RNA–Protein interactions for RNA: ENST00000318978.5

CTXN1-201, Transcript of cortexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTXN1, Length 1,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTXN1-201ENST00000318978 THUMPD2Q9BTF0 503 aaKnown RBP33.56■■■□□ 2.96
CTXN1-201ENST00000318978 SOS1Q07889 1333 aaPredicted RBP33.55■■■□□ 2.96
CTXN1-201ENST00000318978 MMP10P09238 476 aa33.55■■■□□ 2.96
CTXN1-201ENST00000318978 GYS1P13807 737 aa33.55■■■□□ 2.96
CTXN1-201ENST00000318978 RUNDC1Q96C34 613 aa33.55■■■□□ 2.96
CTXN1-201ENST00000318978 MIS18AQ9NYP9 233 aa33.55■■■□□ 2.96
CTXN1-201ENST00000318978 ANP32CO43423 234 aa33.54■■■□□ 2.96
CTXN1-201ENST00000318978 ZPR1O75312 459 aa33.54■■■□□ 2.96
CTXN1-201ENST00000318978 TMPOP42166 694 aaKnown RBP33.54■■■□□ 2.96
CTXN1-201ENST00000318978 SRP68Q9UHB9 627 aaKnown RBP33.54■■■□□ 2.96
CTXN1-201ENST00000318978 NEUROD2Q15784 382 aa33.53■■■□□ 2.96
CTXN1-201ENST00000318978 PNISRQ8TF01 805 aaKnown RBP33.53■■■□□ 2.96
CTXN1-201ENST00000318978 RRP7AQ9Y3A4 280 aaKnown RBP33.53■■■□□ 2.96
CTXN1-201ENST00000318978 USP42Q9H9J4 1324 aaKnown RBP33.53■■■□□ 2.96
CTXN1-201ENST00000318978 COL15A1P39059 1388 aa33.52■■■□□ 2.96
CTXN1-201ENST00000318978 LMOD3Q0VAK6 560 aa33.52■■■□□ 2.96
CTXN1-201ENST00000318978 NLGN2Q8NFZ4 835 aa33.52■■■□□ 2.96
CTXN1-201ENST00000318978 ZNF330Q9Y3S2 320 aaPredicted RBP33.51■■■□□ 2.95
CTXN1-201ENST00000318978 SNRPA1P09661 255 aaKnown RBP33.49■■■□□ 2.95
CTXN1-201ENST00000318978 PELP1Q8IZL8 1130 aaKnown RBP33.49■■■□□ 2.95
CTXN1-201ENST00000318978 CD2APQ9Y5K6 639 aa33.49■■■□□ 2.95
CTXN1-201ENST00000318978 KDM3BQ7LBC6 1761 aa33.49■■■□□ 2.95
CTXN1-201ENST00000318978 USPL1Q5W0Q7 1092 aa33.48■■■□□ 2.95
CTXN1-201ENST00000318978 NPM2Q86SE8 214 aaKnown RBP33.48■■■□□ 2.95
CTXN1-201ENST00000318978 PARP3Q9Y6F1 533 aa33.47■■■□□ 2.95
CTXN1-201ENST00000318978 PRAMEF22A3QJZ6 481 aa33.46■■■□□ 2.95
CTXN1-201ENST00000318978 A1BGP04217 495 aa33.46■■■□□ 2.95
CTXN1-201ENST00000318978 FKBP8Q14318 412 aa33.46■■■□□ 2.95
CTXN1-201ENST00000318978 GPR162Q16538 588 aa33.46■■■□□ 2.95
CTXN1-201ENST00000318978 USP16Q9Y5T5 823 aa33.46■■■□□ 2.95
CTXN1-201ENST00000318978 NARFQ9UHQ1 456 aa33.45■■■□□ 2.95
CTXN1-201ENST00000318978 A0A087WZG4 1122 aa33.44■■■□□ 2.94
CTXN1-201ENST00000318978 EIF5P55010 431 aaKnown RBP33.43■■■□□ 2.94
CTXN1-201ENST00000318978 TSPYL4Q9UJ04 414 aa33.42■■■□□ 2.94
CTXN1-201ENST00000318978 IL6STP40189 918 aaPredicted RBP33.41■■■□□ 2.94
CTXN1-201ENST00000318978 CCDC184Q52MB2 194 aa33.41■■■□□ 2.94
CTXN1-201ENST00000318978 LAMB4A4D0S4 1761 aa33.39■■■□□ 2.94
CTXN1-201ENST00000318978 PIP4K2AP48426 406 aaPredicted RBP33.39■■■□□ 2.94
CTXN1-201ENST00000318978 TBC1D2BQ9UPU7 963 aa33.38■■■□□ 2.93
CTXN1-201ENST00000318978 EIF4A1P60842 406 aaKnown RBP33.37■■■□□ 2.93
CTXN1-201ENST00000318978 MRS2Q9HD23 443 aa33.37■■■□□ 2.93
CTXN1-201ENST00000318978 TRIM35Q9UPQ4 493 aa33.36■■■□□ 2.93
CTXN1-201ENST00000318978 LAS1LQ9Y4W2 734 aaKnown RBP33.36■■■□□ 2.93
CTXN1-201ENST00000318978 KIF13BQ9NQT8 1826 aa33.35■■■□□ 2.93
CTXN1-201ENST00000318978 APAF1O14727 1248 aa33.34■■■□□ 2.93
CTXN1-201ENST00000318978 GIGYF1O75420 1035 aaPredicted RBP33.34■■■□□ 2.93
CTXN1-201ENST00000318978 DDR1Q08345 913 aa33.34■■■□□ 2.93
CTXN1-201ENST00000318978 TM4SF1P30408 202 aa33.33■■■□□ 2.93
CTXN1-201ENST00000318978 BCL2L12Q9HB09 334 aa33.33■■■□□ 2.93
CTXN1-201ENST00000318978 SCN7AQ01118 1682 aa33.33■■■□□ 2.93
CTXN1-201ENST00000318978 BICDL1Q6ZP65 573 aa33.32■■■□□ 2.92
CTXN1-201ENST00000318978 DZIP3Q86Y13 1208 aaKnown RBP33.32■■■□□ 2.92
CTXN1-201ENST00000318978 BABAM1Q9NWV8 329 aa33.32■■■□□ 2.92
CTXN1-201ENST00000318978 WWC3Q9ULE0 1092 aa33.32■■■□□ 2.92
CTXN1-201ENST00000318978 N4BP2Q86UW6 1770 aaPredicted RBP33.32■■■□□ 2.92
CTXN1-201ENST00000318978 C10orf71Q711Q0 1435 aa33.31■■■□□ 2.92
CTXN1-201ENST00000318978 POLRMTO00411 1230 aaKnown RBP33.31■■■□□ 2.92
CTXN1-201ENST00000318978 NFIXQ14938 502 aa33.31■■■□□ 2.92
CTXN1-201ENST00000318978 YY1P25490 414 aa33.3■■■□□ 2.92
CTXN1-201ENST00000318978 AFDNP55196 1824 aaKnown RBP33.29■■■□□ 2.92
CTXN1-201ENST00000318978 CHD4Q14839 1912 aa33.29■■■□□ 2.92
CTXN1-201ENST00000318978 NBPF26B4DH59 902 aa33.28■■■□□ 2.92
CTXN1-201ENST00000318978 YBX3P16989 372 aaKnown RBP eCLIP33.28■■■□□ 2.92
CTXN1-201ENST00000318978 TGFB2P61812 414 aa33.28■■■□□ 2.92
CTXN1-201ENST00000318978 NBPF10Q6P3W6 841 aaKnown RBP33.28■■■□□ 2.92
CTXN1-201ENST00000318978 NBPF15Q8N660 670 aa33.28■■■□□ 2.92
CTXN1-201ENST00000318978 BCORQ6W2J9 1755 aa33.27■■■□□ 2.92
CTXN1-201ENST00000318978 PXDNLA1KZ92 1463 aa33.25■■■□□ 2.91
CTXN1-201ENST00000318978 A0A0G2JLW4 131 aa33.25■■■□□ 2.91
CTXN1-201ENST00000318978 GRIN3BO60391 1043 aa33.25■■■□□ 2.91
CTXN1-201ENST00000318978 CAMTA2O94983 1202 aa33.25■■■□□ 2.91
CTXN1-201ENST00000318978 SERPINB2P05120 415 aa33.25■■■□□ 2.91
CTXN1-201ENST00000318978 TBC1D9BQ66K14 1250 aa33.25■■■□□ 2.91
CTXN1-201ENST00000318978 NGEFQ8N5V2 710 aa33.25■■■□□ 2.91
CTXN1-201ENST00000318978 KIAA1551Q9HCM1 1747 aa33.24■■■□□ 2.91
CTXN1-201ENST00000318978 CHL1O00533 1208 aa33.23■■■□□ 2.91
CTXN1-201ENST00000318978 MYL6BP14649 208 aa33.22■■■□□ 2.91
CTXN1-201ENST00000318978 EIF2S2P20042 333 aaKnown RBP33.22■■■□□ 2.91
CTXN1-201ENST00000318978 DPEP1P16444 411 aa33.21■■■□□ 2.91
CTXN1-201ENST00000318978 CALD1Q05682 793 aaKnown RBP33.21■■■□□ 2.91
CTXN1-201ENST00000318978 ZNF652Q9Y2D9 606 aa33.21■■■□□ 2.91
CTXN1-201ENST00000318978 GOLGB1Q14789 3259 aaKnown RBP33.2■■■□□ 2.91
CTXN1-201ENST00000318978 NRXN2Q9P2S2 1712 aa33.2■■■□□ 2.91
CTXN1-201ENST00000318978 SENP3-EIF4A1A0A087X0R7 540 aa33.2■■■□□ 2.91
CTXN1-201ENST00000318978 SETDB2Q96T68 719 aa33.2■■■□□ 2.91
CTXN1-201ENST00000318978 UTRNP46939 3433 aa33.2■■■□□ 2.91
CTXN1-201ENST00000318978 CFAP44Q96MT7 982 aa33.19■■■□□ 2.9
CTXN1-201ENST00000318978 NPHP1O15259 732 aa33.18■■■□□ 2.9
CTXN1-201ENST00000318978 CARMIL3Q8ND23 1372 aa33.18■■■□□ 2.9
CTXN1-201ENST00000318978 CLEC4GQ6UXB4 293 aa33.16■■■□□ 2.9
CTXN1-201ENST00000318978 KIF6Q6ZMV9 814 aa33.16■■■□□ 2.9
CTXN1-201ENST00000318978 NECTIN2Q92692 538 aa33.16■■■□□ 2.9
CTXN1-201ENST00000318978 BCS1LQ9Y276 419 aa33.16■■■□□ 2.9
CTXN1-201ENST00000318978 ERBB4Q15303 1308 aa33.15■■■□□ 2.9
CTXN1-201ENST00000318978 KRT24Q2M2I5 525 aa33.15■■■□□ 2.9
CTXN1-201ENST00000318978 BRCA1P38398 1863 aaKnown RBP33.14■■■□□ 2.9
CTXN1-201ENST00000318978 CHRNA5P30532 468 aa33.13■■■□□ 2.89
CTXN1-201ENST00000318978 GNAI1P63096 354 aa33.13■■■□□ 2.89
CTXN1-201ENST00000318978 FAM9BQ8IZU0 186 aa33.13■■■□□ 2.89
CTXN1-201ENST00000318978 MBIPQ9NS73 344 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms