RNA–Protein interactions for RNA: ENST00000329654.8

PDE4B-201, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best) BASIC

Gene PDE4B, Length 3,998 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-201ENST00000329654 HOXC9P31274 260 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 U2AF1Q01081 240 aaKnown RBP eCLIP6.39□□□□□ -1.39
PDE4B-201ENST00000329654 FAM161AQ3B820 660 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 NBPF14Q5TI25 921 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 IP6K1Q92551 441 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 CCDC94Q9BW85 323 aaPredicted RBP6.39□□□□□ -1.39
PDE4B-201ENST00000329654 SLFN5Q08AF3 891 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 KIAA1211Q6ZU35 1233 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 ARHGEF25Q86VW2 580 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 SEPT12Q8IYM1 358 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 TCP11L2Q8N4U5 519 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 ZNF428Q96B54 188 aa6.39□□□□□ -1.39
PDE4B-201ENST00000329654 ESPNB1AK53 854 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 KDM4AO75164 1064 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 CGNQ9P2M7 1197 aaKnown RBP6.38□□□□□ -1.39
PDE4B-201ENST00000329654 IL16Q14005 1332 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 ADAMTS7Q9UKP4 1686 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 COL16A1Q07092 1604 aaPredicted RBP6.38□□□□□ -1.39
PDE4B-201ENST00000329654 CCDC96Q2M329 555 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 VIRMAQ69YN4 1812 aaKnown RBP6.38□□□□□ -1.39
PDE4B-201ENST00000329654 GCP02774 474 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 TMPOP42166 694 aaKnown RBP6.38□□□□□ -1.39
PDE4B-201ENST00000329654 HSP90AB2PQ58FF8 381 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 DUSP27Q5VZP5 1158 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 FAM196AQ6ZSG2 479 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 TSHZ1Q6ZSZ6 1077 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 EP400NLQ6ZTU2 488 aa6.38□□□□□ -1.39
PDE4B-201ENST00000329654 ARID4AP29374 1257 aaPredicted RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 AMPHP49418 695 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 NBPF6Q5VWK0 638 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 NBPF5PQ86XG9 351 aaPredicted RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 RNF217Q8TC41 542 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 NBPF4Q96M43 638 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 SLKQ9H2G2 1235 aaPredicted RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 UPF2Q9HAU5 1272 aaKnown RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 RGS17Q9UGC6 210 aaPredicted RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 FAM98CQ17RN3 349 aaKnown RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 RINLQ6ZS11 566 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 BSDC1Q9NW68 430 aaPredicted RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 FAM13BQ9NYF5 915 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 TRIM35Q9UPQ4 493 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 CEP83Q9Y592 693 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 LOC102724159A0A0B4J2E5 919 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 BCAR3O75815 825 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 SSR1P43307 286 aaKnown RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 PWP2Q15269 919 aaKnown RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 UPF1Q92900 1129 aaKnown RBP eCLIP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 TSPYL1Q9H0U9 437 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 EFCC1Q9HA90 598 aa6.37□□□□□ -1.39
PDE4B-201ENST00000329654 RRP7AQ9Y3A4 280 aaKnown RBP6.37□□□□□ -1.39
PDE4B-201ENST00000329654 U2SURPO15042 1029 aaKnown RBP6.36□□□□□ -1.39
PDE4B-201ENST00000329654 NLRP2Q9NX02 1062 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 PKD1L3Q7Z443 1732 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 CHRNA2Q15822 529 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 NFE2L2Q16236 605 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 EXOC8Q8IYI6 725 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 SPRYD3Q8NCJ5 442 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 COG6Q9Y2V7 657 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 THRAP3Q9Y2W1 955 aaKnown RBP6.36□□□□□ -1.39
PDE4B-201ENST00000329654 PRKAR2BP31323 418 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 ZKSCAN8Q15776 578 aaPredicted RBP6.36□□□□□ -1.39
PDE4B-201ENST00000329654 MAPK8IP3Q9UPT6 1336 aa6.36□□□□□ -1.39
PDE4B-201ENST00000329654 COL14A1Q05707 1796 aaKnown RBP6.35□□□□□ -1.39
PDE4B-201ENST00000329654 EXOC5O00471 708 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 FRAT2O75474 233 aaPredicted RBP6.35□□□□□ -1.39
PDE4B-201ENST00000329654 BECN1Q14457 450 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 CLUAP1Q96AJ1 413 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 EYA1Q99502 592 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 BCL2L13Q9BXK5 485 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 SIPA1L3O60292 1781 aaPredicted RBP6.35□□□□□ -1.39
PDE4B-201ENST00000329654 PHACTR3Q96KR7 559 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 FAM83GA6ND36 823 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 DDB1Q16531 1140 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 SPINK5Q9NQ38 1064 aaPredicted RBP6.35□□□□□ -1.39
PDE4B-201ENST00000329654 PLCH1Q4KWH8 1693 aa6.35□□□□□ -1.39
PDE4B-201ENST00000329654 PANK1Q8TE04 598 aa6.34□□□□□ -1.39
PDE4B-201ENST00000329654 PARP4Q9UKK3 1724 aaKnown RBP6.34□□□□□ -1.39
PDE4B-201ENST00000329654 WNK3Q9BYP7 1800 aa6.34□□□□□ -1.39
PDE4B-201ENST00000329654 CT47A1Q5JQC4 288 aaPredicted RBP6.34□□□□□ -1.39
PDE4B-201ENST00000329654 MYCBPQ99417 103 aaPredicted RBP6.34□□□□□ -1.39
PDE4B-201ENST00000329654 OVOS2A0A0G2JMS6 1433 aa6.34□□□□□ -1.39
PDE4B-201ENST00000329654 HTATSF1O43719 755 aaKnown RBP6.34□□□□□ -1.39
PDE4B-201ENST00000329654 CT47B1P0C2W7 299 aaPredicted RBP6.34□□□□□ -1.39
PDE4B-201ENST00000329654 ZNF853P0CG23 659 aa6.34□□□□□ -1.39
PDE4B-201ENST00000329654 SULT6B1Q6IMI4 303 aa6.34□□□□□ -1.39
PDE4B-201ENST00000329654 CCDC172P0C7W6 258 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 ZNF513Q8N8E2 541 aaPredicted RBP6.33□□□□□ -1.4
PDE4B-201ENST00000329654 RBM28Q9NW13 759 aaKnown RBP6.33□□□□□ -1.4
PDE4B-201ENST00000329654 NRAPQ86VF7 1730 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 KIAA0232Q92628 1395 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 HMOX1P09601 288 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 KCNJ4P48050 445 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 BRPF1P55201 1214 aaPredicted RBP6.33□□□□□ -1.4
PDE4B-201ENST00000329654 RAPGEF4Q8WZA2 1011 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 KDM3BQ7LBC6 1761 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 ERBB3P21860 1342 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 NWD2Q9ULI1 1742 aa6.33□□□□□ -1.4
PDE4B-201ENST00000329654 PPP1R1BQ9UD71 204 aaPredicted RBP6.33□□□□□ -1.4
PDE4B-201ENST00000329654 SHANK3Q9BYB0 1731 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms