RNA–Protein interactions for RNA: ENST00000330276.4

SV2B-201, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SV2B, Length 11,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-201ENST00000330276 CCDC129Q6ZRS4 1044 aa6.74□□□□□ -1.33
SV2B-201ENST00000330276 PDRG1Q9NUG6 133 aa6.74□□□□□ -1.33
SV2B-201ENST00000330276 ST20-MTHFSA0A0A6YYL1 179 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 VPS36Q86VN1 386 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 CCDC150Q8NCX0 1101 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 TTC14Q96N46 770 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 PPP1R12CQ9BZL4 782 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 STMN4Q9H169 189 aaPredicted RBP6.73□□□□□ -1.33
SV2B-201ENST00000330276 ANKRD30AQ9BXX3 1397 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 VCXQ9H320 206 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 FRMD3A2A2Y4 597 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 XRCC6P12956 609 aaKnown RBP eCLIP6.73□□□□□ -1.33
SV2B-201ENST00000330276 ERCC3P19447 782 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 CCDC96Q2M329 555 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 PFDN1O60925 122 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 SH3BGRP55822 239 aaPredicted RBP6.73□□□□□ -1.33
SV2B-201ENST00000330276 MAP3K9P80192 1104 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 CCDC38Q502W7 563 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 LRRC43Q8N309 656 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 SREK1Q8WXA9 508 aaKnown RBP6.73□□□□□ -1.33
SV2B-201ENST00000330276 SELENOSQ9BQE4 189 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 VCX3BQ9H321 246 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 ZC4H2Q9NQZ6 224 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 FAM76AQ8TAV0 307 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 CPLX3Q8WVH0 158 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 RUNDC1Q96C34 613 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 DHX57Q6P158 1386 aaKnown RBP6.73□□□□□ -1.33
SV2B-201ENST00000330276 MAP7Q14244 749 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 CPLX4Q7Z7G2 160 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 NEUROD6Q96NK8 337 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 PHACTR2O75167 634 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 POTEJP0CG39 1038 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 EHBP1Q8NDI1 1231 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 SPATS2LQ9NUQ6 558 aaKnown RBP6.73□□□□□ -1.33
SV2B-201ENST00000330276 PEX19P40855 299 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 CTAGE6Q86UF2 777 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 IKBKGQ9Y6K9 419 aa6.73□□□□□ -1.33
SV2B-201ENST00000330276 PDS5BQ9NTI5 1447 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 STMN1P16949 149 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 PRR16Q569H4 304 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 PIK3R5Q8WYR1 880 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 CTAGE5O15320 804 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 CFAP58Q5T655 872 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 HDXQ7Z353 690 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 NUMA1Q14980 2115 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 TPD52P55327 224 aaPredicted RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 MRFAP1L1Q96HT8 127 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 NUP155O75694 1391 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 SMG6Q86US8 1419 aaKnown RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 CUX1P39880 1505 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 AIMP1Q12904 312 aaKnown RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 FKBP15Q5T1M5 1219 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 YEATS4O95619 227 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 U2AF2P26368 475 aaKnown RBP eCLIP6.72□□□□□ -1.33
SV2B-201ENST00000330276 CDCA7LQ96GN5 454 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 SAMD15Q9P1V8 674 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 MACROD2A1Z1Q3 448 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 UBTFL1P0CB47 393 aaPredicted RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 PRPF4BQ13523 1007 aaKnown RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 UVSSAQ2YD98 709 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 CCDC170Q8IYT3 715 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 ZNF428Q96B54 188 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 MICAL1Q8TDZ2 1067 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 CTAGE9A4FU28 777 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 SLU7O95391 586 aaKnown RBP6.72□□□□□ -1.33
SV2B-201ENST00000330276 C1orf141Q5JVX7 400 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 CACNA2D4Q7Z3S7 1137 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.72□□□□□ -1.33
SV2B-201ENST00000330276 AFAP1L1Q8TED9 768 aa6.72□□□□□ -1.33
SV2B-201ENST00000330276 DDX12PQ92771 950 aa6.71□□□□□ -1.33
SV2B-201ENST00000330276 JAKMIP1Q96N16 626 aaKnown RBP6.71□□□□□ -1.33
SV2B-201ENST00000330276 MKRN1Q9UHC7 482 aaKnown RBP6.71□□□□□ -1.33
SV2B-201ENST00000330276 DNAI1Q9UI46 699 aa6.71□□□□□ -1.33
SV2B-201ENST00000330276 TUBB4BP68371 445 aa6.71□□□□□ -1.33
SV2B-201ENST00000330276 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.33
SV2B-201ENST00000330276 WWC2Q6AWC2 1192 aa6.71□□□□□ -1.33
SV2B-201ENST00000330276 AEBP2Q6ZN18 517 aaPredicted RBP6.71□□□□□ -1.33
SV2B-201ENST00000330276 CEP85LQ5SZL2 805 aa6.71□□□□□ -1.34
SV2B-201ENST00000330276 NOB1Q9ULX3 412 aaKnown RBP6.71□□□□□ -1.34
SV2B-201ENST00000330276 PPP6R1Q9UPN7 881 aa6.71□□□□□ -1.34
SV2B-201ENST00000330276 RNF8O76064 485 aa6.71□□□□□ -1.34
SV2B-201ENST00000330276 IKQ13123 557 aaPredicted RBP6.71□□□□□ -1.34
SV2B-201ENST00000330276 PPFIA2O75334 1257 aa6.71□□□□□ -1.34
SV2B-201ENST00000330276 CCDC110Q8TBZ0 833 aa6.71□□□□□ -1.34
SV2B-201ENST00000330276 GGT6Q6P531 493 aa6.71□□□□□ -1.34
SV2B-201ENST00000330276 USH1CQ9Y6N9 552 aa6.71□□□□□ -1.34
SV2B-201ENST00000330276 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
SV2B-201ENST00000330276 GCC1Q96CN9 775 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 ZKSCAN5Q9Y2L8 839 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 RUFY3Q7L099 469 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 PHLDB2Q86SQ0 1253 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 TBC1D2Q9BYX2 928 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 CAVIN2O95810 425 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 SETDB1Q15047 1291 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 CCDC69A6NI79 296 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 SKAP1Q86WV1 359 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 PSMC4P43686 418 aa6.7□□□□□ -1.34
SV2B-201ENST00000330276 PIP4K2BP78356 416 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms