RNA–Protein interactions for RNA: ENST00000337221.8

SCARA3-202, Transcript of scavenger receptor class A member 3, humanhuman

TSL 1 (best) BASIC

Gene SCARA3, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-202ENST00000337221 SNRPA1P09661 255 aaKnown RBP35.08■■■■□ 3.21
SCARA3-202ENST00000337221 PLCH1Q4KWH8 1693 aa35.07■■■■□ 3.21
SCARA3-202ENST00000337221 PAPPAQ13219 1627 aa35.07■■■■□ 3.21
SCARA3-202ENST00000337221 HMMRO75330 724 aa35.07■■■■□ 3.2
SCARA3-202ENST00000337221 UBR2Q8IWV8 1755 aa35.07■■■■□ 3.2
SCARA3-202ENST00000337221 KSR2Q6VAB6 950 aa35.06■■■■□ 3.2
SCARA3-202ENST00000337221 TOGARAM1Q9Y4F4 1720 aa35.06■■■■□ 3.2
SCARA3-202ENST00000337221 IPO9Q96P70 1041 aaKnown RBP35.05■■■■□ 3.2
SCARA3-202ENST00000337221 LAMB4A4D0S4 1761 aa35.05■■■■□ 3.2
SCARA3-202ENST00000337221 USP16Q9Y5T5 823 aa35.04■■■■□ 3.2
SCARA3-202ENST00000337221 UBTFL1P0CB47 393 aaPredicted RBP35.03■■■■□ 3.2
SCARA3-202ENST00000337221 PIP4K2BP78356 416 aa35.03■■■■□ 3.2
SCARA3-202ENST00000337221 MAP3K2Q9Y2U5 619 aa35.03■■■■□ 3.2
SCARA3-202ENST00000337221 LRRFIP2Q9Y608 721 aaKnown RBP35.03■■■■□ 3.2
SCARA3-202ENST00000337221 ATP8B2P98198 1209 aa35.02■■■■□ 3.2
SCARA3-202ENST00000337221 SEC24BO95487 1268 aa35.01■■■■□ 3.2
SCARA3-202ENST00000337221 WNK3Q9BYP7 1800 aa35.01■■■■□ 3.2
SCARA3-202ENST00000337221 NRAPQ86VF7 1730 aa35■■■■□ 3.19
SCARA3-202ENST00000337221 KCPQ6ZWJ8 1503 aa35■■■■□ 3.19
SCARA3-202ENST00000337221 DDX58O95786 925 aaKnown RBP34.98■■■■□ 3.19
SCARA3-202ENST00000337221 LRP10Q7Z4F1 713 aa34.98■■■■□ 3.19
SCARA3-202ENST00000337221 ADAMTS2O95450 1211 aa34.98■■■■□ 3.19
SCARA3-202ENST00000337221 ALDH1L1O75891 902 aa34.97■■■■□ 3.19
SCARA3-202ENST00000337221 TNS2Q63HR2 1409 aa34.97■■■■□ 3.19
SCARA3-202ENST00000337221 PNMA6EA0A0J9YXQ4 647 aa34.96■■■■□ 3.19
SCARA3-202ENST00000337221 MYL6BP14649 208 aa34.96■■■■□ 3.19
SCARA3-202ENST00000337221 AIMP1Q12904 312 aaKnown RBP34.96■■■■□ 3.19
SCARA3-202ENST00000337221 NBPF7P0C2Y1 421 aaPredicted RBP34.95■■■■□ 3.19
SCARA3-202ENST00000337221 BMP2KLQ5H9B9 411 aa34.94■■■■□ 3.18
SCARA3-202ENST00000337221 XAGE3Q8WTP9 111 aa34.94■■■■□ 3.18
SCARA3-202ENST00000337221 PLEKHM2Q8IWE5 1019 aa34.93■■■■□ 3.18
SCARA3-202ENST00000337221 ZBTB47Q9UFB7 747 aaPredicted RBP34.93■■■■□ 3.18
SCARA3-202ENST00000337221 LINS1Q8NG48 757 aa34.92■■■■□ 3.18
SCARA3-202ENST00000337221 COPS6Q7L5N1 327 aa34.91■■■■□ 3.18
SCARA3-202ENST00000337221 UBAP1LF5GYI3 381 aa34.91■■■■□ 3.18
SCARA3-202ENST00000337221 TMOD3Q9NYL9 352 aa34.91■■■■□ 3.18
SCARA3-202ENST00000337221 SMARCA5O60264 1052 aaPredicted RBP34.9■■■■□ 3.18
SCARA3-202ENST00000337221 C16orf71Q8IYS4 520 aaPredicted RBP34.9■■■■□ 3.18
SCARA3-202ENST00000337221 ERBB4Q15303 1308 aa34.89■■■■□ 3.18
SCARA3-202ENST00000337221 ITGB4P16144 1822 aa34.89■■■■□ 3.18
SCARA3-202ENST00000337221 SSH3Q8TE77 659 aa34.89■■■■□ 3.18
SCARA3-202ENST00000337221 LRP6O75581 1613 aa34.89■■■■□ 3.18
SCARA3-202ENST00000337221 NUTM2BA6NNL0 878 aaPredicted RBP34.89■■■■□ 3.18
SCARA3-202ENST00000337221 NUTM2EB1AL46 878 aaPredicted RBP34.89■■■■□ 3.18
SCARA3-202ENST00000337221 APBB1O00213 710 aa34.89■■■■□ 3.18
SCARA3-202ENST00000337221 CWF19L2Q2TBE0 894 aaKnown RBP34.89■■■■□ 3.18
SCARA3-202ENST00000337221 RIC3Q7Z5B4 369 aa34.89■■■■□ 3.18
SCARA3-202ENST00000337221 NUTM2AQ8IVF1 878 aaPredicted RBP34.89■■■■□ 3.18
SCARA3-202ENST00000337221 NWD2Q9ULI1 1742 aa34.88■■■■□ 3.17
SCARA3-202ENST00000337221 PIP4K2AP48426 406 aaPredicted RBP34.88■■■■□ 3.17
SCARA3-202ENST00000337221 EXOC6BQ9Y2D4 811 aa34.88■■■■□ 3.17
SCARA3-202ENST00000337221 IBTKQ9P2D0 1353 aaPredicted RBP34.88■■■■□ 3.17
SCARA3-202ENST00000337221 SPATA31A1Q5TZJ5 1347 aa34.88■■■■□ 3.17
SCARA3-202ENST00000337221 POLA2Q14181 598 aa34.87■■■■□ 3.17
SCARA3-202ENST00000337221 EXOC5O00471 708 aa34.86■■■■□ 3.17
SCARA3-202ENST00000337221 PPP1R42Q7Z4L9 355 aa34.86■■■■□ 3.17
SCARA3-202ENST00000337221 OTUD7AQ8TE49 926 aaPredicted RBP34.85■■■■□ 3.17
SCARA3-202ENST00000337221 PTCD1O75127 700 aaKnown RBP34.85■■■■□ 3.17
SCARA3-202ENST00000337221 IGKV5-2P06315 115 aa34.85■■■■□ 3.17
SCARA3-202ENST00000337221 PIGBQ92521 554 aa34.85■■■■□ 3.17
SCARA3-202ENST00000337221 C9orf78Q9NZ63 289 aaPredicted RBP34.85■■■■□ 3.17
SCARA3-202ENST00000337221 NOP58Q9Y2X3 529 aaKnown RBP34.85■■■■□ 3.17
SCARA3-202ENST00000337221 UTYO14607 1347 aa34.84■■■■□ 3.17
SCARA3-202ENST00000337221 SLIT2O94813 1529 aa34.84■■■■□ 3.17
SCARA3-202ENST00000337221 NBPF26B4DH59 902 aa34.84■■■■□ 3.17
SCARA3-202ENST00000337221 NBPF14Q5TI25 921 aa34.84■■■■□ 3.17
SCARA3-202ENST00000337221 NBPF10Q6P3W6 841 aaKnown RBP34.84■■■■□ 3.17
SCARA3-202ENST00000337221 ANKRD13DQ6ZTN6 518 aa34.84■■■■□ 3.17
SCARA3-202ENST00000337221 NBPF15Q8N660 670 aa34.84■■■■□ 3.17
SCARA3-202ENST00000337221 DDRGK1Q96HY6 314 aa34.84■■■■□ 3.17
SCARA3-202ENST00000337221 METTL22Q9BUU2 404 aaPredicted RBP34.84■■■■□ 3.17
SCARA3-202ENST00000337221 THRAP3Q9Y2W1 955 aaKnown RBP34.84■■■■□ 3.17
SCARA3-202ENST00000337221 CDCA7Q9BWT1 371 aaPredicted RBP34.83■■■■□ 3.17
SCARA3-202ENST00000337221 ARFGEF2Q9Y6D5 1785 aa34.83■■■■□ 3.17
SCARA3-202ENST00000337221 GRM8O00222 908 aa34.81■■■■□ 3.16
SCARA3-202ENST00000337221 GSPT1P15170 499 aaKnown RBP34.81■■■■□ 3.16
SCARA3-202ENST00000337221 NEXNQ0ZGT2 675 aa34.81■■■■□ 3.16
SCARA3-202ENST00000337221 MTX1Q13505 466 aa34.81■■■■□ 3.16
SCARA3-202ENST00000337221 LRRCC1Q9C099 1032 aa34.81■■■■□ 3.16
SCARA3-202ENST00000337221 UPF2Q9HAU5 1272 aaKnown RBP34.81■■■■□ 3.16
SCARA3-202ENST00000337221 TTC22Q5TAA0 569 aa34.8■■■■□ 3.16
SCARA3-202ENST00000337221 HDAC5Q9UQL6 1122 aa34.8■■■■□ 3.16
SCARA3-202ENST00000337221 NEURL1BA8MQ27 555 aa34.79■■■■□ 3.16
SCARA3-202ENST00000337221 SRGAP3O43295 1099 aa34.79■■■■□ 3.16
SCARA3-202ENST00000337221 ASAP1Q9ULH1 1129 aa34.79■■■■□ 3.16
SCARA3-202ENST00000337221 SPATA31A5Q5VU36 1347 aa34.79■■■■□ 3.16
SCARA3-202ENST00000337221 SPATA31A7Q8IWB4 1347 aa34.79■■■■□ 3.16
SCARA3-202ENST00000337221 BCL11AQ9H165 835 aa34.79■■■■□ 3.16
SCARA3-202ENST00000337221 BCL9O00512 1426 aa34.78■■■■□ 3.16
SCARA3-202ENST00000337221 MYD88Q99836 296 aa34.78■■■■□ 3.16
SCARA3-202ENST00000337221 ATG3Q9NT62 314 aa34.78■■■■□ 3.16
SCARA3-202ENST00000337221 TBC1D32Q96NH3 1257 aa34.77■■■■□ 3.16
SCARA3-202ENST00000337221 A1BGP04217 495 aa34.77■■■■□ 3.16
SCARA3-202ENST00000337221 PLBD2Q8NHP8 589 aa34.76■■■■□ 3.15
SCARA3-202ENST00000337221 SALL3Q9BXA9 1300 aa34.75■■■■□ 3.15
SCARA3-202ENST00000337221 GCKRQ14397 625 aa34.75■■■■□ 3.15
SCARA3-202ENST00000337221 VSIG10Q8N0Z9 540 aa34.75■■■■□ 3.15
SCARA3-202ENST00000337221 OSBPL3Q9H4L5 887 aa34.75■■■■□ 3.15
SCARA3-202ENST00000337221 AFDNP55196 1824 aaKnown RBP34.74■■■■□ 3.15
SCARA3-202ENST00000337221 RAB11FIP3O75154 756 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms