RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MYH3P11055 1940 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 USP42Q9H9J4 1324 aaKnown RBP9.03□□□□□ -0.96
NPHP1-201ENST00000316534 ALDH1L1O75891 902 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 IL17RAQ96F46 866 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 MEIS3Q99687 375 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 DDX21Q9NR30 783 aaKnown RBP eCLIP9.03□□□□□ -0.96
NPHP1-201ENST00000316534 NUP98P52948 1817 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 COL24A1Q17RW2 1714 aa9.03□□□□□ -0.96
NPHP1-201ENST00000316534 ATP8B2P98198 1209 aa9.02□□□□□ -0.96
NPHP1-201ENST00000316534 SSH3Q8TE77 659 aa9.02□□□□□ -0.96
NPHP1-201ENST00000316534 STK31Q9BXU1 1019 aa9.02□□□□□ -0.96
NPHP1-201ENST00000316534 HYPKQ9NX55 129 aa9.02□□□□□ -0.96
NPHP1-201ENST00000316534 THRAP3Q9Y2W1 955 aaKnown RBP9.02□□□□□ -0.96
NPHP1-201ENST00000316534 TAF1LQ8IZX4 1826 aa9.02□□□□□ -0.96
NPHP1-201ENST00000316534 HDGFL1Q5TGJ6 251 aa9.02□□□□□ -0.97
NPHP1-201ENST00000316534 IPO9Q96P70 1041 aaKnown RBP9.02□□□□□ -0.97
NPHP1-201ENST00000316534 AOX1Q06278 1338 aa9.02□□□□□ -0.97
NPHP1-201ENST00000316534 GNAI3P08754 354 aa9.02□□□□□ -0.97
NPHP1-201ENST00000316534 IL2RBP14784 551 aa9.02□□□□□ -0.97
NPHP1-201ENST00000316534 DDX60Q8IY21 1712 aaKnown RBP9.02□□□□□ -0.97
NPHP1-201ENST00000316534 SPEF2Q9C093 1822 aa9.02□□□□□ -0.97
NPHP1-201ENST00000316534 TEFQ10587 303 aa9.01□□□□□ -0.97
NPHP1-201ENST00000316534 CHRNA2Q15822 529 aa9.01□□□□□ -0.97
NPHP1-201ENST00000316534 CHPF2Q9P2E5 772 aa9.01□□□□□ -0.97
NPHP1-201ENST00000316534 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
NPHP1-201ENST00000316534 ZCRB1Q8TBF4 217 aaKnown RBP9.01□□□□□ -0.97
NPHP1-201ENST00000316534 PHAXQ9H814 394 aaKnown RBP9.01□□□□□ -0.97
NPHP1-201ENST00000316534 NOP58Q9Y2X3 529 aaKnown RBP9.01□□□□□ -0.97
NPHP1-201ENST00000316534 KSR2Q6VAB6 950 aa9□□□□□ -0.97
NPHP1-201ENST00000316534 STAP2Q9UGK3 403 aa9□□□□□ -0.97
NPHP1-201ENST00000316534 GNAI2P04899 355 aa9□□□□□ -0.97
NPHP1-201ENST00000316534 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
NPHP1-201ENST00000316534 BCL9LQ86UU0 1499 aa9□□□□□ -0.97
NPHP1-201ENST00000316534 LARP1Q6PKG0 1096 aaKnown RBP9□□□□□ -0.97
NPHP1-201ENST00000316534 PLEKHM2Q8IWE5 1019 aa9□□□□□ -0.97
NPHP1-201ENST00000316534 TBC1D32Q96NH3 1257 aa9□□□□□ -0.97
NPHP1-201ENST00000316534 BARGINQ6ZT62 677 aa8.99□□□□□ -0.97
NPHP1-201ENST00000316534 PRDM11Q9NQV5 511 aa8.99□□□□□ -0.97
NPHP1-201ENST00000316534 DNAAF4Q8WXU2 420 aa8.99□□□□□ -0.97
NPHP1-201ENST00000316534 SPATA31A1Q5TZJ5 1347 aa8.99□□□□□ -0.97
NPHP1-201ENST00000316534 CASP7P55210 303 aa8.99□□□□□ -0.97
NPHP1-201ENST00000316534 CDCA7Q9BWT1 371 aaPredicted RBP8.99□□□□□ -0.97
NPHP1-201ENST00000316534 F6X3S4 739 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 SEC24BO95487 1268 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 SNRPA1P09661 255 aaKnown RBP8.98□□□□□ -0.97
NPHP1-201ENST00000316534 RBM25P49756 843 aaKnown RBP8.98□□□□□ -0.97
NPHP1-201ENST00000316534 PROSER3Q2NL68 480 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 NFATC2IPQ8NCF5 419 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 BTAF1O14981 1849 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 PRAMEF22A3QJZ6 481 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 ZNF496Q96IT1 587 aaPredicted RBP8.98□□□□□ -0.97
NPHP1-201ENST00000316534 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 FMNL2Q96PY5 1086 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 C1orf115Q9H7X2 142 aa8.98□□□□□ -0.97
NPHP1-201ENST00000316534 RGPD3A6NKT7 1758 aaPredicted RBP8.97□□□□□ -0.97
NPHP1-201ENST00000316534 RGPD4Q7Z3J3 1758 aa8.97□□□□□ -0.97
NPHP1-201ENST00000316534 GSPT1P15170 499 aaKnown RBP8.97□□□□□ -0.97
NPHP1-201ENST00000316534 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
NPHP1-201ENST00000316534 SPATA31A5Q5VU36 1347 aa8.97□□□□□ -0.97
NPHP1-201ENST00000316534 SPATA31A7Q8IWB4 1347 aa8.97□□□□□ -0.97
NPHP1-201ENST00000316534 LINS1Q8NG48 757 aa8.97□□□□□ -0.97
NPHP1-201ENST00000316534 SRCIN1Q9C0H9 1055 aa8.97□□□□□ -0.97
NPHP1-201ENST00000316534 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
NPHP1-201ENST00000316534 TTC22Q5TAA0 569 aa8.97□□□□□ -0.97
NPHP1-201ENST00000316534 RAB11FIP3O75154 756 aa8.96□□□□□ -0.97
NPHP1-201ENST00000316534 IGKV5-2P06315 115 aa8.96□□□□□ -0.97
NPHP1-201ENST00000316534 RABL6Q3YEC7 729 aaPredicted RBP8.96□□□□□ -0.97
NPHP1-201ENST00000316534 EPB41L2O43491 1005 aaKnown RBP8.96□□□□□ -0.98
NPHP1-201ENST00000316534 METTL22Q9BUU2 404 aaPredicted RBP8.96□□□□□ -0.98
NPHP1-201ENST00000316534 HMMRO75330 724 aa8.96□□□□□ -0.98
NPHP1-201ENST00000316534 C4AP0C0L4 1744 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 C4BP0C0L5 1744 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 PNMA6EA0A0J9YXQ4 647 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 PI4KAP2A4QPH2 592 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 RGS3P49796 1198 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 PI4KAP1Q8N8J0 262 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 MYH14Q7Z406 1995 aaKnown RBP8.95□□□□□ -0.98
NPHP1-201ENST00000316534 TOM1L2Q6ZVM7 507 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 NBPF14Q5TI25 921 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
NPHP1-201ENST00000316534 NBPF15Q8N660 670 aa8.95□□□□□ -0.98
NPHP1-201ENST00000316534 JCADQ9P266 1359 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 BTG4Q9NY30 223 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 DOCK2Q92608 1830 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 NEURL1BA8MQ27 555 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 RGL2O15211 777 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 EIF5BO60841 1220 aaKnown RBP8.94□□□□□ -0.98
NPHP1-201ENST00000316534 MAP3K2Q9Y2U5 619 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 ANP32AP39687 249 aaKnown RBP8.94□□□□□ -0.98
NPHP1-201ENST00000316534 CABP4P57796 275 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
NPHP1-201ENST00000316534 FNBP4Q8N3X1 1017 aaPredicted RBP8.94□□□□□ -0.98
NPHP1-201ENST00000316534 PLBD2Q8NHP8 589 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 KIF2CQ99661 725 aa8.94□□□□□ -0.98
NPHP1-201ENST00000316534 LRRFIP2Q9Y608 721 aaKnown RBP8.94□□□□□ -0.98
NPHP1-201ENST00000316534 NBPF7P0C2Y1 421 aaPredicted RBP8.93□□□□□ -0.98
NPHP1-201ENST00000316534 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 RFX5P48382 616 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms