RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ESYT1Q9BSJ8 1104 aa9.96□□□□□ -0.82
SKA2-201ENST00000330137 L2HGDHQ9H9P8 463 aa9.96□□□□□ -0.82
SKA2-201ENST00000330137 ARGLU1Q9NWB6 273 aaPredicted RBP9.96□□□□□ -0.82
SKA2-201ENST00000330137 CLGNO14967 610 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 HMMRO75330 724 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 F13A1P00488 732 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 NOP2P46087 812 aaKnown RBP9.95□□□□□ -0.82
SKA2-201ENST00000330137 ZNF75DP51815 510 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 MAP3K11Q16584 847 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 GOLGA6L1Q8N7Z2 621 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 IQUBQ8NA54 791 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 EFCAB6Q5THR3 1501 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 TCHHQ07283 1943 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 AATKQ6ZMQ8 1374 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 PTPRCP08575 1304 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 AOX1Q06278 1338 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 STX6O43752 255 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 ZNF853P0CG23 659 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
SKA2-201ENST00000330137 PAXIP1Q6ZW49 1069 aaPredicted RBP9.95□□□□□ -0.82
SKA2-201ENST00000330137 CLTCQ00610 1675 aaKnown RBP9.95□□□□□ -0.82
SKA2-201ENST00000330137 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
SKA2-201ENST00000330137 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
SKA2-201ENST00000330137 MRFAP1L1Q96HT8 127 aa9.94□□□□□ -0.82
SKA2-201ENST00000330137 UBXN6Q9BZV1 441 aa9.94□□□□□ -0.82
SKA2-201ENST00000330137 FILIP1Q7Z7B0 1213 aa9.94□□□□□ -0.82
SKA2-201ENST00000330137 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
SKA2-201ENST00000330137 SLC12A5Q9H2X9 1139 aa9.94□□□□□ -0.82
SKA2-201ENST00000330137 ZNF215Q9UL58 517 aaPredicted RBP9.94□□□□□ -0.82
SKA2-201ENST00000330137 ADGRL3Q9HAR2 1447 aa9.94□□□□□ -0.82
SKA2-201ENST00000330137 EVC2Q86UK5 1308 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 ADGRB3O60242 1522 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 CASQ1P31415 396 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 LMOD3Q0VAK6 560 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
SKA2-201ENST00000330137 SPC24Q8NBT2 197 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 CHAMP1Q96JM3 812 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 SLC26A8Q96RN1 970 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 SRRTQ9BXP5 876 aaKnown RBP9.93□□□□□ -0.82
SKA2-201ENST00000330137 DDX19AQ9NUU7 478 aaKnown RBP9.93□□□□□ -0.82
SKA2-201ENST00000330137 CNPY2Q9Y2B0 182 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 FHOD1Q9Y613 1164 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 KIAA0232Q92628 1395 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 CEP85Q6P2H3 762 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 GIMAP6Q6P9H5 292 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
SKA2-201ENST00000330137 ZBTB7CA1YPR0 619 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 ERICH4A6NGS2 130 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 ZRANB2O95218 330 aaKnown RBP eCLIP9.92□□□□□ -0.82
SKA2-201ENST00000330137 TYRO3Q06418 890 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 ICE2Q659A1 982 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 LRRC8AQ8IWT6 810 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 MPNDQ8N594 471 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 MRVI1Q9Y6F6 885 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
SKA2-201ENST00000330137 PDE1AP54750 535 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 FOXD4L5Q5VV16 416 aaPredicted RBP9.92□□□□□ -0.82
SKA2-201ENST00000330137 GOLGA5Q8TBA6 731 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 FOXD4L4Q8WXT5 416 aaPredicted RBP9.92□□□□□ -0.82
SKA2-201ENST00000330137 NUP62CLQ9H1M0 184 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 ZNF446Q9NWS9 450 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 C3P01024 1663 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
SKA2-201ENST00000330137 RPGRIP1LQ68CZ1 1315 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 SALL3Q9BXA9 1300 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 U2SURPO15042 1029 aaKnown RBP9.92□□□□□ -0.82
SKA2-201ENST00000330137 DHX16O60231 1041 aaKnown RBP9.92□□□□□ -0.82
SKA2-201ENST00000330137 HSPA4P34932 840 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 GSDMDP57764 484 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 C14orf93Q9H972 538 aaKnown RBP9.92□□□□□ -0.82
SKA2-201ENST00000330137 GDPD2Q9HCC8 539 aa9.92□□□□□ -0.82
SKA2-201ENST00000330137 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 PPLO60437 1756 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 CCP110O43303 1012 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 PNMA6AP0CW24 399 aaPredicted RBP9.91□□□□□ -0.82
SKA2-201ENST00000330137 SYT1P21579 422 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 NFE2L2Q16236 605 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 CCDC93Q567U6 631 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 RTF1Q92541 710 aaKnown RBP9.91□□□□□ -0.82
SKA2-201ENST00000330137 ZSCAN31Q96LW9 406 aaPredicted RBP9.91□□□□□ -0.82
SKA2-201ENST00000330137 AK7Q96M32 723 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 TRIM5Q9C035 493 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 CLIP2Q9UDT6 1046 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 TTC21BQ7Z4L5 1316 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 ADGRF5Q8IZF2 1346 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 HSPA2P54652 639 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 ELF2Q15723 593 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 MSL3Q8N5Y2 521 aaKnown RBP9.91□□□□□ -0.82
SKA2-201ENST00000330137 ZNF622Q969S3 477 aaKnown RBP eCLIP9.91□□□□□ -0.82
SKA2-201ENST00000330137 MYCBPQ99417 103 aaPredicted RBP9.91□□□□□ -0.82
SKA2-201ENST00000330137 NCAPGQ9BPX3 1015 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 SH2B1Q9NRF2 756 aaPredicted RBP9.91□□□□□ -0.82
SKA2-201ENST00000330137 IMPACTQ9P2X3 320 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 STAP2Q9UGK3 403 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 RSPH14Q9UHP6 348 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 LIMCH1Q9UPQ0 1083 aa9.91□□□□□ -0.82
SKA2-201ENST00000330137 PSDA5PKW4 1024 aaPredicted RBP9.9□□□□□ -0.82
SKA2-201ENST00000330137 IVLP07476 585 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms