RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 DNAAF4Q8WXU2 420 aa23.96■■□□□ 1.43
CHMP6-201ENST00000325167 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
CHMP6-201ENST00000325167 UBTFL1P0CB47 393 aaPredicted RBP23.95■■□□□ 1.43
CHMP6-201ENST00000325167 RBM6P78332 1123 aaKnown RBP23.95■■□□□ 1.43
CHMP6-201ENST00000325167 ZNF790Q6PG37 636 aa23.95■■□□□ 1.43
CHMP6-201ENST00000325167 FNBP4Q8N3X1 1017 aaPredicted RBP23.95■■□□□ 1.43
CHMP6-201ENST00000325167 PHAXQ9H814 394 aaKnown RBP23.95■■□□□ 1.43
CHMP6-201ENST00000325167 ATP8B2P98198 1209 aa23.95■■□□□ 1.42
CHMP6-201ENST00000325167 ABCA3Q99758 1704 aa23.94■■□□□ 1.42
CHMP6-201ENST00000325167 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
CHMP6-201ENST00000325167 DDX58O95786 925 aaKnown RBP23.93■■□□□ 1.42
CHMP6-201ENST00000325167 TOM1L2Q6ZVM7 507 aa23.92■■□□□ 1.42
CHMP6-201ENST00000325167 PLEKHM2Q8IWE5 1019 aa23.92■■□□□ 1.42
CHMP6-201ENST00000325167 CARD10Q9BWT7 1032 aa23.92■■□□□ 1.42
CHMP6-201ENST00000325167 USP44Q9H0E7 712 aa23.92■■□□□ 1.42
CHMP6-201ENST00000325167 DDX21Q9NR30 783 aaKnown RBP eCLIP23.92■■□□□ 1.42
CHMP6-201ENST00000325167 PCDH11XQ9BZA7 1347 aa23.92■■□□□ 1.42
CHMP6-201ENST00000325167 PCDH11YQ9BZA8 1340 aa23.92■■□□□ 1.42
CHMP6-201ENST00000325167 ALDH1L1O75891 902 aa23.92■■□□□ 1.42
CHMP6-201ENST00000325167 IBTKQ9P2D0 1353 aaPredicted RBP23.91■■□□□ 1.42
CHMP6-201ENST00000325167 BEND3Q5T5X7 828 aa23.91■■□□□ 1.42
CHMP6-201ENST00000325167 TTC5Q8N0Z6 440 aa23.91■■□□□ 1.42
CHMP6-201ENST00000325167 TRPC5Q9UL62 973 aaPredicted RBP23.91■■□□□ 1.42
CHMP6-201ENST00000325167 BCL9LQ86UU0 1499 aa23.9■■□□□ 1.42
CHMP6-201ENST00000325167 PI4KAP2A4QPH2 592 aa23.9■■□□□ 1.42
CHMP6-201ENST00000325167 CYP27B1O15528 508 aa23.9■■□□□ 1.42
CHMP6-201ENST00000325167 KSR2Q6VAB6 950 aa23.9■■□□□ 1.42
CHMP6-201ENST00000325167 PI4KAP1Q8N8J0 262 aa23.9■■□□□ 1.42
CHMP6-201ENST00000325167 C22orf23Q9BZE7 217 aa23.9■■□□□ 1.42
CHMP6-201ENST00000325167 ATRNO75882 1429 aa23.89■■□□□ 1.42
CHMP6-201ENST00000325167 CDC45O75419 566 aa23.89■■□□□ 1.41
CHMP6-201ENST00000325167 TTC22Q5TAA0 569 aa23.89■■□□□ 1.41
CHMP6-201ENST00000325167 NFATC2IPQ8NCF5 419 aa23.89■■□□□ 1.41
CHMP6-201ENST00000325167 ZCRB1Q8TBF4 217 aaKnown RBP23.89■■□□□ 1.41
CHMP6-201ENST00000325167 LRRFIP2Q9Y608 721 aaKnown RBP23.89■■□□□ 1.41
CHMP6-201ENST00000325167 MFAP1P55081 439 aaKnown RBP23.88■■□□□ 1.41
CHMP6-201ENST00000325167 CABP4P57796 275 aa23.88■■□□□ 1.41
CHMP6-201ENST00000325167 ADCY9O60503 1353 aa23.88■■□□□ 1.41
CHMP6-201ENST00000325167 SNRPA1P09661 255 aaKnown RBP23.87■■□□□ 1.41
CHMP6-201ENST00000325167 UPF1Q92900 1129 aaKnown RBP eCLIP23.87■■□□□ 1.414e-9■■■■□ 23.1
CHMP6-201ENST00000325167 FMNL2Q96PY5 1086 aa23.87■■□□□ 1.41
CHMP6-201ENST00000325167 IL2RBP14784 551 aa23.86■■□□□ 1.41
CHMP6-201ENST00000325167 LRRCC1Q9C099 1032 aa23.86■■□□□ 1.41
CHMP6-201ENST00000325167 OSBPL3Q9H4L5 887 aa23.86■■□□□ 1.41
CHMP6-201ENST00000325167 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
CHMP6-201ENST00000325167 RAB11FIP3O75154 756 aa23.86■■□□□ 1.41
CHMP6-201ENST00000325167 EVA1CP58658 441 aa23.86■■□□□ 1.41
CHMP6-201ENST00000325167 SSH3Q8TE77 659 aa23.86■■□□□ 1.41
CHMP6-201ENST00000325167 NKX1-1Q15270 411 aaPredicted RBP23.85■■□□□ 1.41
CHMP6-201ENST00000325167 RBM25P49756 843 aaKnown RBP23.84■■□□□ 1.41
CHMP6-201ENST00000325167 CASC1Q6TDU7 716 aa23.84■■□□□ 1.41
CHMP6-201ENST00000325167 SLIT2O94813 1529 aa23.84■■□□□ 1.41
CHMP6-201ENST00000325167 HSP90AB4PQ58FF6 505 aa23.83■■□□□ 1.41
CHMP6-201ENST00000325167 MAP3K2Q9Y2U5 619 aa23.83■■□□□ 1.41
CHMP6-201ENST00000325167 ERBB4Q15303 1308 aa23.83■■□□□ 1.4
CHMP6-201ENST00000325167 LINS1Q8NG48 757 aa23.83■■□□□ 1.4
CHMP6-201ENST00000325167 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.82■■□□□ 1.4
CHMP6-201ENST00000325167 SLC39A6Q13433 755 aa23.82■■□□□ 1.4
CHMP6-201ENST00000325167 POLA2Q14181 598 aa23.82■■□□□ 1.4
CHMP6-201ENST00000325167 TBC1D9Q6ZT07 1266 aa23.82■■□□□ 1.4
CHMP6-201ENST00000325167 PNMA6EA0A0J9YXQ4 647 aa23.81■■□□□ 1.4
CHMP6-201ENST00000325167 GSPT1P15170 499 aaKnown RBP23.81■■□□□ 1.4
CHMP6-201ENST00000325167 LARP1Q6PKG0 1096 aaKnown RBP23.81■■□□□ 1.4
CHMP6-201ENST00000325167 UNC5CLQ8IV45 518 aa23.81■■□□□ 1.4
CHMP6-201ENST00000325167 ZNF496Q96IT1 587 aaPredicted RBP23.81■■□□□ 1.4
CHMP6-201ENST00000325167 PLCH1Q4KWH8 1693 aa23.81■■□□□ 1.4
CHMP6-201ENST00000325167 ANXA1P04083 346 aa23.8■■□□□ 1.4
CHMP6-201ENST00000325167 PDIA6Q15084 440 aa23.8■■□□□ 1.4
CHMP6-201ENST00000325167 NEXNQ0ZGT2 675 aa23.79■■□□□ 1.4
CHMP6-201ENST00000325167 MTX1Q13505 466 aa23.79■■□□□ 1.4
CHMP6-201ENST00000325167 PROSER3Q2NL68 480 aa23.79■■□□□ 1.4
CHMP6-201ENST00000325167 GJD4Q96KN9 370 aaPredicted RBP23.79■■□□□ 1.4
CHMP6-201ENST00000325167 C9orf78Q9NZ63 289 aaPredicted RBP23.79■■□□□ 1.4
CHMP6-201ENST00000325167 EXOC6BQ9Y2D4 811 aa23.79■■□□□ 1.4
CHMP6-201ENST00000325167 AOX1Q06278 1338 aa23.79■■□□□ 1.4
CHMP6-201ENST00000325167 C16orf71Q8IYS4 520 aaPredicted RBP23.79■■□□□ 1.4
CHMP6-201ENST00000325167 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
CHMP6-201ENST00000325167 APBB1O00213 710 aa23.78■■□□□ 1.4
CHMP6-201ENST00000325167 SMARCA5O60264 1052 aaPredicted RBP23.78■■□□□ 1.4
CHMP6-201ENST00000325167 PPP1R42Q7Z4L9 355 aa23.78■■□□□ 1.4
CHMP6-201ENST00000325167 C5P01031 1676 aa23.78■■□□□ 1.4
CHMP6-201ENST00000325167 UTYO14607 1347 aa23.78■■□□□ 1.4
CHMP6-201ENST00000325167 PRAMEF22A3QJZ6 481 aa23.77■■□□□ 1.4
CHMP6-201ENST00000325167 PDE1AP54750 535 aa23.77■■□□□ 1.4
CHMP6-201ENST00000325167 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
CHMP6-201ENST00000325167 GLI3P10071 1580 aa23.77■■□□□ 1.4
CHMP6-201ENST00000325167 NBPF7P0C2Y1 421 aaPredicted RBP23.76■■□□□ 1.39
CHMP6-201ENST00000325167 RIC3Q7Z5B4 369 aa23.76■■□□□ 1.39
CHMP6-201ENST00000325167 LAMB4A4D0S4 1761 aa23.76■■□□□ 1.39
CHMP6-201ENST00000325167 COL14A1Q05707 1796 aaKnown RBP23.76■■□□□ 1.39
CHMP6-201ENST00000325167 SRGAP3O43295 1099 aa23.76■■□□□ 1.39
CHMP6-201ENST00000325167 RTL5Q5HYW3 569 aaPredicted RBP23.76■■□□□ 1.39
CHMP6-201ENST00000325167 STAP2Q9UGK3 403 aa23.76■■□□□ 1.39
CHMP6-201ENST00000325167 SLC4A3P48751 1232 aa23.75■■□□□ 1.39
CHMP6-201ENST00000325167 KIF1BPQ96EK5 621 aa23.75■■□□□ 1.39
CHMP6-201ENST00000325167 SALL3Q9BXA9 1300 aa23.75■■□□□ 1.39
CHMP6-201ENST00000325167 NWD2Q9ULI1 1742 aa23.74■■□□□ 1.39
CHMP6-201ENST00000325167 GRM8O00222 908 aa23.74■■□□□ 1.39
CHMP6-201ENST00000325167 MX1P20591 662 aa23.74■■□□□ 1.39
CHMP6-201ENST00000325167 SURF6O75683 361 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms