RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 PCDH11YQ9BZA8 1340 aa22.61■■□□□ 1.21
SHISA3-201ENST00000319234 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
SHISA3-201ENST00000319234 IL2RBP14784 551 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 CABP4P57796 275 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 IL27Q8NEV9 243 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 DDX21Q9NR30 783 aaKnown RBP eCLIP22.59■■□□□ 1.21
SHISA3-201ENST00000319234 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 UBTFL1P0CB47 393 aaPredicted RBP22.59■■□□□ 1.21
SHISA3-201ENST00000319234 PROSER3Q2NL68 480 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 LARP1Q6PKG0 1096 aaKnown RBP22.59■■□□□ 1.21
SHISA3-201ENST00000319234 CHMP5Q9NZZ3 219 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 ADCY9O60503 1353 aa22.59■■□□□ 1.21
SHISA3-201ENST00000319234 HSCBQ8IWL3 235 aa22.58■■□□□ 1.21
SHISA3-201ENST00000319234 TTC5Q8N0Z6 440 aa22.58■■□□□ 1.21
SHISA3-201ENST00000319234 SNX21Q969T3 373 aa22.58■■□□□ 1.2
SHISA3-201ENST00000319234 LRRFIP2Q9Y608 721 aaKnown RBP22.58■■□□□ 1.2
SHISA3-201ENST00000319234 EIF5BO60841 1220 aaKnown RBP22.57■■□□□ 1.2
SHISA3-201ENST00000319234 KSR2Q6VAB6 950 aa22.57■■□□□ 1.2
SHISA3-201ENST00000319234 PLEKHM2Q8IWE5 1019 aa22.57■■□□□ 1.2
SHISA3-201ENST00000319234 ZNF496Q96IT1 587 aaPredicted RBP22.57■■□□□ 1.2
SHISA3-201ENST00000319234 PDIA6Q15084 440 aa22.56■■□□□ 1.2
SHISA3-201ENST00000319234 ROBO1Q9Y6N7 1651 aa22.56■■□□□ 1.2
SHISA3-201ENST00000319234 NKX1-1Q15270 411 aaPredicted RBP22.56■■□□□ 1.2
SHISA3-201ENST00000319234 AHDC1Q5TGY3 1603 aaPredicted RBP22.55■■□□□ 1.2
SHISA3-201ENST00000319234 LTBP4Q8N2S1 1624 aa22.55■■□□□ 1.2
SHISA3-201ENST00000319234 SNRPA1P09661 255 aaKnown RBP22.55■■□□□ 1.2
SHISA3-201ENST00000319234 FMNL2Q96PY5 1086 aa22.55■■□□□ 1.2
SHISA3-201ENST00000319234 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
SHISA3-201ENST00000319234 PNMA6EA0A0J9YXQ4 647 aa22.54■■□□□ 1.2
SHISA3-201ENST00000319234 ERVV-2B6SEH9 535 aa22.54■■□□□ 1.2
SHISA3-201ENST00000319234 DDX58O95786 925 aaKnown RBP22.54■■□□□ 1.2
SHISA3-201ENST00000319234 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
SHISA3-201ENST00000319234 ALDH1L1O75891 902 aa22.53■■□□□ 1.2
SHISA3-201ENST00000319234 SMARCA5O60264 1052 aaPredicted RBP22.52■■□□□ 1.2
SHISA3-201ENST00000319234 C5P01031 1676 aa22.52■■□□□ 1.2
SHISA3-201ENST00000319234 APBB1O00213 710 aa22.52■■□□□ 1.2
SHISA3-201ENST00000319234 BTG4Q9NY30 223 aa22.52■■□□□ 1.2
SHISA3-201ENST00000319234 BRPF3Q9ULD4 1205 aa22.51■■□□□ 1.19
SHISA3-201ENST00000319234 MCM4P33991 863 aa22.5■■□□□ 1.19
SHISA3-201ENST00000319234 NBPF7P0C2Y1 421 aaPredicted RBP22.5■■□□□ 1.19
SHISA3-201ENST00000319234 TTC22Q5TAA0 569 aa22.5■■□□□ 1.19
SHISA3-201ENST00000319234 DDX54Q8TDD1 881 aaKnown RBP22.5■■□□□ 1.19
SHISA3-201ENST00000319234 SSH3Q8TE77 659 aa22.5■■□□□ 1.19
SHISA3-201ENST00000319234 EXOC6BQ9Y2D4 811 aa22.5■■□□□ 1.19
SHISA3-201ENST00000319234 L1TD1Q5T7N2 865 aaKnown RBP22.49■■□□□ 1.19
SHISA3-201ENST00000319234 USP16Q9Y5T5 823 aa22.49■■□□□ 1.19
SHISA3-201ENST00000319234 COL22A1Q8NFW1 1626 aaPredicted RBP22.49■■□□□ 1.19
SHISA3-201ENST00000319234 COL14A1Q05707 1796 aaKnown RBP22.49■■□□□ 1.19
SHISA3-201ENST00000319234 GSPT1P15170 499 aaKnown RBP22.49■■□□□ 1.19
SHISA3-201ENST00000319234 OTUD7AQ8TE49 926 aaPredicted RBP22.49■■□□□ 1.19
SHISA3-201ENST00000319234 AIMP1Q12904 312 aaKnown RBP22.48■■□□□ 1.19
SHISA3-201ENST00000319234 POLA2Q14181 598 aa22.48■■□□□ 1.19
SHISA3-201ENST00000319234 LINS1Q8NG48 757 aa22.48■■□□□ 1.19
SHISA3-201ENST00000319234 LRRCC1Q9C099 1032 aa22.48■■□□□ 1.19
SHISA3-201ENST00000319234 CIZ1Q9ULV3 898 aaPredicted RBP22.48■■□□□ 1.19
SHISA3-201ENST00000319234 IBTKQ9P2D0 1353 aaPredicted RBP22.48■■□□□ 1.19
SHISA3-201ENST00000319234 MYL6BP14649 208 aa22.47■■□□□ 1.19
SHISA3-201ENST00000319234 DDIT3P35638 169 aa22.47■■□□□ 1.19
SHISA3-201ENST00000319234 PPP1R42Q7Z4L9 355 aa22.47■■□□□ 1.19
SHISA3-201ENST00000319234 HDAC5Q9UQL6 1122 aa22.47■■□□□ 1.19
SHISA3-201ENST00000319234 CDC45O75419 566 aa22.47■■□□□ 1.19
SHISA3-201ENST00000319234 TBC1D9Q6ZT07 1266 aa22.47■■□□□ 1.19
SHISA3-201ENST00000319234 SHANK3Q9BYB0 1731 aa22.46■■□□□ 1.19
SHISA3-201ENST00000319234 XAGE3Q8WTP9 111 aa22.46■■□□□ 1.19
SHISA3-201ENST00000319234 C9orf78Q9NZ63 289 aaPredicted RBP22.46■■□□□ 1.19
SHISA3-201ENST00000319234 LRP10Q7Z4F1 713 aa22.45■■□□□ 1.18
SHISA3-201ENST00000319234 RIC3Q7Z5B4 369 aa22.45■■□□□ 1.18
SHISA3-201ENST00000319234 OSBPL3Q9H4L5 887 aa22.45■■□□□ 1.18
SHISA3-201ENST00000319234 COPS6Q7L5N1 327 aa22.45■■□□□ 1.18
SHISA3-201ENST00000319234 SPRYD3Q8NCJ5 442 aa22.45■■□□□ 1.18
SHISA3-201ENST00000319234 GLI3P10071 1580 aa22.44■■□□□ 1.18
SHISA3-201ENST00000319234 RAB11FIP3O75154 756 aa22.44■■□□□ 1.18
SHISA3-201ENST00000319234 DDX11L8A8MPP1 907 aa22.43■■□□□ 1.18
SHISA3-201ENST00000319234 SRGAP3O43295 1099 aa22.43■■□□□ 1.18
SHISA3-201ENST00000319234 CWF19L2Q2TBE0 894 aaKnown RBP22.43■■□□□ 1.18
SHISA3-201ENST00000319234 KIF2CQ99661 725 aa22.43■■□□□ 1.18
SHISA3-201ENST00000319234 UTYO14607 1347 aa22.43■■□□□ 1.18
SHISA3-201ENST00000319234 ERBB4Q15303 1308 aa22.43■■□□□ 1.18
SHISA3-201ENST00000319234 NEXNQ0ZGT2 675 aa22.42■■□□□ 1.18
SHISA3-201ENST00000319234 MTX1Q13505 466 aa22.42■■□□□ 1.18
SHISA3-201ENST00000319234 COL16A1Q07092 1604 aaPredicted RBP22.42■■□□□ 1.18
SHISA3-201ENST00000319234 PDE1AP54750 535 aa22.41■■□□□ 1.18
SHISA3-201ENST00000319234 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
SHISA3-201ENST00000319234 METTL22Q9BUU2 404 aaPredicted RBP22.41■■□□□ 1.18
SHISA3-201ENST00000319234 DISP2A7MBM2 1401 aa22.41■■□□□ 1.18
SHISA3-201ENST00000319234 GRM8O00222 908 aa22.41■■□□□ 1.18
SHISA3-201ENST00000319234 SURF6O75683 361 aaKnown RBP22.41■■□□□ 1.18
SHISA3-201ENST00000319234 SALL3Q9BXA9 1300 aa22.41■■□□□ 1.18
SHISA3-201ENST00000319234 LAMB4A4D0S4 1761 aa22.41■■□□□ 1.18
SHISA3-201ENST00000319234 IGKV5-2P06315 115 aa22.4■■□□□ 1.18
SHISA3-201ENST00000319234 KCPQ6ZWJ8 1503 aa22.4■■□□□ 1.18
SHISA3-201ENST00000319234 PAPPAQ13219 1627 aa22.4■■□□□ 1.18
SHISA3-201ENST00000319234 UBR2Q8IWV8 1755 aa22.4■■□□□ 1.18
SHISA3-201ENST00000319234 SDSP20132 328 aa22.39■■□□□ 1.17
SHISA3-201ENST00000319234 TNS2Q63HR2 1409 aa22.39■■□□□ 1.17
SHISA3-201ENST00000319234 NEURL1BA8MQ27 555 aa22.38■■□□□ 1.17
SHISA3-201ENST00000319234 PIP4K2AP48426 406 aaPredicted RBP22.38■■□□□ 1.17
SHISA3-201ENST00000319234 HSP90AB4PQ58FF6 505 aa22.38■■□□□ 1.17
SHISA3-201ENST00000319234 TMOD3Q9NYL9 352 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms