDND1-201ENST00000341181 C4BP0C0L5 1744 aa26.19■■□□□ 1.78
CLDND1-201ENST00000341181 PLSCR1O15162 318 aa26.18■■□□□ 1.78
CLDND1-201ENST00000341181 SLC4A10Q6U841 1118 aa26.18■■□□□ 1.78
CLDND1-201ENST00000341181 SMIM5Q71RC9 77 aa26.18■■□□□ 1.78
CLDND1-201ENST00000341181 AMIGO3Q86WK7 504 aa26.17■■□□□ 1.78
CLDND1-201ENST00000341181 CNTNAP4Q9C0A0 1308 aa26.17■■□□□ 1.78
CLDND1-201ENST00000341181 B4GALNT3Q6L9W6 998 aa26.16■■□□□ 1.78
CLDND1-201ENST00000341181 ITPRIPQ8IWB1 547 aa26.16■■□□□ 1.78
CLDND1-201ENST00000341181 MAP3K2Q9Y2U5 619 aa26.16■■□□□ 1.78
CLDND1-201ENST00000341181 MVPQ14764 893 aaKnown RBP26.15■■□□□ 1.78
CLDND1-201ENST00000341181 SLC27A3Q5K4L6 730 aa26.15■■□□□ 1.78
CLDND1-201ENST00000341181 RGPD3A6NKT7 1758 aaPredicted RBP26.15■■□□□ 1.78
CLDND1-201ENST00000341181 RGPD4Q7Z3J3 1758 aa26.15■■□□□ 1.78
CLDND1-201ENST00000341181 ARFGEF2Q9Y6D5 1785 aa26.15■■□□□ 1.78
CLDND1-201ENST00000341181 IL6STP40189 918 aaPredicted RBP26.14■■□□□ 1.78
CLDND1-201ENST00000341181 EIF5P55010 431 aaKnown RBP26.14■■□□□ 1.78
CLDND1-201ENST00000341181 NUP188Q5SRE5 1749 aa26.14■■□□□ 1.78
CLDND1-201ENST00000341181 KSR2Q6VAB6 950 aa26.14■■□□□ 1.77
CLDND1-201ENST00000341181 DNAAF4Q8WXU2 420 aa26.14■■□□□ 1.77
CLDND1-201ENST00000341181 EN1Q05925 392 aaPredicted RBP26.13■■□□□ 1.77
CLDND1-201ENST00000341181 ANKRD13DQ6ZTN6 518 aa26.13■■□□□ 1.77
CLDND1-201ENST00000341181 ZBTB3Q9H5J0 574 aa26.13■■□□□ 1.77
CLDND1-201ENST00000341181 PPP4R2Q9NY27 417 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms