RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TRIM6-TRIM34B2RNG4 842 aa28.49■■■□□ 2.15
CLPTM1-201ENST00000337392 HSP90AB1P08238 724 aaKnown RBP28.49■■■□□ 2.15
CLPTM1-201ENST00000337392 USP26Q9BXU7 913 aa28.49■■■□□ 2.15
CLPTM1-201ENST00000337392 SPATA31A3Q5VYP0 1347 aa28.49■■■□□ 2.15
CLPTM1-201ENST00000337392 ZNF496Q96IT1 587 aaPredicted RBP28.49■■■□□ 2.15
CLPTM1-201ENST00000337392 SALL3Q9BXA9 1300 aa28.49■■■□□ 2.15
CLPTM1-201ENST00000337392 GSE1Q14687 1217 aa28.48■■■□□ 2.15
CLPTM1-201ENST00000337392 PA2G4Q9UQ80 394 aaKnown RBP28.48■■■□□ 2.15
CLPTM1-201ENST00000337392 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
CLPTM1-201ENST00000337392 SLC52A2Q9HAB3 445 aa28.48■■■□□ 2.15
CLPTM1-201ENST00000337392 PDIA6Q15084 440 aa28.47■■■□□ 2.15
CLPTM1-201ENST00000337392 SSH3Q8TE77 659 aa28.47■■■□□ 2.15
CLPTM1-201ENST00000337392 IL25Q9H293 177 aa28.46■■■□□ 2.15
CLPTM1-201ENST00000337392 USP16Q9Y5T5 823 aa28.46■■■□□ 2.15
CLPTM1-201ENST00000337392 KDM4FA0A1W2PPD8 638 aa28.46■■■□□ 2.15
CLPTM1-201ENST00000337392 HOXB7P09629 217 aa28.46■■■□□ 2.15
CLPTM1-201ENST00000337392 C9orf78Q9NZ63 289 aaPredicted RBP28.45■■■□□ 2.14
CLPTM1-201ENST00000337392 HEG1Q9ULI3 1381 aa28.44■■■□□ 2.14
CLPTM1-201ENST00000337392 ARXQ96QS3 562 aa28.43■■■□□ 2.14
CLPTM1-201ENST00000337392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.43■■■□□ 2.14
CLPTM1-201ENST00000337392 PXDNLA1KZ92 1463 aa28.43■■■□□ 2.14
CLPTM1-201ENST00000337392 CAMTA1Q9Y6Y1 1673 aa28.42■■■□□ 2.14
CLPTM1-201ENST00000337392 HSP90AA1P07900 732 aaKnown RBP28.42■■■□□ 2.14
CLPTM1-201ENST00000337392 PRDM11Q9NQV5 511 aa28.42■■■□□ 2.14
CLPTM1-201ENST00000337392 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.42■■■□□ 2.14
CLPTM1-201ENST00000337392 XIRP1Q702N8 1843 aaKnown RBP28.42■■■□□ 2.14
CLPTM1-201ENST00000337392 RHPN1Q8TCX5 695 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 SNX21Q969T3 373 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 OSBPL3Q9H4L5 887 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 COL18A1P39060 1754 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 KSR2Q6VAB6 950 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 IFNL2Q8IZJ0 200 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 IL27Q8NEV9 243 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 SPG7Q9UQ90 795 aa28.41■■■□□ 2.14
CLPTM1-201ENST00000337392 POLA2Q14181 598 aa28.4■■■□□ 2.14
CLPTM1-201ENST00000337392 STRN4Q9NRL3 753 aa28.4■■■□□ 2.14
CLPTM1-201ENST00000337392 KLHDC4Q8TBB5 520 aa28.4■■■□□ 2.14
CLPTM1-201ENST00000337392 CHMP5Q9NZZ3 219 aa28.4■■■□□ 2.14
CLPTM1-201ENST00000337392 SLAIN2Q9P270 581 aa28.39■■■□□ 2.14
CLPTM1-201ENST00000337392 XAGE3Q8WTP9 111 aa28.39■■■□□ 2.14
CLPTM1-201ENST00000337392 GZF1Q9H116 711 aaPredicted RBP28.39■■■□□ 2.14
CLPTM1-201ENST00000337392 TOM1L2Q6ZVM7 507 aa28.39■■■□□ 2.13
CLPTM1-201ENST00000337392 COPS6Q7L5N1 327 aa28.39■■■□□ 2.13
CLPTM1-201ENST00000337392 K7ELQ4 463 aaPredicted RBP28.38■■■□□ 2.13
CLPTM1-201ENST00000337392 OS9Q13438 667 aaPredicted RBP28.38■■■□□ 2.13
CLPTM1-201ENST00000337392 KAZALD1Q96I82 304 aa28.38■■■□□ 2.13
CLPTM1-201ENST00000337392 SUCLG2Q96I99 432 aa28.38■■■□□ 2.13
CLPTM1-201ENST00000337392 DCCP43146 1447 aa28.38■■■□□ 2.13
CLPTM1-201ENST00000337392 SIPA1L3O60292 1781 aaPredicted RBP28.38■■■□□ 2.13
CLPTM1-201ENST00000337392 IGKV5-2P06315 115 aa28.38■■■□□ 2.13
CLPTM1-201ENST00000337392 CASC1Q6TDU7 716 aa28.37■■■□□ 2.13
CLPTM1-201ENST00000337392 DDX21Q9NR30 783 aaKnown RBP eCLIP28.37■■■□□ 2.13
CLPTM1-201ENST00000337392 RIC3Q7Z5B4 369 aa28.37■■■□□ 2.13
CLPTM1-201ENST00000337392 AK9Q5TCS8 1911 aa28.36■■■□□ 2.13
CLPTM1-201ENST00000337392 C5P01031 1676 aa28.36■■■□□ 2.13
CLPTM1-201ENST00000337392 ERC2O15083 957 aa28.36■■■□□ 2.13
CLPTM1-201ENST00000337392 SIL1Q9H173 461 aa28.36■■■□□ 2.13
CLPTM1-201ENST00000337392 PALD1Q9ULE6 856 aa28.36■■■□□ 2.13
CLPTM1-201ENST00000337392 DDIT3P35638 169 aa28.36■■■□□ 2.13
CLPTM1-201ENST00000337392 DDX54Q8TDD1 881 aaKnown RBP28.35■■■□□ 2.13
CLPTM1-201ENST00000337392 BICC1Q9H694 974 aaKnown RBP28.35■■■□□ 2.13
CLPTM1-201ENST00000337392 N4BP2Q86UW6 1770 aaPredicted RBP28.35■■■□□ 2.13
CLPTM1-201ENST00000337392 CRYBG1Q9Y4K1 1723 aa28.34■■■□□ 2.13
CLPTM1-201ENST00000337392 NOL8Q76FK4 1167 aaKnown RBP28.34■■■□□ 2.13
CLPTM1-201ENST00000337392 ANO2Q9NQ90 1003 aa28.34■■■□□ 2.13
CLPTM1-201ENST00000337392 HYPKQ9NX55 129 aa28.34■■■□□ 2.13
CLPTM1-201ENST00000337392 NCOA3Q9Y6Q9 1424 aa28.34■■■□□ 2.13
CLPTM1-201ENST00000337392 CHMLP26374 656 aa28.34■■■□□ 2.13
CLPTM1-201ENST00000337392 MYD88Q99836 296 aa28.34■■■□□ 2.13
CLPTM1-201ENST00000337392 MCM4P33991 863 aa28.33■■■□□ 2.13
CLPTM1-201ENST00000337392 CABP4P57796 275 aa28.33■■■□□ 2.13
CLPTM1-201ENST00000337392 TTC5Q8N0Z6 440 aa28.33■■■□□ 2.13
CLPTM1-201ENST00000337392 RTN4Q9NQC3 1192 aaKnown RBP28.33■■■□□ 2.13
CLPTM1-201ENST00000337392 LMTK3Q96Q04 1460 aa28.33■■■□□ 2.13
CLPTM1-201ENST00000337392 ESYT1Q9BSJ8 1104 aa28.33■■■□□ 2.13
CLPTM1-201ENST00000337392 ATP5J2-PTCD1G3V325 749 aa28.32■■■□□ 2.12
CLPTM1-201ENST00000337392 PTCD1O75127 700 aaKnown RBP28.32■■■□□ 2.12
CLPTM1-201ENST00000337392 PI4K2BQ8TCG2 481 aa28.32■■■□□ 2.12
CLPTM1-201ENST00000337392 EPHA10Q5JZY3 1008 aa28.32■■■□□ 2.12
CLPTM1-201ENST00000337392 TNPO1Q92973 898 aaKnown RBP28.32■■■□□ 2.12
CLPTM1-201ENST00000337392 SCN11AQ9UI33 1791 aa28.32■■■□□ 2.12
CLPTM1-201ENST00000337392 STRCQ7RTU9 1775 aa28.31■■■□□ 2.12
CLPTM1-201ENST00000337392 GRM8O00222 908 aa28.31■■■□□ 2.12
CLPTM1-201ENST00000337392 DCAF5Q96JK2 942 aa28.31■■■□□ 2.12
CLPTM1-201ENST00000337392 LARP1Q6PKG0 1096 aaKnown RBP28.31■■■□□ 2.12
CLPTM1-201ENST00000337392 STAP2Q9UGK3 403 aa28.3■■■□□ 2.12
CLPTM1-201ENST00000337392 OVOS2A0A0G2JMS6 1433 aa28.3■■■□□ 2.12
CLPTM1-201ENST00000337392 PKP1Q13835 747 aa28.3■■■□□ 2.12
CLPTM1-201ENST00000337392 KIF1BPQ96EK5 621 aa28.29■■■□□ 2.12
CLPTM1-201ENST00000337392 REC8O95072 547 aa28.29■■■□□ 2.12
CLPTM1-201ENST00000337392 LINS1Q8NG48 757 aa28.29■■■□□ 2.12
CLPTM1-201ENST00000337392 RABEP1Q15276 862 aa28.28■■■□□ 2.12
CLPTM1-201ENST00000337392 ZGPATQ8N5A5 531 aaKnown RBP28.28■■■□□ 2.12
CLPTM1-201ENST00000337392 BRPF3Q9ULD4 1205 aa28.28■■■□□ 2.12
CLPTM1-201ENST00000337392 SSFA2P28290 1259 aa28.27■■■□□ 2.12
CLPTM1-201ENST00000337392 TUBGCP6Q96RT7 1819 aa28.27■■■□□ 2.12
CLPTM1-201ENST00000337392 ADAMTS7Q9UKP4 1686 aa28.27■■■□□ 2.12
CLPTM1-201ENST00000337392 LRP10Q7Z4F1 713 aa28.27■■■□□ 2.12
CLPTM1-201ENST00000337392 TLR7Q9NYK1 1049 aaKnown RBP28.26■■■□□ 2.11
CLPTM1-201ENST00000337392 ALDH1L1O75891 902 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms