RNA–Protein interactions for RNA: ENST00000334000.7

C5orf38-201, Transcript of chromosome 5 open reading frame 38, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C5orf38, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf38-201ENST00000334000 TM4SF1P30408 202 aa28.62■■■□□ 2.17
C5orf38-201ENST00000334000 VSIG10Q8N0Z9 540 aa28.62■■■□□ 2.17
C5orf38-201ENST00000334000 AFDNP55196 1824 aaKnown RBP28.62■■■□□ 2.17
C5orf38-201ENST00000334000 U2AF1L5P0DN76 240 aaPredicted RBP28.61■■■□□ 2.17
C5orf38-201ENST00000334000 C1QTNF8P60827 252 aa28.61■■■□□ 2.17
C5orf38-201ENST00000334000 U2AF1Q01081 240 aaKnown RBP eCLIP28.61■■■□□ 2.17
C5orf38-201ENST00000334000 TEFQ10587 303 aa28.61■■■□□ 2.17
C5orf38-201ENST00000334000 BCL2L12Q9HB09 334 aa28.61■■■□□ 2.17
C5orf38-201ENST00000334000 POLRMTO00411 1230 aaKnown RBP28.6■■■□□ 2.17
C5orf38-201ENST00000334000 ZNF790Q6PG37 636 aa28.6■■■□□ 2.17
C5orf38-201ENST00000334000 BCS1LQ9Y276 419 aa28.6■■■□□ 2.17
C5orf38-201ENST00000334000 HEG1Q9ULI3 1381 aa28.6■■■□□ 2.17
C5orf38-201ENST00000334000 CANXP27824 592 aaKnown RBP28.59■■■□□ 2.17
C5orf38-201ENST00000334000 TTC5Q8N0Z6 440 aa28.59■■■□□ 2.17
C5orf38-201ENST00000334000 ZPR1O75312 459 aa28.58■■■□□ 2.17
C5orf38-201ENST00000334000 NARFQ9UHQ1 456 aa28.58■■■□□ 2.17
C5orf38-201ENST00000334000 NUDCQ9Y266 331 aa28.58■■■□□ 2.17
C5orf38-201ENST00000334000 NFIXQ14938 502 aa28.57■■■□□ 2.16
C5orf38-201ENST00000334000 GIGYF1O75420 1035 aaPredicted RBP28.56■■■□□ 2.16
C5orf38-201ENST00000334000 NRXN2Q9P2S2 1712 aa28.56■■■□□ 2.16
C5orf38-201ENST00000334000 EIF5P55010 431 aaKnown RBP28.55■■■□□ 2.16
C5orf38-201ENST00000334000 ARFGEF1Q9Y6D6 1849 aa28.55■■■□□ 2.16
C5orf38-201ENST00000334000 CHRNA5P30532 468 aa28.54■■■□□ 2.16
C5orf38-201ENST00000334000 DCTN1Q14203 1278 aa28.54■■■□□ 2.16
C5orf38-201ENST00000334000 MCM10Q7L590 875 aa28.54■■■□□ 2.16
C5orf38-201ENST00000334000 FCHSD2O94868 740 aa28.53■■■□□ 2.16
C5orf38-201ENST00000334000 ZNF526Q8TF50 670 aaPredicted RBP28.53■■■□□ 2.16
C5orf38-201ENST00000334000 DLG5Q8TDM6 1919 aa28.51■■■□□ 2.16
C5orf38-201ENST00000334000 BTBD11A6QL63 1104 aa28.51■■■□□ 2.15
C5orf38-201ENST00000334000 STARD3NLO95772 234 aa28.51■■■□□ 2.15
C5orf38-201ENST00000334000 PRAMEF22A3QJZ6 481 aa28.5■■■□□ 2.15
C5orf38-201ENST00000334000 A1BGP04217 495 aa28.5■■■□□ 2.15
C5orf38-201ENST00000334000 FMNL2Q96PY5 1086 aa28.5■■■□□ 2.15
C5orf38-201ENST00000334000 SCN7AQ01118 1682 aa28.5■■■□□ 2.15
C5orf38-201ENST00000334000 ARHGAP27Q6ZUM4 889 aa28.48■■■□□ 2.15
C5orf38-201ENST00000334000 CARMIL3Q8ND23 1372 aa28.48■■■□□ 2.15
C5orf38-201ENST00000334000 SENP3-EIF4A1A0A087X0R7 540 aa28.47■■■□□ 2.15
C5orf38-201ENST00000334000 GPBP1L1Q9HC44 474 aaPredicted RBP28.47■■■□□ 2.15
C5orf38-201ENST00000334000 PIM2Q9P1W9 311 aa28.47■■■□□ 2.15
C5orf38-201ENST00000334000 TBC1D2BQ9UPU7 963 aa28.47■■■□□ 2.15
C5orf38-201ENST00000334000 USP16Q9Y5T5 823 aa28.47■■■□□ 2.15
C5orf38-201ENST00000334000 SERPINB2P05120 415 aa28.46■■■□□ 2.15
C5orf38-201ENST00000334000 PIP4K2AP48426 406 aaPredicted RBP28.46■■■□□ 2.15
C5orf38-201ENST00000334000 DDX10Q13206 875 aaKnown RBP28.46■■■□□ 2.15
C5orf38-201ENST00000334000 BICDL1Q6ZP65 573 aa28.46■■■□□ 2.15
C5orf38-201ENST00000334000 ZNF330Q9Y3S2 320 aaPredicted RBP28.46■■■□□ 2.15
C5orf38-201ENST00000334000 TBC1D9BQ66K14 1250 aa28.45■■■□□ 2.14
C5orf38-201ENST00000334000 TEX13AQ9BXU3 409 aaPredicted RBP28.45■■■□□ 2.14
C5orf38-201ENST00000334000 ANKRD31Q8N7Z5 1873 aa28.44■■■□□ 2.14
C5orf38-201ENST00000334000 RTF1Q92541 710 aaKnown RBP28.44■■■□□ 2.14
C5orf38-201ENST00000334000 DLEC1Q9Y238 1755 aa28.44■■■□□ 2.14
C5orf38-201ENST00000334000 IL6STP40189 918 aaPredicted RBP28.43■■■□□ 2.14
C5orf38-201ENST00000334000 PLEKHF1Q96S99 279 aa28.43■■■□□ 2.14
C5orf38-201ENST00000334000 BCORQ6W2J9 1755 aa28.42■■■□□ 2.14
C5orf38-201ENST00000334000 DALRD3Q5D0E6 543 aaKnown RBP28.42■■■□□ 2.14
C5orf38-201ENST00000334000 A0A087WZG4 1122 aa28.41■■■□□ 2.14
C5orf38-201ENST00000334000 MIS18AQ9NYP9 233 aa28.41■■■□□ 2.14
C5orf38-201ENST00000334000 SBF1O95248 1867 aa28.4■■■□□ 2.14
C5orf38-201ENST00000334000 CAMTA2O94983 1202 aa28.4■■■□□ 2.14
C5orf38-201ENST00000334000 HTATSF1O43719 755 aaKnown RBP28.39■■■□□ 2.14
C5orf38-201ENST00000334000 CCDC24Q8N4L8 307 aa28.39■■■□□ 2.14
C5orf38-201ENST00000334000 KIF3CO14782 793 aa28.38■■■□□ 2.13
C5orf38-201ENST00000334000 KDM3BQ7LBC6 1761 aa28.37■■■□□ 2.13
C5orf38-201ENST00000334000 C9orf131Q5VYM1 1079 aa28.37■■■□□ 2.13
C5orf38-201ENST00000334000 THUMPD2Q9BTF0 503 aaKnown RBP28.37■■■□□ 2.13
C5orf38-201ENST00000334000 COL11A2P13942 1736 aaPredicted RBP28.36■■■□□ 2.13
C5orf38-201ENST00000334000 NBPF26B4DH59 902 aa28.36■■■□□ 2.13
C5orf38-201ENST00000334000 SNRPA1P09661 255 aaKnown RBP28.36■■■□□ 2.13
C5orf38-201ENST00000334000 NBPF10Q6P3W6 841 aaKnown RBP28.36■■■□□ 2.13
C5orf38-201ENST00000334000 NBPF15Q8N660 670 aa28.36■■■□□ 2.13
C5orf38-201ENST00000334000 TAF7Q15545 349 aaPredicted RBP28.35■■■□□ 2.13
C5orf38-201ENST00000334000 ZNF316A6NFI3 1004 aaPredicted RBP28.34■■■□□ 2.13
C5orf38-201ENST00000334000 NEFMP07197 916 aa28.34■■■□□ 2.13
C5orf38-201ENST00000334000 DZIP3Q86Y13 1208 aaKnown RBP28.34■■■□□ 2.13
C5orf38-201ENST00000334000 C2CD5Q86YS7 1000 aa28.34■■■□□ 2.13
C5orf38-201ENST00000334000 LAMB4A4D0S4 1761 aa28.33■■■□□ 2.13
C5orf38-201ENST00000334000 PRR5LQ6MZQ0 368 aa28.33■■■□□ 2.13
C5orf38-201ENST00000334000 PRELPP51888 382 aa28.32■■■□□ 2.12
C5orf38-201ENST00000334000 RASSF7Q02833 373 aa28.32■■■□□ 2.12
C5orf38-201ENST00000334000 NFE2L2Q16236 605 aa28.32■■■□□ 2.12
C5orf38-201ENST00000334000 NMRK2Q9NPI5 230 aa28.3■■■□□ 2.12
C5orf38-201ENST00000334000 RNF181Q9P0P0 153 aa28.29■■■□□ 2.12
C5orf38-201ENST00000334000 CCDC88AQ3V6T2 1871 aa28.29■■■□□ 2.12
C5orf38-201ENST00000334000 TTLL6Q8N841 843 aa28.28■■■□□ 2.12
C5orf38-201ENST00000334000 PNNQ9H307 717 aaKnown RBP28.28■■■□□ 2.12
C5orf38-201ENST00000334000 H0YIN7 160 aa28.27■■■□□ 2.12
C5orf38-201ENST00000334000 RALBP1Q15311 655 aa28.27■■■□□ 2.12
C5orf38-201ENST00000334000 SETDB2Q96T68 719 aa28.27■■■□□ 2.12
C5orf38-201ENST00000334000 CACNA1SQ13698 1873 aa28.26■■■□□ 2.11
C5orf38-201ENST00000334000 NPM2Q86SE8 214 aaKnown RBP28.26■■■□□ 2.11
C5orf38-201ENST00000334000 BRIP1Q9BX63 1249 aa28.26■■■□□ 2.11
C5orf38-201ENST00000334000 EIF4A1P60842 406 aaKnown RBP28.25■■■□□ 2.11
C5orf38-201ENST00000334000 CNBD1Q8NA66 436 aa28.24■■■□□ 2.11
C5orf38-201ENST00000334000 MAPK8IP3Q9UPT6 1336 aa28.23■■■□□ 2.11
C5orf38-201ENST00000334000 SLX4Q8IY92 1834 aa28.23■■■□□ 2.11
C5orf38-201ENST00000334000 ZNF622Q969S3 477 aaKnown RBP eCLIP28.23■■■□□ 2.11
C5orf38-201ENST00000334000 NFKBIEO00221 500 aa28.22■■■□□ 2.11
C5orf38-201ENST00000334000 HLFQ16534 295 aa28.22■■■□□ 2.11
C5orf38-201ENST00000334000 PDE6BP35913 854 aa28.21■■■□□ 2.11
C5orf38-201ENST00000334000 CLEC4GQ6UXB4 293 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms