RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 UHRF1BP1LA0JNW5 1464 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 FGFR1OPO95684 399 aaKnown RBP8.44□□□□□ -1.06
SOX6-201ENST00000316399 ARHGAP29Q52LW3 1261 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 FLT4P35916 1363 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 UBXN4Q92575 508 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 RBM27Q9P2N5 1060 aaKnown RBP8.44□□□□□ -1.06
SOX6-201ENST00000316399 PPP1R12BO60237 982 aaPredicted RBP8.44□□□□□ -1.06
SOX6-201ENST00000316399 KIAA0754O94854 1291 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 FLIIQ13045 1269 aa8.44□□□□□ -1.06
SOX6-201ENST00000316399 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 ZRSR2Q15696 482 aaKnown RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 RAB34Q9BZG1 259 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 GOLIM4O00461 696 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 ZFYP08048 801 aaPredicted RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 H0YHG0 523 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 RBM25P49756 843 aaKnown RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 CCDC148Q8NFR7 591 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 TULP1O00294 542 aaPredicted RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 VPS36Q86VN1 386 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 CCDC12Q8WUD4 166 aaPredicted RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 CABP4P57796 275 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 FOXD4L6Q3SYB3 417 aaPredicted RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 FOXD4L3Q6VB84 417 aaPredicted RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 ZNF397Q8NF99 534 aaPredicted RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 SPAG1Q07617 926 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 TMCO3Q6UWJ1 677 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 ARID3AQ99856 593 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 LRRC27Q9C0I9 530 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 SYCE3A1L190 88 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 NAP1L1P55209 391 aaKnown RBP8.43□□□□□ -1.06
SOX6-201ENST00000316399 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
SOX6-201ENST00000316399 SYNMO15061 1565 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 ESCO1Q5FWF5 840 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 FAM200AQ8TCP9 573 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 PBRM1Q86U86 1689 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 ADGRF5Q8IZF2 1346 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 MYO1BO43795 1136 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 AIDAQ96BJ3 306 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 FAM114A1Q8IWE2 563 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 MYOM2P54296 1465 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 NPHP3Q7Z494 1330 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
SOX6-201ENST00000316399 STX6O43752 255 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 PTPN14Q15678 1187 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 ANKRD44Q8N8A2 993 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 TESK2Q96S53 571 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 KDM5AP29375 1690 aaKnown RBP8.42□□□□□ -1.06
SOX6-201ENST00000316399 SOGA3Q5TF21 947 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 CNNM1Q9NRU3 951 aa8.42□□□□□ -1.06
SOX6-201ENST00000316399 AIMP1Q12904 312 aaKnown RBP8.42□□□□□ -1.06
SOX6-201ENST00000316399 RRP12Q5JTH9 1297 aaKnown RBP8.41□□□□□ -1.06
SOX6-201ENST00000316399 PROSER2Q86WR7 435 aaPredicted RBP8.41□□□□□ -1.06
SOX6-201ENST00000316399 EIF4G3O43432 1585 aaKnown RBP8.41□□□□□ -1.06
SOX6-201ENST00000316399 DISP1Q96F81 1524 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 STARD3NLO95772 234 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 NPATQ14207 1427 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 LRSAM1Q6UWE0 723 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 KIF5CO60282 957 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 SYCP1Q15431 976 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 CTAGE1Q96RT6 745 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 RTL1A6NKG5 1358 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 NEO1Q92859 1461 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 ODF2Q5BJF6 829 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 MSH6P52701 1360 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 DDX12PQ92771 950 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 MBIPQ9NS73 344 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 ZNF652Q9Y2D9 606 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 IGHMBP2P38935 993 aaKnown RBP8.41□□□□□ -1.06
SOX6-201ENST00000316399 HSP90AB2PQ58FF8 381 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 CCDC181Q5TID7 509 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 USP25Q9UHP3 1055 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 TNRQ92752 1358 aa8.41□□□□□ -1.06
SOX6-201ENST00000316399 BAG4O95429 457 aaKnown RBP8.4□□□□□ -1.06
SOX6-201ENST00000316399 NECTIN2Q92692 538 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 MPHOSPH8Q99549 860 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 CALCOCO1Q9P1Z2 691 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 PRPF40BQ6NWY9 871 aaKnown RBP8.4□□□□□ -1.06
SOX6-201ENST00000316399 SLF2Q8IX21 1173 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 ABCC1P33527 1531 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 TTC37Q6PGP7 1564 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 CWC27Q6UX04 472 aaKnown RBP8.4□□□□□ -1.06
SOX6-201ENST00000316399 CLIP2Q9UDT6 1046 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 KIAA0232Q92628 1395 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 KCNG4Q8TDN1 519 aa8.4□□□□□ -1.06
SOX6-201ENST00000316399 SPATA31E1Q6ZUB1 1445 aa8.4□□□□□ -1.07
SOX6-201ENST00000316399 POLR3GO15318 223 aaPredicted RBP8.4□□□□□ -1.07
SOX6-201ENST00000316399 INCENPQ9NQS7 918 aa8.4□□□□□ -1.07
SOX6-201ENST00000316399 DESP17661 470 aa8.4□□□□□ -1.07
SOX6-201ENST00000316399 EDC4Q6P2E9 1401 aaKnown RBP8.39□□□□□ -1.07
SOX6-201ENST00000316399 RAB3GAP1Q15042 981 aa8.39□□□□□ -1.07
SOX6-201ENST00000316399 FKBP15Q5T1M5 1219 aa8.39□□□□□ -1.07
SOX6-201ENST00000316399 FMNL3Q8IVF7 1028 aa8.39□□□□□ -1.07
SOX6-201ENST00000316399 ALS2CR12Q96Q35 445 aa8.39□□□□□ -1.07
SOX6-201ENST00000316399 KRT18P05783 430 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms