RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 DDR1Q08345 913 aa22.81■■□□□ 1.24
BRCC3-202ENST00000340647 PLEKHF1Q96S99 279 aa22.81■■□□□ 1.24
BRCC3-202ENST00000340647 TEFQ10587 303 aa22.8■■□□□ 1.24
BRCC3-202ENST00000340647 DDX10Q13206 875 aaKnown RBP22.8■■□□□ 1.24
BRCC3-202ENST00000340647 DCTN1Q14203 1278 aa22.8■■□□□ 1.24
BRCC3-202ENST00000340647 MCM10Q7L590 875 aa22.8■■□□□ 1.24
BRCC3-202ENST00000340647 BCL2L12Q9HB09 334 aa22.8■■□□□ 1.24
BRCC3-202ENST00000340647 NRXN2Q9P2S2 1712 aa22.79■■□□□ 1.24
BRCC3-202ENST00000340647 GRIN3BO60391 1043 aa22.78■■□□□ 1.24
BRCC3-202ENST00000340647 TM4SF1P30408 202 aa22.78■■□□□ 1.24
BRCC3-202ENST00000340647 WWC3Q9ULE0 1092 aa22.78■■□□□ 1.24
BRCC3-202ENST00000340647 COL15A1P39059 1388 aa22.77■■□□□ 1.24
BRCC3-202ENST00000340647 EIF5P55010 431 aaKnown RBP22.76■■□□□ 1.23
BRCC3-202ENST00000340647 USPL1Q5W0Q7 1092 aa22.76■■□□□ 1.23
BRCC3-202ENST00000340647 PRAMEF22A3QJZ6 481 aa22.75■■□□□ 1.23
BRCC3-202ENST00000340647 KCNA3P22001 575 aa22.75■■□□□ 1.23
BRCC3-202ENST00000340647 TTC5Q8N0Z6 440 aa22.75■■□□□ 1.23
BRCC3-202ENST00000340647 NARFQ9UHQ1 456 aa22.75■■□□□ 1.23
BRCC3-202ENST00000340647 KDM3BQ7LBC6 1761 aa22.75■■□□□ 1.23
BRCC3-202ENST00000340647 BTBD11A6QL63 1104 aa22.74■■□□□ 1.23
BRCC3-202ENST00000340647 POLRMTO00411 1230 aaKnown RBP22.74■■□□□ 1.23
BRCC3-202ENST00000340647 CANXP27824 592 aaKnown RBP22.74■■□□□ 1.23
BRCC3-202ENST00000340647 SCN7AQ01118 1682 aa22.74■■□□□ 1.23
BRCC3-202ENST00000340647 A0A0G2JLW4 131 aa22.73■■□□□ 1.23
BRCC3-202ENST00000340647 HTATSF1O43719 755 aaKnown RBP22.73■■□□□ 1.23
BRCC3-202ENST00000340647 PARP3Q9Y6F1 533 aa22.73■■□□□ 1.23
BRCC3-202ENST00000340647 ATP10DQ9P241 1426 aa22.73■■□□□ 1.23
BRCC3-202ENST00000340647 A1BGP04217 495 aa22.72■■□□□ 1.23
BRCC3-202ENST00000340647 TGFB2P61812 414 aa22.72■■□□□ 1.23
BRCC3-202ENST00000340647 RALBP1Q15311 655 aa22.72■■□□□ 1.23
BRCC3-202ENST00000340647 FMNL2Q96PY5 1086 aa22.72■■□□□ 1.23
BRCC3-202ENST00000340647 USP16Q9Y5T5 823 aa22.72■■□□□ 1.23
BRCC3-202ENST00000340647 ARFGEF1Q9Y6D6 1849 aa22.72■■□□□ 1.23
BRCC3-202ENST00000340647 DPEP1P16444 411 aa22.71■■□□□ 1.23
BRCC3-202ENST00000340647 NFIXQ14938 502 aa22.71■■□□□ 1.23
BRCC3-202ENST00000340647 BCORQ6W2J9 1755 aa22.71■■□□□ 1.23
BRCC3-202ENST00000340647 STARD3NLO95772 234 aa22.7■■□□□ 1.22
BRCC3-202ENST00000340647 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
BRCC3-202ENST00000340647 ADCY9O60503 1353 aa22.69■■□□□ 1.22
BRCC3-202ENST00000340647 ZPR1O75312 459 aa22.69■■□□□ 1.22
BRCC3-202ENST00000340647 MIS18AQ9NYP9 233 aa22.69■■□□□ 1.22
BRCC3-202ENST00000340647 RTF1Q92541 710 aaKnown RBP22.68■■□□□ 1.22
BRCC3-202ENST00000340647 THUMPD2Q9BTF0 503 aaKnown RBP22.68■■□□□ 1.22
BRCC3-202ENST00000340647 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
BRCC3-202ENST00000340647 PIP4K2AP48426 406 aaPredicted RBP22.67■■□□□ 1.22
BRCC3-202ENST00000340647 NFE2L2Q16236 605 aa22.67■■□□□ 1.22
BRCC3-202ENST00000340647 LAMB4A4D0S4 1761 aa22.67■■□□□ 1.22
BRCC3-202ENST00000340647 DLEC1Q9Y238 1755 aa22.67■■□□□ 1.22
BRCC3-202ENST00000340647 IL6STP40189 918 aaPredicted RBP22.66■■□□□ 1.22
BRCC3-202ENST00000340647 TAF7Q15545 349 aaPredicted RBP22.66■■□□□ 1.22
BRCC3-202ENST00000340647 TBC1D2BQ9UPU7 963 aa22.65■■□□□ 1.22
BRCC3-202ENST00000340647 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
BRCC3-202ENST00000340647 MYBBP1AQ9BQG0 1328 aaKnown RBP22.64■■□□□ 1.22
BRCC3-202ENST00000340647 NBPF26B4DH59 902 aa22.64■■□□□ 1.21
BRCC3-202ENST00000340647 CHRNA5P30532 468 aa22.64■■□□□ 1.21
BRCC3-202ENST00000340647 NBPF10Q6P3W6 841 aaKnown RBP22.64■■□□□ 1.21
BRCC3-202ENST00000340647 NBPF15Q8N660 670 aa22.64■■□□□ 1.21
BRCC3-202ENST00000340647 CAMTA2O94983 1202 aa22.63■■□□□ 1.21
BRCC3-202ENST00000340647 TBC1D9BQ66K14 1250 aa22.63■■□□□ 1.21
BRCC3-202ENST00000340647 SBF1O95248 1867 aa22.62■■□□□ 1.21
BRCC3-202ENST00000340647 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
BRCC3-202ENST00000340647 GPBP1L1Q9HC44 474 aaPredicted RBP22.62■■□□□ 1.21
BRCC3-202ENST00000340647 BCS1LQ9Y276 419 aa22.62■■□□□ 1.21
BRCC3-202ENST00000340647 SERPINB2P05120 415 aa22.61■■□□□ 1.21
BRCC3-202ENST00000340647 COL11A2P13942 1736 aaPredicted RBP22.6■■□□□ 1.21
BRCC3-202ENST00000340647 A0A087WZG4 1122 aa22.6■■□□□ 1.21
BRCC3-202ENST00000340647 ZNF526Q8TF50 670 aaPredicted RBP22.6■■□□□ 1.21
BRCC3-202ENST00000340647 PRKRIP1Q9H875 184 aaPredicted RBP22.6■■□□□ 1.21
BRCC3-202ENST00000340647 IFFO2Q5TF58 517 aa22.59■■□□□ 1.21
BRCC3-202ENST00000340647 ZNF330Q9Y3S2 320 aaPredicted RBP22.59■■□□□ 1.21
BRCC3-202ENST00000340647 EIF4A1P60842 406 aaKnown RBP22.58■■□□□ 1.21
BRCC3-202ENST00000340647 BICDL1Q6ZP65 573 aa22.58■■□□□ 1.21
BRCC3-202ENST00000340647 TMPOP42166 694 aaKnown RBP22.57■■□□□ 1.2
BRCC3-202ENST00000340647 PIM2Q9P1W9 311 aa22.57■■□□□ 1.2
BRCC3-202ENST00000340647 NUP98P52948 1817 aa22.56■■□□□ 1.2
BRCC3-202ENST00000340647 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
BRCC3-202ENST00000340647 RIPK4P57078 832 aa22.55■■□□□ 1.2
BRCC3-202ENST00000340647 DZIP3Q86Y13 1208 aaKnown RBP22.55■■□□□ 1.2
BRCC3-202ENST00000340647 CCDC146Q8IYE0 955 aa22.55■■□□□ 1.2
BRCC3-202ENST00000340647 CCDC24Q8N4L8 307 aa22.55■■□□□ 1.2
BRCC3-202ENST00000340647 PNNQ9H307 717 aaKnown RBP22.55■■□□□ 1.2
BRCC3-202ENST00000340647 CCDC88AQ3V6T2 1871 aa22.54■■□□□ 1.2
BRCC3-202ENST00000340647 NEFMP07197 916 aa22.54■■□□□ 1.2
BRCC3-202ENST00000340647 HSPA6P17066 643 aa22.54■■□□□ 1.2
BRCC3-202ENST00000340647 PRR5LQ6MZQ0 368 aa22.54■■□□□ 1.2
BRCC3-202ENST00000340647 ADAMTS8Q9UP79 889 aa22.54■■□□□ 1.2
BRCC3-202ENST00000340647 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
BRCC3-202ENST00000340647 CACNA1SQ13698 1873 aa22.52■■□□□ 1.2
BRCC3-202ENST00000340647 KIF3CO14782 793 aa22.52■■□□□ 1.2
BRCC3-202ENST00000340647 DALRD3Q5D0E6 543 aaKnown RBP22.52■■□□□ 1.2
BRCC3-202ENST00000340647 ARHGAP27Q6ZUM4 889 aa22.52■■□□□ 1.2
BRCC3-202ENST00000340647 PNISRQ8TF01 805 aaKnown RBP22.52■■□□□ 1.2
BRCC3-202ENST00000340647 TRIM35Q9UPQ4 493 aa22.52■■□□□ 1.2
BRCC3-202ENST00000340647 HLFQ16534 295 aa22.51■■□□□ 1.19
BRCC3-202ENST00000340647 PRELPP51888 382 aa22.5■■□□□ 1.19
BRCC3-202ENST00000340647 SLX4Q8IY92 1834 aa22.5■■□□□ 1.19
BRCC3-202ENST00000340647 LRP10Q7Z4F1 713 aa22.49■■□□□ 1.19
BRCC3-202ENST00000340647 C2CD5Q86YS7 1000 aa22.49■■□□□ 1.19
BRCC3-202ENST00000340647 ARFGEF2Q9Y6D5 1785 aa22.48■■□□□ 1.19
BRCC3-202ENST00000340647 CCDC184Q52MB2 194 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms