RNA–Protein interactions for RNA: ENST00000332029.2

SOCS1-201, Transcript of suppressor of cytokine signaling 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS1, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS1-201ENST00000332029 VSIG10Q8N0Z9 540 aa28.42■■■□□ 2.14
SOCS1-201ENST00000332029 NARFQ9UHQ1 456 aa28.42■■■□□ 2.14
SOCS1-201ENST00000332029 COL3A1P02461 1466 aaPredicted RBP28.41■■■□□ 2.14
SOCS1-201ENST00000332029 C9orf131Q5VYM1 1079 aa28.41■■■□□ 2.14
SOCS1-201ENST00000332029 ARFGEF1Q9Y6D6 1849 aa28.39■■■□□ 2.14
SOCS1-201ENST00000332029 U2SURPO15042 1029 aaKnown RBP28.39■■■□□ 2.14
SOCS1-201ENST00000332029 NFIXQ14938 502 aa28.39■■■□□ 2.14
SOCS1-201ENST00000332029 TTC5Q8N0Z6 440 aa28.38■■■□□ 2.13
SOCS1-201ENST00000332029 VIRMAQ69YN4 1812 aaKnown RBP28.37■■■□□ 2.13
SOCS1-201ENST00000332029 NMRK2Q9NPI5 230 aa28.37■■■□□ 2.13
SOCS1-201ENST00000332029 TOMM70O94826 608 aa28.36■■■□□ 2.13
SOCS1-201ENST00000332029 GAS2L2Q8NHY3 880 aa28.36■■■□□ 2.13
SOCS1-201ENST00000332029 CANXP27824 592 aaKnown RBP28.35■■■□□ 2.13
SOCS1-201ENST00000332029 BCL2L12Q9HB09 334 aa28.35■■■□□ 2.13
SOCS1-201ENST00000332029 UBR2Q8IWV8 1755 aa28.34■■■□□ 2.13
SOCS1-201ENST00000332029 GNAT3A8MTJ3 354 aa28.34■■■□□ 2.13
SOCS1-201ENST00000332029 STARD3NLO95772 234 aa28.34■■■□□ 2.13
SOCS1-201ENST00000332029 TEFQ10587 303 aa28.34■■■□□ 2.13
SOCS1-201ENST00000332029 SERPINB2P05120 415 aa28.33■■■□□ 2.13
SOCS1-201ENST00000332029 IL17REQ8NFR9 667 aa28.33■■■□□ 2.13
SOCS1-201ENST00000332029 RNF181Q9P0P0 153 aa28.33■■■□□ 2.13
SOCS1-201ENST00000332029 ZNF496Q96IT1 587 aaPredicted RBP28.32■■■□□ 2.12
SOCS1-201ENST00000332029 ZNF790Q6PG37 636 aa28.31■■■□□ 2.12
SOCS1-201ENST00000332029 NRXN2Q9P2S2 1712 aa28.3■■■□□ 2.12
SOCS1-201ENST00000332029 HEG1Q9ULI3 1381 aa28.3■■■□□ 2.12
SOCS1-201ENST00000332029 APLP1P51693 650 aa28.3■■■□□ 2.12
SOCS1-201ENST00000332029 EIF5P55010 431 aaKnown RBP28.3■■■□□ 2.12
SOCS1-201ENST00000332029 CFAP53Q96M91 514 aa28.3■■■□□ 2.12
SOCS1-201ENST00000332029 A0A087WZG4 1122 aa28.29■■■□□ 2.12
SOCS1-201ENST00000332029 KDM2BQ8NHM5 1336 aa28.28■■■□□ 2.12
SOCS1-201ENST00000332029 AFDNP55196 1824 aaKnown RBP28.28■■■□□ 2.12
SOCS1-201ENST00000332029 TEX13AQ9BXU3 409 aaPredicted RBP28.28■■■□□ 2.12
SOCS1-201ENST00000332029 BICDL1Q6ZP65 573 aa28.27■■■□□ 2.12
SOCS1-201ENST00000332029 C16orf71Q8IYS4 520 aaPredicted RBP28.26■■■□□ 2.11
SOCS1-201ENST00000332029 CARMIL3Q8ND23 1372 aa28.25■■■□□ 2.11
SOCS1-201ENST00000332029 PPP2R1AP30153 589 aa28.25■■■□□ 2.11
SOCS1-201ENST00000332029 RASSF7Q02833 373 aa28.25■■■□□ 2.11
SOCS1-201ENST00000332029 C2CD5Q86YS7 1000 aa28.25■■■□□ 2.11
SOCS1-201ENST00000332029 RBM46Q8TBY0 533 aaKnown RBP28.25■■■□□ 2.11
SOCS1-201ENST00000332029 CEMIPQ8WUJ3 1361 aa28.24■■■□□ 2.11
SOCS1-201ENST00000332029 PRKAR2BP31323 418 aa28.24■■■□□ 2.11
SOCS1-201ENST00000332029 TTLL6Q8N841 843 aa28.24■■■□□ 2.11
SOCS1-201ENST00000332029 PHACTR3Q96KR7 559 aa28.24■■■□□ 2.11
SOCS1-201ENST00000332029 FMNL2Q96PY5 1086 aa28.24■■■□□ 2.11
SOCS1-201ENST00000332029 ZNF330Q9Y3S2 320 aaPredicted RBP28.24■■■□□ 2.11
SOCS1-201ENST00000332029 H0YIN7 160 aa28.23■■■□□ 2.11
SOCS1-201ENST00000332029 IFFO2Q5TF58 517 aa28.23■■■□□ 2.11
SOCS1-201ENST00000332029 TBC1D9BQ66K14 1250 aa28.23■■■□□ 2.11
SOCS1-201ENST00000332029 RSPH6AQ9H0K4 717 aa28.23■■■□□ 2.11
SOCS1-201ENST00000332029 NUDCQ9Y266 331 aa28.23■■■□□ 2.11
SOCS1-201ENST00000332029 SIPA1L3O60292 1781 aaPredicted RBP28.22■■■□□ 2.11
SOCS1-201ENST00000332029 IL6STP40189 918 aaPredicted RBP28.22■■■□□ 2.11
SOCS1-201ENST00000332029 TBC1D2BQ9UPU7 963 aa28.22■■■□□ 2.11
SOCS1-201ENST00000332029 DLEC1Q9Y238 1755 aa28.2■■■□□ 2.11
SOCS1-201ENST00000332029 BTBD11A6QL63 1104 aa28.2■■■□□ 2.1
SOCS1-201ENST00000332029 RRAGCQ9HB90 399 aa28.2■■■□□ 2.1
SOCS1-201ENST00000332029 SCN7AQ01118 1682 aa28.19■■■□□ 2.1
SOCS1-201ENST00000332029 ZC3H4Q9UPT8 1303 aaKnown RBP28.19■■■□□ 2.1
SOCS1-201ENST00000332029 LMNB1P20700 586 aa28.19■■■□□ 2.1
SOCS1-201ENST00000332029 SBF1O95248 1867 aa28.19■■■□□ 2.1
SOCS1-201ENST00000332029 KCNQ3O43525 872 aa28.18■■■□□ 2.1
SOCS1-201ENST00000332029 A1BGP04217 495 aa28.18■■■□□ 2.1
SOCS1-201ENST00000332029 FSTL1Q12841 308 aa28.18■■■□□ 2.1
SOCS1-201ENST00000332029 NPM2Q86SE8 214 aaKnown RBP28.18■■■□□ 2.1
SOCS1-201ENST00000332029 U2AF1L5P0DN76 240 aaPredicted RBP28.17■■■□□ 2.1
SOCS1-201ENST00000332029 U2AF1Q01081 240 aaKnown RBP eCLIP28.17■■■□□ 2.1
SOCS1-201ENST00000332029 DNAJC5GQ8N7S2 189 aa28.17■■■□□ 2.1
SOCS1-201ENST00000332029 PRELPP51888 382 aa28.16■■■□□ 2.1
SOCS1-201ENST00000332029 PRR5LQ6MZQ0 368 aa28.16■■■□□ 2.1
SOCS1-201ENST00000332029 BRIP1Q9BX63 1249 aa28.16■■■□□ 2.1
SOCS1-201ENST00000332029 CAMTA2O94983 1202 aa28.15■■■□□ 2.1
SOCS1-201ENST00000332029 PDE6BP35913 854 aa28.15■■■□□ 2.1
SOCS1-201ENST00000332029 ZNF622Q969S3 477 aaKnown RBP eCLIP28.15■■■□□ 2.1
SOCS1-201ENST00000332029 PDZRN3Q9UPQ7 1066 aa28.15■■■□□ 2.1
SOCS1-201ENST00000332029 TNRC6CQ9HCJ0 1690 aaKnown RBP28.15■■■□□ 2.1
SOCS1-201ENST00000332029 NFKBIEO00221 500 aa28.14■■■□□ 2.1
SOCS1-201ENST00000332029 CCDC24Q8N4L8 307 aa28.14■■■□□ 2.1
SOCS1-201ENST00000332029 RTF1Q92541 710 aaKnown RBP28.13■■■□□ 2.09
SOCS1-201ENST00000332029 SETDB2Q96T68 719 aa28.13■■■□□ 2.09
SOCS1-201ENST00000332029 DZIP3Q86Y13 1208 aaKnown RBP28.12■■■□□ 2.09
SOCS1-201ENST00000332029 ANKRD31Q8N7Z5 1873 aa28.11■■■□□ 2.09
SOCS1-201ENST00000332029 GLTPD2A6NH11 291 aa28.11■■■□□ 2.09
SOCS1-201ENST00000332029 MCM10Q7L590 875 aa28.11■■■□□ 2.09
SOCS1-201ENST00000332029 CNBD1Q8NA66 436 aa28.11■■■□□ 2.09
SOCS1-201ENST00000332029 USP16Q9Y5T5 823 aa28.11■■■□□ 2.09
SOCS1-201ENST00000332029 NPHP1O15259 732 aa28.1■■■□□ 2.09
SOCS1-201ENST00000332029 WDR90Q96KV7 1748 aa28.09■■■□□ 2.09
SOCS1-201ENST00000332029 PRAMEF22A3QJZ6 481 aa28.09■■■□□ 2.09
SOCS1-201ENST00000332029 PIP4K2AP48426 406 aaPredicted RBP28.09■■■□□ 2.09
SOCS1-201ENST00000332029 HTRA3P83110 453 aa28.09■■■□□ 2.09
SOCS1-201ENST00000332029 SMC1BQ8NDV3 1235 aa28.09■■■□□ 2.09
SOCS1-201ENST00000332029 ZNF219Q9P2Y4 722 aaPredicted RBP28.09■■■□□ 2.09
SOCS1-201ENST00000332029 C21orf2O43822 256 aa28.08■■■□□ 2.09
SOCS1-201ENST00000332029 SNRPA1P09661 255 aaKnown RBP28.08■■■□□ 2.09
SOCS1-201ENST00000332029 ST5P78524 1137 aa28.08■■■□□ 2.09
SOCS1-201ENST00000332029 COL11A2P13942 1736 aaPredicted RBP28.06■■■□□ 2.08
SOCS1-201ENST00000332029 VEGFAP15692 232 aaPredicted RBP28.06■■■□□ 2.08
SOCS1-201ENST00000332029 DCTN1Q14203 1278 aa28.06■■■□□ 2.08
SOCS1-201ENST00000332029 TIAM2Q8IVF5 1701 aa28.06■■■□□ 2.08
SOCS1-201ENST00000332029 BCORQ6W2J9 1755 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms