RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 TSPYL6Q8N831 410 aa16.71■□□□□ 0.27
APTX-201ENST00000309615 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
APTX-201ENST00000309615 A1BGP04217 495 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
APTX-201ENST00000309615 NBPF14Q5TI25 921 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 INTS5Q6P9B9 1019 aaKnown RBP16.69■□□□□ 0.26
APTX-201ENST00000309615 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
APTX-201ENST00000309615 CNTNAP4Q9C0A0 1308 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 HMGB2P26583 209 aaKnown RBP16.69■□□□□ 0.26
APTX-201ENST00000309615 SLC15A2Q16348 729 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
APTX-201ENST00000309615 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 AK7Q96M32 723 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 CCDC87Q9NVE4 849 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
APTX-201ENST00000309615 GNPATO15228 680 aa16.68■□□□□ 0.26
APTX-201ENST00000309615 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
APTX-201ENST00000309615 SMIM5Q71RC9 77 aa16.68■□□□□ 0.26
APTX-201ENST00000309615 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
APTX-201ENST00000309615 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
APTX-201ENST00000309615 ZBTB1Q9Y2K1 713 aa16.68■□□□□ 0.26
APTX-201ENST00000309615 HOXB7P09629 217 aa16.67■□□□□ 0.26
APTX-201ENST00000309615 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
APTX-201ENST00000309615 MYH14Q7Z406 1995 aaKnown RBP16.67■□□□□ 0.26
APTX-201ENST00000309615 TWISTNBQ3B726 338 aaPredicted RBP16.67■□□□□ 0.26
APTX-201ENST00000309615 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
APTX-201ENST00000309615 CANXP27824 592 aaKnown RBP16.66■□□□□ 0.26
APTX-201ENST00000309615 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
APTX-201ENST00000309615 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
APTX-201ENST00000309615 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
APTX-201ENST00000309615 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
APTX-201ENST00000309615 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
APTX-201ENST00000309615 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
APTX-201ENST00000309615 PHF14O94880 888 aa16.65■□□□□ 0.26
APTX-201ENST00000309615 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
APTX-201ENST00000309615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
APTX-201ENST00000309615 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
APTX-201ENST00000309615 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
APTX-201ENST00000309615 PSDA5PKW4 1024 aaPredicted RBP16.63■□□□□ 0.25
APTX-201ENST00000309615 VAMP4O75379 141 aa16.63■□□□□ 0.25
APTX-201ENST00000309615 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
APTX-201ENST00000309615 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
APTX-201ENST00000309615 PDIA6Q15084 440 aa16.63■□□□□ 0.25
APTX-201ENST00000309615 PROSER3Q2NL68 480 aa16.63■□□□□ 0.25
APTX-201ENST00000309615 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
APTX-201ENST00000309615 CHPF2Q9P2E5 772 aa16.63■□□□□ 0.25
APTX-201ENST00000309615 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
APTX-201ENST00000309615 ANXA1P04083 346 aa16.62■□□□□ 0.25
APTX-201ENST00000309615 MYL6BP14649 208 aa16.62■□□□□ 0.25
APTX-201ENST00000309615 SSFA2P28290 1259 aa16.62■□□□□ 0.25
APTX-201ENST00000309615 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
APTX-201ENST00000309615 COL23A1Q86Y22 540 aaPredicted RBP16.62■□□□□ 0.25
APTX-201ENST00000309615 TCERG1O14776 1098 aaKnown RBP16.61■□□□□ 0.25
APTX-201ENST00000309615 IL6STP40189 918 aaPredicted RBP16.61■□□□□ 0.25
APTX-201ENST00000309615 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
APTX-201ENST00000309615 TRAPPC3LQ5T215 181 aa16.61■□□□□ 0.25
APTX-201ENST00000309615 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
APTX-201ENST00000309615 ARHGEF1Q92888 912 aaKnown RBP16.61■□□□□ 0.25
APTX-201ENST00000309615 COL15A1P39059 1388 aa16.6■□□□□ 0.25
APTX-201ENST00000309615 ADRA2BP18089 450 aa16.6■□□□□ 0.25
APTX-201ENST00000309615 DDX21Q9NR30 783 aaKnown RBP eCLIP16.6■□□□□ 0.25
APTX-201ENST00000309615 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
APTX-201ENST00000309615 MSH5O43196 834 aa16.59■□□□□ 0.25
APTX-201ENST00000309615 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
APTX-201ENST00000309615 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
APTX-201ENST00000309615 QSER1Q2KHR3 1735 aa16.58■□□□□ 0.24
APTX-201ENST00000309615 RFC4P35249 363 aa16.58■□□□□ 0.24
APTX-201ENST00000309615 ARXQ96QS3 562 aa16.58■□□□□ 0.24
APTX-201ENST00000309615 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
APTX-201ENST00000309615 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
APTX-201ENST00000309615 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
APTX-201ENST00000309615 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
APTX-201ENST00000309615 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
APTX-201ENST00000309615 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
APTX-201ENST00000309615 A0A087WZG4 1122 aa16.56■□□□□ 0.24
APTX-201ENST00000309615 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
APTX-201ENST00000309615 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
APTX-201ENST00000309615 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
APTX-201ENST00000309615 HYPKQ9NX55 129 aa16.56■□□□□ 0.24
APTX-201ENST00000309615 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
APTX-201ENST00000309615 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
APTX-201ENST00000309615 AIMP1Q12904 312 aaKnown RBP16.55■□□□□ 0.24
APTX-201ENST00000309615 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
APTX-201ENST00000309615 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
APTX-201ENST00000309615 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
APTX-201ENST00000309615 CASZ1Q86V15 1759 aa16.55■□□□□ 0.24
APTX-201ENST00000309615 ZPR1O75312 459 aa16.54■□□□□ 0.24
APTX-201ENST00000309615 NARFQ9UHQ1 456 aa16.54■□□□□ 0.24
APTX-201ENST00000309615 ZBTB7AO95365 584 aa16.54■□□□□ 0.24
APTX-201ENST00000309615 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
APTX-201ENST00000309615 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
APTX-201ENST00000309615 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
APTX-201ENST00000309615 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
APTX-201ENST00000309615 G2E3Q7L622 706 aa16.53■□□□□ 0.24
APTX-201ENST00000309615 ZNF428Q96B54 188 aa16.53■□□□□ 0.24
APTX-201ENST00000309615 GYS1P13807 737 aa16.52■□□□□ 0.24
APTX-201ENST00000309615 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
APTX-201ENST00000309615 KIF6Q6ZMV9 814 aa16.52■□□□□ 0.24
APTX-201ENST00000309615 BCL2L12Q9HB09 334 aa16.52■□□□□ 0.24
APTX-201ENST00000309615 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms