RNA–Protein interactions for RNA: ENST00000330115.3

TMEM44-201, Transcript of transmembrane protein 44, humanhuman

TSL 1 (best) BASIC

Gene TMEM44, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-201ENST00000330115 ZNF790Q6PG37 636 aa21.75■■□□□ 1.07
TMEM44-201ENST00000330115 POLD1P28340 1107 aa21.74■■□□□ 1.07
TMEM44-201ENST00000330115 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
TMEM44-201ENST00000330115 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
TMEM44-201ENST00000330115 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
TMEM44-201ENST00000330115 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
TMEM44-201ENST00000330115 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
TMEM44-201ENST00000330115 ZNF784Q8NCA9 323 aaPredicted RBP21.73■■□□□ 1.07
TMEM44-201ENST00000330115 SMARCC1Q92922 1105 aaPredicted RBP21.73■■□□□ 1.07
TMEM44-201ENST00000330115 GOLGB1Q14789 3259 aaKnown RBP21.73■■□□□ 1.07
TMEM44-201ENST00000330115 MSH5O43196 834 aa21.72■■□□□ 1.07
TMEM44-201ENST00000330115 KCNQ3O43525 872 aa21.72■■□□□ 1.07
TMEM44-201ENST00000330115 EIF4A1P60842 406 aaKnown RBP21.72■■□□□ 1.07
TMEM44-201ENST00000330115 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
TMEM44-201ENST00000330115 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
TMEM44-201ENST00000330115 ASAP1Q9ULH1 1129 aa21.71■■□□□ 1.07
TMEM44-201ENST00000330115 FMNL2Q96PY5 1086 aa21.69■■□□□ 1.06
TMEM44-201ENST00000330115 CT47B1P0C2W7 299 aaPredicted RBP21.68■■□□□ 1.06
TMEM44-201ENST00000330115 GPR162Q16538 588 aa21.68■■□□□ 1.06
TMEM44-201ENST00000330115 C8orf58Q8NAV2 365 aa21.68■■□□□ 1.06
TMEM44-201ENST00000330115 SOS1Q07889 1333 aaPredicted RBP21.67■■□□□ 1.06
TMEM44-201ENST00000330115 LINC00116Q8NCU8 138 aa21.67■■□□□ 1.06
TMEM44-201ENST00000330115 ZNF496Q96IT1 587 aaPredicted RBP21.67■■□□□ 1.06
TMEM44-201ENST00000330115 HEG1Q9ULI3 1381 aa21.66■■□□□ 1.06
TMEM44-201ENST00000330115 ELL2O00472 640 aaPredicted RBP21.66■■□□□ 1.06
TMEM44-201ENST00000330115 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
TMEM44-201ENST00000330115 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
TMEM44-201ENST00000330115 PTCD1O75127 700 aaKnown RBP21.65■■□□□ 1.06
TMEM44-201ENST00000330115 YBX3P16989 372 aaKnown RBP eCLIP21.65■■□□□ 1.06
TMEM44-201ENST00000330115 ITPK1Q13572 414 aa21.65■■□□□ 1.06
TMEM44-201ENST00000330115 KRT24Q2M2I5 525 aa21.65■■□□□ 1.06
TMEM44-201ENST00000330115 TSPYL6Q8N831 410 aa21.65■■□□□ 1.06
TMEM44-201ENST00000330115 RBM42Q9BTD8 480 aaKnown RBP21.65■■□□□ 1.06
TMEM44-201ENST00000330115 CHMP4AQ9BY43 222 aa21.65■■□□□ 1.06
TMEM44-201ENST00000330115 CACNA1FO60840 1977 aa21.65■■□□□ 1.06
TMEM44-201ENST00000330115 LOC102724428A0A0B4J2F2 783 aa21.64■■□□□ 1.05
TMEM44-201ENST00000330115 VAMP4O75379 141 aa21.64■■□□□ 1.05
TMEM44-201ENST00000330115 PHF14O94880 888 aa21.64■■□□□ 1.05
TMEM44-201ENST00000330115 HOXB7P09629 217 aa21.64■■□□□ 1.05
TMEM44-201ENST00000330115 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.05
TMEM44-201ENST00000330115 SIK1P57059 783 aa21.64■■□□□ 1.05
TMEM44-201ENST00000330115 KCPQ6ZWJ8 1503 aa21.64■■□□□ 1.05
TMEM44-201ENST00000330115 GIGYF1O75420 1035 aaPredicted RBP21.63■■□□□ 1.05
TMEM44-201ENST00000330115 VSIG10Q8N0Z9 540 aa21.63■■□□□ 1.05
TMEM44-201ENST00000330115 ZNF428Q96B54 188 aa21.63■■□□□ 1.05
TMEM44-201ENST00000330115 AK7Q96M32 723 aa21.63■■□□□ 1.05
TMEM44-201ENST00000330115 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
TMEM44-201ENST00000330115 COL5A3P25940 1745 aaPredicted RBP21.62■■□□□ 1.05
TMEM44-201ENST00000330115 ZNF831Q5JPB2 1677 aa21.61■■□□□ 1.05
TMEM44-201ENST00000330115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.61■■□□□ 1.05
TMEM44-201ENST00000330115 SLC4A9Q96Q91 983 aa21.6■■□□□ 1.05
TMEM44-201ENST00000330115 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
TMEM44-201ENST00000330115 FLAD1Q8NFF5 587 aa21.59■■□□□ 1.05
TMEM44-201ENST00000330115 RCAN3Q9UKA8 241 aa21.59■■□□□ 1.05
TMEM44-201ENST00000330115 EIF2S2P20042 333 aaKnown RBP21.58■■□□□ 1.05
TMEM44-201ENST00000330115 CCDC30Q5VVM6 783 aa21.58■■□□□ 1.05
TMEM44-201ENST00000330115 ATP6V1AP38606 617 aa21.57■■□□□ 1.04
TMEM44-201ENST00000330115 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
TMEM44-201ENST00000330115 ALDH1L2Q3SY69 923 aa21.57■■□□□ 1.04
TMEM44-201ENST00000330115 USP16Q9Y5T5 823 aa21.57■■□□□ 1.04
TMEM44-201ENST00000330115 TJP1Q07157 1748 aa21.56■■□□□ 1.04
TMEM44-201ENST00000330115 KIAA1551Q9HCM1 1747 aa21.56■■□□□ 1.04
TMEM44-201ENST00000330115 PRAMEF22A3QJZ6 481 aa21.56■■□□□ 1.04
TMEM44-201ENST00000330115 GNPATO15228 680 aa21.56■■□□□ 1.04
TMEM44-201ENST00000330115 SSFA2P28290 1259 aa21.56■■□□□ 1.04
TMEM44-201ENST00000330115 HDGFL1Q5TGJ6 251 aa21.56■■□□□ 1.04
TMEM44-201ENST00000330115 CICQ96RK0 1608 aaPredicted RBP21.55■■□□□ 1.04
TMEM44-201ENST00000330115 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
TMEM44-201ENST00000330115 STARD3NLO95772 234 aa21.55■■□□□ 1.04
TMEM44-201ENST00000330115 MYH14Q7Z406 1995 aaKnown RBP21.54■■□□□ 1.04
TMEM44-201ENST00000330115 DNAJC10Q8IXB1 793 aa21.54■■□□□ 1.04
TMEM44-201ENST00000330115 NECTIN2Q92692 538 aa21.54■■□□□ 1.04
TMEM44-201ENST00000330115 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
TMEM44-201ENST00000330115 CD2APQ9Y5K6 639 aa21.54■■□□□ 1.04
TMEM44-201ENST00000330115 SSH1Q8WYL5 1049 aa21.53■■□□□ 1.04
TMEM44-201ENST00000330115 WWC3Q9ULE0 1092 aa21.53■■□□□ 1.04
TMEM44-201ENST00000330115 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
TMEM44-201ENST00000330115 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
TMEM44-201ENST00000330115 KIF13BQ9NQT8 1826 aa21.52■■□□□ 1.04
TMEM44-201ENST00000330115 CYP19A1P11511 503 aaPredicted RBP21.51■■□□□ 1.03
TMEM44-201ENST00000330115 DBF4Q9UBU7 674 aaPredicted RBP21.51■■□□□ 1.03
TMEM44-201ENST00000330115 BCAR3O75815 825 aa21.5■■□□□ 1.03
TMEM44-201ENST00000330115 SLC4A2P04920 1241 aa21.5■■□□□ 1.03
TMEM44-201ENST00000330115 BRPF1P55201 1214 aaPredicted RBP21.5■■□□□ 1.03
TMEM44-201ENST00000330115 MRPL50Q8N5N7 158 aaKnown RBP21.5■■□□□ 1.03
TMEM44-201ENST00000330115 DDX21Q9NR30 783 aaKnown RBP eCLIP21.5■■□□□ 1.03
TMEM44-201ENST00000330115 ERBB4Q15303 1308 aa21.5■■□□□ 1.03
TMEM44-201ENST00000330115 N4BP2Q86UW6 1770 aaPredicted RBP21.49■■□□□ 1.03
TMEM44-201ENST00000330115 A1BGP04217 495 aa21.49■■□□□ 1.03
TMEM44-201ENST00000330115 BCL2L13Q9BXK5 485 aa21.49■■□□□ 1.03
TMEM44-201ENST00000330115 CHPF2Q9P2E5 772 aa21.49■■□□□ 1.03
TMEM44-201ENST00000330115 GRIN3BO60391 1043 aa21.48■■□□□ 1.03
TMEM44-201ENST00000330115 C1QTNF8P60827 252 aa21.48■■□□□ 1.03
TMEM44-201ENST00000330115 HYPKQ9NX55 129 aa21.48■■□□□ 1.03
TMEM44-201ENST00000330115 SUPT16HQ9Y5B9 1047 aaKnown RBP21.47■■□□□ 1.03
TMEM44-201ENST00000330115 ATP10DQ9P241 1426 aa21.46■■□□□ 1.03
TMEM44-201ENST00000330115 PDIA6Q15084 440 aa21.46■■□□□ 1.03
TMEM44-201ENST00000330115 RC3H1Q5TC82 1133 aaKnown RBP21.46■■□□□ 1.03
TMEM44-201ENST00000330115 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
TMEM44-201ENST00000330115 CCDC87Q9NVE4 849 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms