RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 CFAP53Q96M91 514 aa28.48■■■□□ 2.15
ME3-201ENST00000323418 A0A0G2JLW4 131 aa28.47■■■□□ 2.15
ME3-201ENST00000323418 TM4SF1P30408 202 aa28.47■■■□□ 2.15
ME3-201ENST00000323418 DPEP1P16444 411 aa28.46■■■□□ 2.15
ME3-201ENST00000323418 KCNA3P22001 575 aa28.46■■■□□ 2.15
ME3-201ENST00000323418 HEG1Q9ULI3 1381 aa28.46■■■□□ 2.15
ME3-201ENST00000323418 POLRMTO00411 1230 aaKnown RBP28.45■■■□□ 2.14
ME3-201ENST00000323418 USPL1Q5W0Q7 1092 aa28.45■■■□□ 2.14
ME3-201ENST00000323418 ZNF496Q96IT1 587 aaPredicted RBP28.45■■■□□ 2.14
ME3-201ENST00000323418 ZNF790Q6PG37 636 aa28.44■■■□□ 2.14
ME3-201ENST00000323418 BCL2L12Q9HB09 334 aa28.44■■■□□ 2.14
ME3-201ENST00000323418 NARFQ9UHQ1 456 aa28.44■■■□□ 2.14
ME3-201ENST00000323418 BCORQ6W2J9 1755 aa28.43■■■□□ 2.14
ME3-201ENST00000323418 GIGYF1O75420 1035 aaPredicted RBP28.43■■■□□ 2.14
ME3-201ENST00000323418 TEFQ10587 303 aa28.43■■■□□ 2.14
ME3-201ENST00000323418 TTC5Q8N0Z6 440 aa28.42■■■□□ 2.14
ME3-201ENST00000323418 NUDCQ9Y266 331 aa28.41■■■□□ 2.14
ME3-201ENST00000323418 ANKRD31Q8N7Z5 1873 aa28.4■■■□□ 2.14
ME3-201ENST00000323418 ZPR1O75312 459 aa28.4■■■□□ 2.14
ME3-201ENST00000323418 BCS1LQ9Y276 419 aa28.4■■■□□ 2.14
ME3-201ENST00000323418 SBF1O95248 1867 aa28.39■■■□□ 2.14
ME3-201ENST00000323418 EIF5P55010 431 aaKnown RBP28.39■■■□□ 2.14
ME3-201ENST00000323418 FCHSD2O94868 740 aa28.38■■■□□ 2.13
ME3-201ENST00000323418 U2AF1L5P0DN76 240 aaPredicted RBP28.38■■■□□ 2.13
ME3-201ENST00000323418 U2AF1Q01081 240 aaKnown RBP eCLIP28.38■■■□□ 2.13
ME3-201ENST00000323418 NFIXQ14938 502 aa28.38■■■□□ 2.13
ME3-201ENST00000323418 KCNQ3O43525 872 aa28.37■■■□□ 2.13
ME3-201ENST00000323418 CANXP27824 592 aaKnown RBP28.36■■■□□ 2.13
ME3-201ENST00000323418 KDM3BQ7LBC6 1761 aa28.35■■■□□ 2.13
ME3-201ENST00000323418 STARD3NLO95772 234 aa28.35■■■□□ 2.13
ME3-201ENST00000323418 LAMB4A4D0S4 1761 aa28.34■■■□□ 2.13
ME3-201ENST00000323418 FMNL2Q96PY5 1086 aa28.34■■■□□ 2.13
ME3-201ENST00000323418 TEX13AQ9BXU3 409 aaPredicted RBP28.34■■■□□ 2.13
ME3-201ENST00000323418 CHRNA5P30532 468 aa28.33■■■□□ 2.13
ME3-201ENST00000323418 COL11A2P13942 1736 aaPredicted RBP28.32■■■□□ 2.12
ME3-201ENST00000323418 BTBD11A6QL63 1104 aa28.32■■■□□ 2.12
ME3-201ENST00000323418 GPBP1L1Q9HC44 474 aaPredicted RBP28.32■■■□□ 2.12
ME3-201ENST00000323418 PIM2Q9P1W9 311 aa28.32■■■□□ 2.12
ME3-201ENST00000323418 CARMIL3Q8ND23 1372 aa28.32■■■□□ 2.12
ME3-201ENST00000323418 MCM10Q7L590 875 aa28.31■■■□□ 2.12
ME3-201ENST00000323418 SENP3-EIF4A1A0A087X0R7 540 aa28.3■■■□□ 2.12
ME3-201ENST00000323418 IL6STP40189 918 aaPredicted RBP28.3■■■□□ 2.12
ME3-201ENST00000323418 SERPINB2P05120 415 aa28.29■■■□□ 2.12
ME3-201ENST00000323418 DCTN1Q14203 1278 aa28.29■■■□□ 2.12
ME3-201ENST00000323418 ZNF526Q8TF50 670 aaPredicted RBP28.29■■■□□ 2.12
ME3-201ENST00000323418 A0A087WZG4 1122 aa28.28■■■□□ 2.12
ME3-201ENST00000323418 HTATSF1O43719 755 aaKnown RBP28.28■■■□□ 2.12
ME3-201ENST00000323418 A1BGP04217 495 aa28.28■■■□□ 2.12
ME3-201ENST00000323418 ARHGAP27Q6ZUM4 889 aa28.28■■■□□ 2.12
ME3-201ENST00000323418 PRAMEF22A3QJZ6 481 aa28.27■■■□□ 2.12
ME3-201ENST00000323418 DALRD3Q5D0E6 543 aaKnown RBP28.27■■■□□ 2.12
ME3-201ENST00000323418 CCDC88AQ3V6T2 1871 aa28.26■■■□□ 2.11
ME3-201ENST00000323418 TBC1D9BQ66K14 1250 aa28.26■■■□□ 2.11
ME3-201ENST00000323418 PLEKHF1Q96S99 279 aa28.26■■■□□ 2.11
ME3-201ENST00000323418 USP16Q9Y5T5 823 aa28.26■■■□□ 2.11
ME3-201ENST00000323418 RTF1Q92541 710 aaKnown RBP28.25■■■□□ 2.11
ME3-201ENST00000323418 TBC1D2BQ9UPU7 963 aa28.25■■■□□ 2.11
ME3-201ENST00000323418 KIF3CO14782 793 aa28.24■■■□□ 2.11
ME3-201ENST00000323418 CAMTA2O94983 1202 aa28.23■■■□□ 2.11
ME3-201ENST00000323418 ARFGEF2Q9Y6D5 1785 aa28.23■■■□□ 2.11
ME3-201ENST00000323418 CACNA1SQ13698 1873 aa28.23■■■□□ 2.11
ME3-201ENST00000323418 BICDL1Q6ZP65 573 aa28.21■■■□□ 2.11
ME3-201ENST00000323418 PIP4K2AP48426 406 aaPredicted RBP28.2■■■□□ 2.1
ME3-201ENST00000323418 ZNF330Q9Y3S2 320 aaPredicted RBP28.2■■■□□ 2.1
ME3-201ENST00000323418 FER1L6Q2WGJ9 1857 aa28.19■■■□□ 2.1
ME3-201ENST00000323418 TIAM2Q8IVF5 1701 aa28.19■■■□□ 2.1
ME3-201ENST00000323418 SNRPA1P09661 255 aaKnown RBP28.19■■■□□ 2.1
ME3-201ENST00000323418 C9orf131Q5VYM1 1079 aa28.19■■■□□ 2.1
ME3-201ENST00000323418 TNRC6CQ9HCJ0 1690 aaKnown RBP28.17■■■□□ 2.1
ME3-201ENST00000323418 NBPF26B4DH59 902 aa28.17■■■□□ 2.1
ME3-201ENST00000323418 TAF7Q15545 349 aaPredicted RBP28.17■■■□□ 2.1
ME3-201ENST00000323418 PRR5LQ6MZQ0 368 aa28.17■■■□□ 2.1
ME3-201ENST00000323418 NBPF10Q6P3W6 841 aaKnown RBP28.17■■■□□ 2.1
ME3-201ENST00000323418 NBPF15Q8N660 670 aa28.17■■■□□ 2.1
ME3-201ENST00000323418 DZIP3Q86Y13 1208 aaKnown RBP28.16■■■□□ 2.1
ME3-201ENST00000323418 DICER1Q9UPY3 1922 aaKnown RBP28.16■■■□□ 2.1
ME3-201ENST00000323418 NFE2L2Q16236 605 aa28.15■■■□□ 2.1
ME3-201ENST00000323418 C2CD5Q86YS7 1000 aa28.15■■■□□ 2.1
ME3-201ENST00000323418 NUP98P52948 1817 aa28.14■■■□□ 2.1
ME3-201ENST00000323418 PRELPP51888 382 aa28.14■■■□□ 2.1
ME3-201ENST00000323418 MIS18AQ9NYP9 233 aa28.14■■■□□ 2.1
ME3-201ENST00000323418 CEP350Q5VT06 3117 aa28.14■■■□□ 2.1
ME3-201ENST00000323418 SLX4Q8IY92 1834 aa28.13■■■□□ 2.09
ME3-201ENST00000323418 RASSF7Q02833 373 aa28.12■■■□□ 2.09
ME3-201ENST00000323418 CCDC24Q8N4L8 307 aa28.12■■■□□ 2.09
ME3-201ENST00000323418 TTLL6Q8N841 843 aa28.12■■■□□ 2.09
ME3-201ENST00000323418 BRIP1Q9BX63 1249 aa28.12■■■□□ 2.09
ME3-201ENST00000323418 RNF181Q9P0P0 153 aa28.12■■■□□ 2.09
ME3-201ENST00000323418 H0YIN7 160 aa28.11■■■□□ 2.09
ME3-201ENST00000323418 RALBP1Q15311 655 aa28.11■■■□□ 2.09
ME3-201ENST00000323418 THUMPD2Q9BTF0 503 aaKnown RBP28.11■■■□□ 2.09
ME3-201ENST00000323418 NMRK2Q9NPI5 230 aa28.11■■■□□ 2.09
ME3-201ENST00000323418 NEFMP07197 916 aa28.09■■■□□ 2.09
ME3-201ENST00000323418 CLEC4GQ6UXB4 293 aa28.09■■■□□ 2.09
ME3-201ENST00000323418 SETDB2Q96T68 719 aa28.09■■■□□ 2.09
ME3-201ENST00000323418 RGL2O15211 777 aa28.08■■■□□ 2.09
ME3-201ENST00000323418 HSPA6P17066 643 aa28.08■■■□□ 2.09
ME3-201ENST00000323418 PDE6BP35913 854 aa28.08■■■□□ 2.09
ME3-201ENST00000323418 NPM2Q86SE8 214 aaKnown RBP28.08■■■□□ 2.09
ME3-201ENST00000323418 PDZRN3Q9UPQ7 1066 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms