RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
RPGR-201ENST00000318842 WASLO00401 505 aaPredicted RBP11.58□□□□□ -0.56
RPGR-201ENST00000318842 GJB2P29033 226 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 EDC3Q96F86 508 aaKnown RBP11.58□□□□□ -0.56
RPGR-201ENST00000318842 KCNQ3O43525 872 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 CUL4AQ13619 759 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 PPP1R42Q7Z4L9 355 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 CCDC94Q9BW85 323 aaPredicted RBP11.58□□□□□ -0.56
RPGR-201ENST00000318842 PIK3C2BO00750 1634 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 ABCA9Q8IUA7 1624 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 STX6O43752 255 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 C14orf37Q86TY3 774 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 PIBF1Q8WXW3 757 aa11.58□□□□□ -0.56
RPGR-201ENST00000318842 JAKMIP1Q96N16 626 aaKnown RBP11.58□□□□□ -0.56
RPGR-201ENST00000318842 HMMRO75330 724 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 DRC7Q8IY82 874 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 KLHDC4Q8TBB5 520 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 FTOQ9C0B1 505 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPGR-201ENST00000318842 CHMP4BQ9H444 224 aaKnown RBP11.57□□□□□ -0.56
RPGR-201ENST00000318842 SRGAP3O43295 1099 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 HS1BP3Q53T59 392 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 CDC37L1Q7L3B6 337 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
RPGR-201ENST00000318842 USP44Q9H0E7 712 aa11.57□□□□□ -0.56
RPGR-201ENST00000318842 ZSCAN22P10073 491 aaPredicted RBP11.56□□□□□ -0.56
RPGR-201ENST00000318842 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
RPGR-201ENST00000318842 PTPN21Q16825 1174 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 ST7Q9NRC1 585 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 SMC3Q9UQE7 1217 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 KDM4AO75164 1064 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 MCCP23508 829 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 SLC26A8Q96RN1 970 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 SIL1Q9H173 461 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 SALL3Q9BXA9 1300 aa11.56□□□□□ -0.56
RPGR-201ENST00000318842 LMOD3Q0VAK6 560 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 CCDC183Q5T5S1 534 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 KIF3AQ9Y496 699 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 CCDC186Q7Z3E2 898 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 STK31Q9BXU1 1019 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 WDR33Q9C0J8 1336 aaKnown RBP11.55□□□□□ -0.56
RPGR-201ENST00000318842 USP27XA6NNY8 438 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 F13A1P00488 732 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 TRERF1Q96PN7 1200 aa11.55□□□□□ -0.56
RPGR-201ENST00000318842 ACEP12821 1306 aa11.54□□□□□ -0.56
RPGR-201ENST00000318842 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
RPGR-201ENST00000318842 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
RPGR-201ENST00000318842 ME3Q16798 604 aa11.54□□□□□ -0.56
RPGR-201ENST00000318842 TTC6Q86TZ1 520 aa11.54□□□□□ -0.56
RPGR-201ENST00000318842 PDCL2Q8N4E4 241 aa11.54□□□□□ -0.56
RPGR-201ENST00000318842 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
RPGR-201ENST00000318842 EYA1Q99502 592 aa11.54□□□□□ -0.56
RPGR-201ENST00000318842 TRMT1Q9NXH9 659 aaKnown RBP11.54□□□□□ -0.56
RPGR-201ENST00000318842 ZFYVE9O95405 1425 aa11.54□□□□□ -0.56
RPGR-201ENST00000318842 HSPA4P34932 840 aa11.53□□□□□ -0.56
RPGR-201ENST00000318842 SYAP1Q96A49 352 aaPredicted RBP11.53□□□□□ -0.56
RPGR-201ENST00000318842 TLR7Q9NYK1 1049 aaKnown RBP11.53□□□□□ -0.56
RPGR-201ENST00000318842 PI4K2BQ8TCG2 481 aa11.53□□□□□ -0.56
RPGR-201ENST00000318842 CCDC8Q9H0W5 538 aaPredicted RBP11.53□□□□□ -0.56
RPGR-201ENST00000318842 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
RPGR-201ENST00000318842 UHRF1BP1LA0JNW5 1464 aa11.53□□□□□ -0.56
RPGR-201ENST00000318842 KCNJ4P48050 445 aa11.53□□□□□ -0.56
RPGR-201ENST00000318842 TAF7Q15545 349 aaPredicted RBP11.53□□□□□ -0.56
RPGR-201ENST00000318842 LSG1Q9H089 658 aaKnown RBP11.53□□□□□ -0.56
RPGR-201ENST00000318842 TPCN1Q9ULQ1 816 aa11.53□□□□□ -0.56
RPGR-201ENST00000318842 MTMR6Q9Y217 621 aa11.53□□□□□ -0.56
RPGR-201ENST00000318842 VGLL3A8MV65 326 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 JAK2O60674 1132 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 ATP8B2P98198 1209 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 CCDC144BQ3MJ40 725 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 CCDC144CPQ8IYA2 1237 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 DNAJC25Q9H1X3 360 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 DACT1Q9NYF0 836 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 USP16Q9Y5T5 823 aa11.52□□□□□ -0.56
RPGR-201ENST00000318842 AMPHP49418 695 aa11.52□□□□□ -0.57
RPGR-201ENST00000318842 DMTNQ08495 405 aa11.52□□□□□ -0.57
RPGR-201ENST00000318842 CWF19L2Q2TBE0 894 aaKnown RBP11.52□□□□□ -0.57
RPGR-201ENST00000318842 ALKQ9UM73 1620 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 SMAP1Q8IYB5 467 aaPredicted RBP11.51□□□□□ -0.57
RPGR-201ENST00000318842 KIAA1524Q8TCG1 905 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 TTC14Q96N46 770 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 PUS7Q96PZ0 661 aaKnown RBP11.51□□□□□ -0.57
RPGR-201ENST00000318842 CRB1P82279 1406 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 SGSM2O43147 1006 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 IL17REQ8NFR9 667 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 OSBPL3Q9H4L5 887 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 LGR6Q9HBX8 967 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 CHPF2Q9P2E5 772 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 PTPRCP08575 1304 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 HECW2Q9P2P5 1572 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
RPGR-201ENST00000318842 PI4KAP2A4QPH2 592 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms