RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ANXA1P04083 346 aa14.99□□□□□ -0.01
VPS33B-201ENST00000333371 PLEKHG5O94827 1062 aa14.98□□□□□ -0.01
VPS33B-201ENST00000333371 UBE2Q2Q8WVN8 375 aa14.98□□□□□ -0.01
VPS33B-201ENST00000333371 CACNA1FO60840 1977 aa14.98□□□□□ -0.01
VPS33B-201ENST00000333371 BRD1O95696 1058 aa14.98□□□□□ -0.01
VPS33B-201ENST00000333371 UBTFL1P0CB47 393 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-201ENST00000333371 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
VPS33B-201ENST00000333371 PPP1R42Q7Z4L9 355 aa14.97□□□□□ -0.01
VPS33B-201ENST00000333371 PROSER2Q86WR7 435 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-201ENST00000333371 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
VPS33B-201ENST00000333371 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
VPS33B-201ENST00000333371 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
VPS33B-201ENST00000333371 GADD45BO75293 160 aaPredicted RBP14.96□□□□□ -0.01
VPS33B-201ENST00000333371 NBPF7P0C2Y1 421 aaPredicted RBP14.96□□□□□ -0.01
VPS33B-201ENST00000333371 MCCP23508 829 aa14.96□□□□□ -0.01
VPS33B-201ENST00000333371 CUL4AQ13619 759 aa14.96□□□□□ -0.01
VPS33B-201ENST00000333371 KIAA1211Q6ZU35 1233 aa14.96□□□□□ -0.01
VPS33B-201ENST00000333371 KCNH5Q8NCM2 988 aa14.96□□□□□ -0.01
VPS33B-201ENST00000333371 MSNP26038 577 aaKnown RBP14.96□□□□□ -0.01
VPS33B-201ENST00000333371 XPCQ01831 940 aaPredicted RBP14.96□□□□□ -0.01
VPS33B-201ENST00000333371 TAF7Q15545 349 aaPredicted RBP14.96□□□□□ -0.01
VPS33B-201ENST00000333371 LRSAM1Q6UWE0 723 aa14.96□□□□□ -0.01
VPS33B-201ENST00000333371 ORAI2Q96SN7 254 aa14.96□□□□□ -0.01
VPS33B-201ENST00000333371 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
VPS33B-201ENST00000333371 NWD1Q149M9 1564 aa14.96□□□□□ -0.02
VPS33B-201ENST00000333371 KCNQ3O43525 872 aa14.96□□□□□ -0.02
VPS33B-201ENST00000333371 HTATSF1O43719 755 aaKnown RBP14.96□□□□□ -0.02
VPS33B-201ENST00000333371 IP6K1Q92551 441 aa14.96□□□□□ -0.02
VPS33B-201ENST00000333371 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.96□□□□□ -0.02
VPS33B-201ENST00000333371 MAP3K5Q99683 1374 aa14.95□□□□□ -0.02
VPS33B-201ENST00000333371 SOS1Q07889 1333 aaPredicted RBP14.95□□□□□ -0.02
VPS33B-201ENST00000333371 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
VPS33B-201ENST00000333371 CPA1P15085 419 aa14.94□□□□□ -0.02
VPS33B-201ENST00000333371 SRGAP3O43295 1099 aa14.94□□□□□ -0.02
VPS33B-201ENST00000333371 MPNDQ8N594 471 aa14.94□□□□□ -0.02
VPS33B-201ENST00000333371 SSH3Q8TE77 659 aa14.94□□□□□ -0.02
VPS33B-201ENST00000333371 PDLIM2Q96JY6 352 aa14.94□□□□□ -0.02
VPS33B-201ENST00000333371 HSP90AA2PQ14568 343 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-201ENST00000333371 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
VPS33B-201ENST00000333371 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
VPS33B-201ENST00000333371 RHPN1Q8TCX5 695 aa14.93□□□□□ -0.02
VPS33B-201ENST00000333371 CHPF2Q9P2E5 772 aa14.93□□□□□ -0.02
VPS33B-201ENST00000333371 SPG7Q9UQ90 795 aa14.93□□□□□ -0.02
VPS33B-201ENST00000333371 NFAT5O94916 1531 aa14.93□□□□□ -0.02
VPS33B-201ENST00000333371 MCM2P49736 904 aa14.92□□□□□ -0.02
VPS33B-201ENST00000333371 ANAPC15P60006 121 aa14.92□□□□□ -0.02
VPS33B-201ENST00000333371 PI4KAP2A4QPH2 592 aa14.91□□□□□ -0.02
VPS33B-201ENST00000333371 HSPA4P34932 840 aa14.91□□□□□ -0.02
VPS33B-201ENST00000333371 CWC27Q6UX04 472 aaKnown RBP14.91□□□□□ -0.02
VPS33B-201ENST00000333371 PI4KAP1Q8N8J0 262 aa14.91□□□□□ -0.02
VPS33B-201ENST00000333371 SRCIN1Q9C0H9 1055 aa14.91□□□□□ -0.02
VPS33B-201ENST00000333371 N4BP2Q86UW6 1770 aaPredicted RBP14.91□□□□□ -0.02
VPS33B-201ENST00000333371 USP48Q86UV5 1035 aa14.91□□□□□ -0.02
VPS33B-201ENST00000333371 DDX54Q8TDD1 881 aaKnown RBP14.91□□□□□ -0.02
VPS33B-201ENST00000333371 INTS4Q96HW7 963 aaKnown RBP14.9□□□□□ -0.02
VPS33B-201ENST00000333371 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 OFD1O75665 1012 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 MBD3O95983 291 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 GCP02774 474 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
VPS33B-201ENST00000333371 NOL7Q9UMY1 257 aaKnown RBP14.9□□□□□ -0.02
VPS33B-201ENST00000333371 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
VPS33B-201ENST00000333371 RPAP1Q9BWH6 1393 aaPredicted RBP14.89□□□□□ -0.03
VPS33B-201ENST00000333371 SGSM2O43147 1006 aa14.89□□□□□ -0.03
VPS33B-201ENST00000333371 POLA2Q14181 598 aa14.89□□□□□ -0.03
VPS33B-201ENST00000333371 KRT28Q7Z3Y7 464 aa14.89□□□□□ -0.03
VPS33B-201ENST00000333371 CNPY2Q9Y2B0 182 aa14.89□□□□□ -0.03
VPS33B-201ENST00000333371 LARGE1O95461 756 aa14.89□□□□□ -0.03
VPS33B-201ENST00000333371 AK2P54819 239 aa14.89□□□□□ -0.03
VPS33B-201ENST00000333371 LRRC59Q96AG4 307 aaKnown RBP14.89□□□□□ -0.03
VPS33B-201ENST00000333371 EIF4A1P60842 406 aaKnown RBP14.88□□□□□ -0.03
VPS33B-201ENST00000333371 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
VPS33B-201ENST00000333371 RAD50Q92878 1312 aa14.88□□□□□ -0.03
VPS33B-201ENST00000333371 ATF3P18847 181 aa14.88□□□□□ -0.03
VPS33B-201ENST00000333371 BEND3Q5T5X7 828 aa14.88□□□□□ -0.03
VPS33B-201ENST00000333371 MPRIPQ6WCQ1 1025 aa14.88□□□□□ -0.03
VPS33B-201ENST00000333371 PA2G4Q9UQ80 394 aaKnown RBP14.88□□□□□ -0.03
VPS33B-201ENST00000333371 OS9Q13438 667 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-201ENST00000333371 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
VPS33B-201ENST00000333371 DNAAF4Q8WXU2 420 aa14.87□□□□□ -0.03
VPS33B-201ENST00000333371 TSPY26PQ9H489 355 aa14.87□□□□□ -0.03
VPS33B-201ENST00000333371 KIF1AQ12756 1690 aa14.87□□□□□ -0.03
VPS33B-201ENST00000333371 PXDNLA1KZ92 1463 aa14.87□□□□□ -0.03
VPS33B-201ENST00000333371 C1orf167Q5SNV9 1468 aa14.87□□□□□ -0.03
VPS33B-201ENST00000333371 RBM10P98175 930 aaKnown RBP14.87□□□□□ -0.03
VPS33B-201ENST00000333371 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
VPS33B-201ENST00000333371 PRAMEF22A3QJZ6 481 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 ZKSCAN5Q9Y2L8 839 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 AOX1Q06278 1338 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 RAB11FIP3O75154 756 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 PTH1RQ03431 593 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 COL9A3Q14050 684 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-201ENST00000333371 PROSER3Q2NL68 480 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 ARHGEF25Q86VW2 580 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 TTC14Q96N46 770 aa14.86□□□□□ -0.03
VPS33B-201ENST00000333371 BABAM1Q9NWV8 329 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms