RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 WDR17Q8IZU2 1322 aa19.16■□□□□ 0.66
MBD1-203ENST00000339998 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
MBD1-203ENST00000339998 CABP4P57796 275 aa19.16■□□□□ 0.66
MBD1-203ENST00000339998 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
MBD1-203ENST00000339998 EVA1CP58658 441 aa19.15■□□□□ 0.66
MBD1-203ENST00000339998 DCAF5Q96JK2 942 aa19.15■□□□□ 0.66
MBD1-203ENST00000339998 SIPA1L3O60292 1781 aaPredicted RBP19.15■□□□□ 0.66
MBD1-203ENST00000339998 KAT6BQ8WYB5 2073 aa19.14■□□□□ 0.66
MBD1-203ENST00000339998 SURF6O75683 361 aaKnown RBP19.14■□□□□ 0.65
MBD1-203ENST00000339998 KSR2Q6VAB6 950 aa19.14■□□□□ 0.65
MBD1-203ENST00000339998 COPS6Q7L5N1 327 aa19.14■□□□□ 0.65
MBD1-203ENST00000339998 NUTM1Q86Y26 1132 aa19.14■□□□□ 0.65
MBD1-203ENST00000339998 TTC5Q8N0Z6 440 aa19.14■□□□□ 0.65
MBD1-203ENST00000339998 ZCRB1Q8TBF4 217 aaKnown RBP19.14■□□□□ 0.65
MBD1-203ENST00000339998 XAGE3Q8WTP9 111 aa19.14■□□□□ 0.65
MBD1-203ENST00000339998 LRRCC1Q9C099 1032 aa19.14■□□□□ 0.65
MBD1-203ENST00000339998 SCN11AQ9UI33 1791 aa19.13■□□□□ 0.65
MBD1-203ENST00000339998 PDE1AP54750 535 aa19.13■□□□□ 0.65
MBD1-203ENST00000339998 C9orf78Q9NZ63 289 aaPredicted RBP19.13■□□□□ 0.65
MBD1-203ENST00000339998 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
MBD1-203ENST00000339998 DDX21Q9NR30 783 aaKnown RBP eCLIP19.13■□□□□ 0.65
MBD1-203ENST00000339998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.651e-7■□□□□ 11
MBD1-203ENST00000339998 COL5A2P05997 1499 aaPredicted RBP19.12■□□□□ 0.65
MBD1-203ENST00000339998 CDC45O75419 566 aa19.12■□□□□ 0.65
MBD1-203ENST00000339998 PA2G4Q9UQ80 394 aaKnown RBP19.12■□□□□ 0.65
MBD1-203ENST00000339998 BTG4Q9NY30 223 aa19.11■□□□□ 0.65
MBD1-203ENST00000339998 C5P01031 1676 aa19.11■□□□□ 0.65
MBD1-203ENST00000339998 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
MBD1-203ENST00000339998 RIC3Q7Z5B4 369 aa19.11■□□□□ 0.65
MBD1-203ENST00000339998 BECN1Q14457 450 aa19.11■□□□□ 0.65
MBD1-203ENST00000339998 NFKBIBQ15653 356 aa19.11■□□□□ 0.65
MBD1-203ENST00000339998 SSH3Q8TE77 659 aa19.11■□□□□ 0.65
MBD1-203ENST00000339998 KIF2CQ99661 725 aa19.11■□□□□ 0.65
MBD1-203ENST00000339998 OVOS2A0A0G2JMS6 1433 aa19.1■□□□□ 0.65
MBD1-203ENST00000339998 IBTKQ9P2D0 1353 aaPredicted RBP19.1■□□□□ 0.65
MBD1-203ENST00000339998 CD2BP2O95400 341 aaKnown RBP19.1■□□□□ 0.65
MBD1-203ENST00000339998 HYPKQ9NX55 129 aa19.1■□□□□ 0.65
MBD1-203ENST00000339998 IGKV5-2P06315 115 aa19.1■□□□□ 0.65
MBD1-203ENST00000339998 RTL5Q5HYW3 569 aaPredicted RBP19.09■□□□□ 0.65
MBD1-203ENST00000339998 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
MBD1-203ENST00000339998 ADAMTS7Q9UKP4 1686 aa19.09■□□□□ 0.65
MBD1-203ENST00000339998 PXDNLA1KZ92 1463 aa19.09■□□□□ 0.65
MBD1-203ENST00000339998 IL2RBP14784 551 aa19.09■□□□□ 0.65
MBD1-203ENST00000339998 FRAT2O75474 233 aaPredicted RBP19.08■□□□□ 0.65
MBD1-203ENST00000339998 ATP5J2-PTCD1G3V325 749 aa19.08■□□□□ 0.64
MBD1-203ENST00000339998 KAZALD1Q96I82 304 aa19.08■□□□□ 0.64
MBD1-203ENST00000339998 MYD88Q99836 296 aa19.08■□□□□ 0.64
MBD1-203ENST00000339998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.08■□□□□ 0.64
MBD1-203ENST00000339998 SNRPA1P09661 255 aaKnown RBP19.08■□□□□ 0.64
MBD1-203ENST00000339998 MX1P20591 662 aa19.08■□□□□ 0.64
MBD1-203ENST00000339998 KLHDC4Q8TBB5 520 aa19.08■□□□□ 0.64
MBD1-203ENST00000339998 SUCLG2Q96I99 432 aa19.08■□□□□ 0.64
MBD1-203ENST00000339998 RBM25P49756 843 aaKnown RBP19.07■□□□□ 0.64
MBD1-203ENST00000339998 RILPL2Q969X0 211 aa19.07■□□□□ 0.64
MBD1-203ENST00000339998 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
MBD1-203ENST00000339998 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
MBD1-203ENST00000339998 SALL3Q9BXA9 1300 aa19.07■□□□□ 0.64
MBD1-203ENST00000339998 TRIM6-TRIM34B2RNG4 842 aa19.06■□□□□ 0.64
MBD1-203ENST00000339998 POLA2Q14181 598 aa19.06■□□□□ 0.64
MBD1-203ENST00000339998 LRP10Q7Z4F1 713 aa19.06■□□□□ 0.64
MBD1-203ENST00000339998 A1BGP04217 495 aa19.06■□□□□ 0.64
MBD1-203ENST00000339998 RHPN1Q8TCX5 695 aa19.06■□□□□ 0.64
MBD1-203ENST00000339998 CARD10Q9BWT7 1032 aa19.06■□□□□ 0.64
MBD1-203ENST00000339998 BICC1Q9H694 974 aaKnown RBP19.05■□□□□ 0.64
MBD1-203ENST00000339998 PCDH11XQ9BZA7 1347 aa19.05■□□□□ 0.64
MBD1-203ENST00000339998 PCDH11YQ9BZA8 1340 aa19.05■□□□□ 0.64
MBD1-203ENST00000339998 NBPF26B4DH59 902 aa19.05■□□□□ 0.64
MBD1-203ENST00000339998 GRM8O00222 908 aa19.05■□□□□ 0.64
MBD1-203ENST00000339998 NBPF14Q5TI25 921 aa19.05■□□□□ 0.64
MBD1-203ENST00000339998 NBPF10Q6P3W6 841 aaKnown RBP19.05■□□□□ 0.64
MBD1-203ENST00000339998 NBPF15Q8N660 670 aa19.05■□□□□ 0.64
MBD1-203ENST00000339998 OS9Q13438 667 aaPredicted RBP19.04■□□□□ 0.64
MBD1-203ENST00000339998 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
MBD1-203ENST00000339998 LINS1Q8NG48 757 aa19.04■□□□□ 0.64
MBD1-203ENST00000339998 SIL1Q9H173 461 aa19.04■□□□□ 0.64
MBD1-203ENST00000339998 ZNF330Q9Y3S2 320 aaPredicted RBP19.04■□□□□ 0.64
MBD1-203ENST00000339998 HSP90AB1P08238 724 aaKnown RBP19.04■□□□□ 0.64
MBD1-203ENST00000339998 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
MBD1-203ENST00000339998 PKD1L3Q7Z443 1732 aa19.03■□□□□ 0.64
MBD1-203ENST00000339998 ADAMTS2O95450 1211 aa19.03■□□□□ 0.64
MBD1-203ENST00000339998 DDX58O95786 925 aaKnown RBP19.03■□□□□ 0.64
MBD1-203ENST00000339998 CHMP4AQ9BY43 222 aa19.03■□□□□ 0.64
MBD1-203ENST00000339998 ANTXR1Q9H6X2 564 aa19.03■□□□□ 0.64
MBD1-203ENST00000339998 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
MBD1-203ENST00000339998 N4BP2Q86UW6 1770 aaPredicted RBP19.03■□□□□ 0.64
MBD1-203ENST00000339998 TTLL7Q6ZT98 887 aa19.02■□□□□ 0.64
MBD1-203ENST00000339998 NEURL1BA8MQ27 555 aa19.02■□□□□ 0.64
MBD1-203ENST00000339998 IL25Q9H293 177 aa19.02■□□□□ 0.64
MBD1-203ENST00000339998 ALDH1L1O75891 902 aa19.02■□□□□ 0.63
MBD1-203ENST00000339998 OSBPL3Q9H4L5 887 aa19.02■□□□□ 0.63
MBD1-203ENST00000339998 USP26Q9BXU7 913 aa19.01■□□□□ 0.63
MBD1-203ENST00000339998 ASAP1Q9ULH1 1129 aa19.01■□□□□ 0.63
MBD1-203ENST00000339998 HSCBQ8IWL3 235 aa19■□□□□ 0.63
MBD1-203ENST00000339998 DEKP35659 375 aaKnown RBP18.99■□□□□ 0.63
MBD1-203ENST00000339998 PIP4K2BP78356 416 aa18.99■□□□□ 0.63
MBD1-203ENST00000339998 GCKRQ14397 625 aa18.99■□□□□ 0.63
MBD1-203ENST00000339998 METTL22Q9BUU2 404 aaPredicted RBP18.99■□□□□ 0.63
MBD1-203ENST00000339998 UBE3BQ7Z3V4 1068 aa18.99■□□□□ 0.63
MBD1-203ENST00000339998 ZBTB3Q9H5J0 574 aa18.99■□□□□ 0.63
MBD1-203ENST00000339998 MRC1P22897 1456 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 1275.5 ms