RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PAPPAQ13219 1627 aa28.52■■■□□ 2.16
IRF3-201ENST00000309877 ANXA1P04083 346 aa28.51■■■□□ 2.16
IRF3-201ENST00000309877 SLC4A10Q6U841 1118 aa28.51■■■□□ 2.16
IRF3-201ENST00000309877 ASAP1Q9ULH1 1129 aa28.51■■■□□ 2.16
IRF3-201ENST00000309877 F6X3S4 739 aa28.51■■■□□ 2.15
IRF3-201ENST00000309877 ATG3Q9NT62 314 aa28.51■■■□□ 2.15
IRF3-201ENST00000309877 KCPQ6ZWJ8 1503 aa28.5■■■□□ 2.15
IRF3-201ENST00000309877 QTRT2Q9H974 415 aaKnown RBP28.5■■■□□ 2.15
IRF3-201ENST00000309877 ZBTB40Q9NUA8 1239 aa28.5■■■□□ 2.15
IRF3-201ENST00000309877 C5P01031 1676 aa28.5■■■□□ 2.15
IRF3-201ENST00000309877 ZBTB7BO15156 539 aaPredicted RBP28.49■■■□□ 2.15
IRF3-201ENST00000309877 CCT4P50991 539 aaKnown RBP28.49■■■□□ 2.15
IRF3-201ENST00000309877 PROSER3Q2NL68 480 aa28.49■■■□□ 2.15
IRF3-201ENST00000309877 ACSBG1Q96GR2 724 aa28.48■■■□□ 2.15
IRF3-201ENST00000309877 ITGB4P16144 1822 aa28.48■■■□□ 2.15
IRF3-201ENST00000309877 UBR2Q8IWV8 1755 aa28.48■■■□□ 2.15
IRF3-201ENST00000309877 GLI3P10071 1580 aa28.47■■■□□ 2.15
IRF3-201ENST00000309877 PDIA6Q15084 440 aa28.47■■■□□ 2.15
IRF3-201ENST00000309877 PCDHB15Q9Y5E8 787 aa28.47■■■□□ 2.15
IRF3-201ENST00000309877 DOT1LQ8TEK3 1739 aa28.46■■■□□ 2.15
IRF3-201ENST00000309877 CENPQQ7L2Z9 268 aaPredicted RBP28.46■■■□□ 2.15
IRF3-201ENST00000309877 RBM42Q9BTD8 480 aaKnown RBP28.45■■■□□ 2.15
IRF3-201ENST00000309877 MYL6BP14649 208 aa28.45■■■□□ 2.14
IRF3-201ENST00000309877 VSIG10Q8N0Z9 540 aa28.45■■■□□ 2.14
IRF3-201ENST00000309877 THSD7AQ9UPZ6 1657 aa28.44■■■□□ 2.14
IRF3-201ENST00000309877 TEX13AQ9BXU3 409 aaPredicted RBP28.44■■■□□ 2.14
IRF3-201ENST00000309877 KDM2BQ8NHM5 1336 aa28.43■■■□□ 2.14
IRF3-201ENST00000309877 ONECUT3O60422 494 aaPredicted RBP28.43■■■□□ 2.14
IRF3-201ENST00000309877 ERBB4Q15303 1308 aa28.43■■■□□ 2.14
IRF3-201ENST00000309877 PI4KAP2A4QPH2 592 aa28.42■■■□□ 2.14
IRF3-201ENST00000309877 DDX58O95786 925 aaKnown RBP28.42■■■□□ 2.14
IRF3-201ENST00000309877 PI4KAP1Q8N8J0 262 aa28.42■■■□□ 2.14
IRF3-201ENST00000309877 DNAAF4Q8WXU2 420 aa28.42■■■□□ 2.14
IRF3-201ENST00000309877 RWDD1Q9H446 243 aaPredicted RBP28.42■■■□□ 2.14
IRF3-201ENST00000309877 LAMB4A4D0S4 1761 aa28.41■■■□□ 2.14
IRF3-201ENST00000309877 KAT6BQ8WYB5 2073 aa28.41■■■□□ 2.14
IRF3-201ENST00000309877 IGHDP01880 384 aa28.41■■■□□ 2.14
IRF3-201ENST00000309877 AIMP1Q12904 312 aaKnown RBP28.41■■■□□ 2.14
IRF3-201ENST00000309877 PXDNLA1KZ92 1463 aa28.41■■■□□ 2.14
IRF3-201ENST00000309877 KSR2Q6VAB6 950 aa28.4■■■□□ 2.14
IRF3-201ENST00000309877 SEPT12Q8IYM1 358 aa28.4■■■□□ 2.14
IRF3-201ENST00000309877 PIP4K2AP48426 406 aaPredicted RBP28.38■■■□□ 2.13
IRF3-201ENST00000309877 FBXO41Q8TF61 875 aa28.38■■■□□ 2.13
IRF3-201ENST00000309877 XAGE3Q8WTP9 111 aa28.38■■■□□ 2.13
IRF3-201ENST00000309877 STARD3NLO95772 234 aa28.38■■■□□ 2.13
IRF3-201ENST00000309877 ZNF772Q68DY9 489 aaPredicted RBP28.38■■■□□ 2.13
IRF3-201ENST00000309877 COPS6Q7L5N1 327 aa28.38■■■□□ 2.13
IRF3-201ENST00000309877 ADCY9O60503 1353 aa28.37■■■□□ 2.13
IRF3-201ENST00000309877 DNAJC10Q8IXB1 793 aa28.37■■■□□ 2.13
IRF3-201ENST00000309877 SRCIN1Q9C0H9 1055 aa28.37■■■□□ 2.13
IRF3-201ENST00000309877 MAP3K2Q9Y2U5 619 aa28.37■■■□□ 2.13
IRF3-201ENST00000309877 KCNQ2O43526 872 aa28.36■■■□□ 2.13
IRF3-201ENST00000309877 A1BGP04217 495 aa28.36■■■□□ 2.13
IRF3-201ENST00000309877 C1orf115Q9H7X2 142 aa28.36■■■□□ 2.13
IRF3-201ENST00000309877 LRP10Q7Z4F1 713 aa28.35■■■□□ 2.13
IRF3-201ENST00000309877 MEIS3Q99687 375 aa28.35■■■□□ 2.13
IRF3-201ENST00000309877 NBPF26B4DH59 902 aa28.35■■■□□ 2.13
IRF3-201ENST00000309877 NBPF14Q5TI25 921 aa28.35■■■□□ 2.13
IRF3-201ENST00000309877 NBPF10Q6P3W6 841 aaKnown RBP28.35■■■□□ 2.13
IRF3-201ENST00000309877 RIC3Q7Z5B4 369 aa28.35■■■□□ 2.13
IRF3-201ENST00000309877 NBPF15Q8N660 670 aa28.35■■■□□ 2.13
IRF3-201ENST00000309877 SMARCC1Q92922 1105 aaPredicted RBP28.35■■■□□ 2.13
IRF3-201ENST00000309877 HDAC1Q13547 482 aaPredicted RBP28.34■■■□□ 2.13
IRF3-201ENST00000309877 BEND3Q5T5X7 828 aa28.33■■■□□ 2.13
IRF3-201ENST00000309877 GNAI3P08754 354 aa28.32■■■□□ 2.12
IRF3-201ENST00000309877 SLC4A9Q96Q91 983 aa28.32■■■□□ 2.12
IRF3-201ENST00000309877 ANKRD13DQ6ZTN6 518 aa28.32■■■□□ 2.12
IRF3-201ENST00000309877 ATP10DQ9P241 1426 aa28.31■■■□□ 2.12
IRF3-201ENST00000309877 FAM182BQ5T319 152 aa28.31■■■□□ 2.12
IRF3-201ENST00000309877 PALLDQ8WX93 1383 aa28.3■■■□□ 2.12
IRF3-201ENST00000309877 ALDH1L1O75891 902 aa28.29■■■□□ 2.12
IRF3-201ENST00000309877 CYP19A1P11511 503 aaPredicted RBP28.29■■■□□ 2.12
IRF3-201ENST00000309877 RBM6P78332 1123 aaKnown RBP28.29■■■□□ 2.12
IRF3-201ENST00000309877 NEXNQ0ZGT2 675 aa28.29■■■□□ 2.12
IRF3-201ENST00000309877 LOC102724428A0A0B4J2F2 783 aa28.28■■■□□ 2.12
IRF3-201ENST00000309877 GNAI2P04899 355 aa28.28■■■□□ 2.12
IRF3-201ENST00000309877 ATP6V1AP38606 617 aa28.28■■■□□ 2.12
IRF3-201ENST00000309877 SIK1P57059 783 aa28.28■■■□□ 2.12
IRF3-201ENST00000309877 N4BP2Q86UW6 1770 aaPredicted RBP28.27■■■□□ 2.12
IRF3-201ENST00000309877 LINS1Q8NG48 757 aa28.27■■■□□ 2.12
IRF3-201ENST00000309877 PLBD2Q8NHP8 589 aa28.27■■■□□ 2.12
IRF3-201ENST00000309877 USP44Q9H0E7 712 aa28.27■■■□□ 2.12
IRF3-201ENST00000309877 RPAP2Q8IXW5 612 aaPredicted RBP28.26■■■□□ 2.12
IRF3-201ENST00000309877 METTL22Q9BUU2 404 aaPredicted RBP28.26■■■□□ 2.12
IRF3-201ENST00000309877 UBTFL1P0CB47 393 aaPredicted RBP28.26■■■□□ 2.11
IRF3-201ENST00000309877 ZNF330Q9Y3S2 320 aaPredicted RBP28.25■■■□□ 2.11
IRF3-201ENST00000309877 TTLL7Q6ZT98 887 aa28.23■■■□□ 2.11
IRF3-201ENST00000309877 KRT27Q7Z3Y8 459 aa28.23■■■□□ 2.11
IRF3-201ENST00000309877 ANKRD44Q8N8A2 993 aa28.23■■■□□ 2.11
IRF3-201ENST00000309877 MYD88Q99836 296 aa28.23■■■□□ 2.11
IRF3-201ENST00000309877 CWF19L2Q2TBE0 894 aaKnown RBP28.23■■■□□ 2.11
IRF3-201ENST00000309877 CEP85Q6P2H3 762 aa28.23■■■□□ 2.11
IRF3-201ENST00000309877 SIRT2Q8IXJ6 389 aa28.23■■■□□ 2.11
IRF3-201ENST00000309877 PTF1AQ7RTS3 328 aa28.22■■■□□ 2.11
IRF3-201ENST00000309877 C9orf78Q9NZ63 289 aaPredicted RBP28.22■■■□□ 2.11
IRF3-201ENST00000309877 TJP1Q07157 1748 aa28.21■■■□□ 2.11
IRF3-201ENST00000309877 NHSQ6T4R5 1651 aa28.21■■■□□ 2.11
IRF3-201ENST00000309877 IGKV5-2P06315 115 aa28.19■■■□□ 2.1
IRF3-201ENST00000309877 KIF6Q6ZMV9 814 aa28.19■■■□□ 2.1
IRF3-201ENST00000309877 NPM2Q86SE8 214 aaKnown RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms