RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MSL1Q68DK7 614 aa25.86■■□□□ 1.73
VEGFB-201ENST00000309422 ZNF330Q9Y3S2 320 aaPredicted RBP25.86■■□□□ 1.73
VEGFB-201ENST00000309422 UBR3Q6ZT12 1888 aa25.86■■□□□ 1.73
VEGFB-201ENST00000309422 A0A087WZG4 1122 aa25.85■■□□□ 1.73
VEGFB-201ENST00000309422 ZPR1O75312 459 aa25.85■■□□□ 1.73
VEGFB-201ENST00000309422 CANXP27824 592 aaKnown RBP25.85■■□□□ 1.73
VEGFB-201ENST00000309422 ARXQ96QS3 562 aa25.85■■□□□ 1.73
VEGFB-201ENST00000309422 ZBTB1Q9Y2K1 713 aa25.85■■□□□ 1.73
VEGFB-201ENST00000309422 TRIM35Q9UPQ4 493 aa25.84■■□□□ 1.73
VEGFB-201ENST00000309422 SOS1Q07889 1333 aaPredicted RBP25.84■■□□□ 1.73
VEGFB-201ENST00000309422 COL15A1P39059 1388 aa25.84■■□□□ 1.73
VEGFB-201ENST00000309422 INTS5Q6P9B9 1019 aaKnown RBP25.83■■□□□ 1.73
VEGFB-201ENST00000309422 KLHL34Q8N239 644 aa25.83■■□□□ 1.73
VEGFB-201ENST00000309422 ARHGEF1Q92888 912 aaKnown RBP25.83■■□□□ 1.73
VEGFB-201ENST00000309422 CCER2I3L3R5 266 aa25.82■■□□□ 1.72
VEGFB-201ENST00000309422 PTGER2P43116 358 aa25.82■■□□□ 1.72
VEGFB-201ENST00000309422 NLGN1Q8N2Q7 840 aa25.82■■□□□ 1.72
VEGFB-201ENST00000309422 AMIGO3Q86WK7 504 aa25.82■■□□□ 1.72
VEGFB-201ENST00000309422 EIF4A1P60842 406 aaKnown RBP25.81■■□□□ 1.72
VEGFB-201ENST00000309422 SMIM5Q71RC9 77 aa25.81■■□□□ 1.72
VEGFB-201ENST00000309422 SRCAPQ6ZRS2 3230 aa25.8■■□□□ 1.72
VEGFB-201ENST00000309422 KDM3BQ7LBC6 1761 aa25.8■■□□□ 1.72
VEGFB-201ENST00000309422 DCAF8L1A6NGE4 600 aa25.8■■□□□ 1.72
VEGFB-201ENST00000309422 IL6STP40189 918 aaPredicted RBP25.8■■□□□ 1.72
VEGFB-201ENST00000309422 GNAI1P63096 354 aa25.8■■□□□ 1.72
VEGFB-201ENST00000309422 CFAP44Q96MT7 982 aa25.79■■□□□ 1.72
VEGFB-201ENST00000309422 IFT57Q9NWB7 429 aa25.79■■□□□ 1.72
VEGFB-201ENST00000309422 USP42Q9H9J4 1324 aaKnown RBP25.79■■□□□ 1.72
VEGFB-201ENST00000309422 CCDC27Q2M243 656 aa25.78■■□□□ 1.72
VEGFB-201ENST00000309422 NGEFQ8N5V2 710 aa25.78■■□□□ 1.72
VEGFB-201ENST00000309422 GIGYF1O75420 1035 aaPredicted RBP25.77■■□□□ 1.72
VEGFB-201ENST00000309422 NCBP3Q53F19 620 aaKnown RBP25.77■■□□□ 1.72
VEGFB-201ENST00000309422 SGIP1Q9BQI5 828 aa25.77■■□□□ 1.72
VEGFB-201ENST00000309422 USP16Q9Y5T5 823 aa25.76■■□□□ 1.71
VEGFB-201ENST00000309422 CHL1O00533 1208 aa25.75■■□□□ 1.71
VEGFB-201ENST00000309422 A1BGP04217 495 aa25.75■■□□□ 1.71
VEGFB-201ENST00000309422 NARFQ9UHQ1 456 aa25.75■■□□□ 1.71
VEGFB-201ENST00000309422 PARP3Q9Y6F1 533 aa25.75■■□□□ 1.71
VEGFB-201ENST00000309422 EIF5P55010 431 aaKnown RBP25.74■■□□□ 1.71
VEGFB-201ENST00000309422 PRAMEF22A3QJZ6 481 aa25.73■■□□□ 1.71
VEGFB-201ENST00000309422 MMP10P09238 476 aa25.73■■□□□ 1.71
VEGFB-201ENST00000309422 GYS1P13807 737 aa25.73■■□□□ 1.71
VEGFB-201ENST00000309422 CHMP4AQ9BY43 222 aa25.73■■□□□ 1.71
VEGFB-201ENST00000309422 FHDC1Q9C0D6 1143 aaPredicted RBP25.73■■□□□ 1.71
VEGFB-201ENST00000309422 LAMB4A4D0S4 1761 aa25.73■■□□□ 1.71
VEGFB-201ENST00000309422 ERBB4Q15303 1308 aa25.72■■□□□ 1.71
VEGFB-201ENST00000309422 USPL1Q5W0Q7 1092 aa25.72■■□□□ 1.71
VEGFB-201ENST00000309422 SRP68Q9UHB9 627 aaKnown RBP25.72■■□□□ 1.71
VEGFB-201ENST00000309422 ZNF652Q9Y2D9 606 aa25.72■■□□□ 1.71
VEGFB-201ENST00000309422 SALL2Q9Y467 1007 aaPredicted RBP25.72■■□□□ 1.71
VEGFB-201ENST00000309422 MYH14Q7Z406 1995 aaKnown RBP25.72■■□□□ 1.71
VEGFB-201ENST00000309422 C4AP0C0L4 1744 aa25.72■■□□□ 1.71
VEGFB-201ENST00000309422 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
VEGFB-201ENST00000309422 EIF2S2P20042 333 aaKnown RBP25.7■■□□□ 1.71
VEGFB-201ENST00000309422 DZIP3Q86Y13 1208 aaKnown RBP25.7■■□□□ 1.71
VEGFB-201ENST00000309422 MBIPQ9NS73 344 aa25.7■■□□□ 1.71
VEGFB-201ENST00000309422 SENP3-EIF4A1A0A087X0R7 540 aa25.69■■□□□ 1.7
VEGFB-201ENST00000309422 HOXB7P09629 217 aa25.69■■□□□ 1.7
VEGFB-201ENST00000309422 KIF6Q6ZMV9 814 aa25.69■■□□□ 1.7
VEGFB-201ENST00000309422 IL16Q14005 1332 aa25.68■■□□□ 1.7
VEGFB-201ENST00000309422 TBC1D2BQ9UPU7 963 aa25.68■■□□□ 1.7
VEGFB-201ENST00000309422 COL24A1Q17RW2 1714 aa25.67■■□□□ 1.7
VEGFB-201ENST00000309422 NPHP1O15259 732 aa25.67■■□□□ 1.7
VEGFB-201ENST00000309422 PIP4K2AP48426 406 aaPredicted RBP25.67■■□□□ 1.7
VEGFB-201ENST00000309422 FKBP8Q14318 412 aa25.67■■□□□ 1.7
VEGFB-201ENST00000309422 HDGFL1Q5TGJ6 251 aa25.67■■□□□ 1.7
VEGFB-201ENST00000309422 SYT17Q9BSW7 474 aa25.67■■□□□ 1.7
VEGFB-201ENST00000309422 CD2APQ9Y5K6 639 aa25.67■■□□□ 1.7
VEGFB-201ENST00000309422 MYL6BP14649 208 aa25.66■■□□□ 1.7
VEGFB-201ENST00000309422 WDR63Q8IWG1 891 aa25.66■■□□□ 1.7
VEGFB-201ENST00000309422 ZNF853P0CG23 659 aa25.65■■□□□ 1.7
VEGFB-201ENST00000309422 DUSP27Q5VZP5 1158 aa25.63■■□□□ 1.69
VEGFB-201ENST00000309422 SCN7AQ01118 1682 aa25.62■■□□□ 1.69
VEGFB-201ENST00000309422 NBPF26B4DH59 902 aa25.62■■□□□ 1.69
VEGFB-201ENST00000309422 NBPF10Q6P3W6 841 aaKnown RBP25.62■■□□□ 1.69
VEGFB-201ENST00000309422 BICDL1Q6ZP65 573 aa25.62■■□□□ 1.69
VEGFB-201ENST00000309422 NBPF15Q8N660 670 aa25.62■■□□□ 1.69
VEGFB-201ENST00000309422 NECTIN2Q92692 538 aa25.62■■□□□ 1.69
VEGFB-201ENST00000309422 MYH16Q9H6N6 1097 aa25.62■■□□□ 1.69
VEGFB-201ENST00000309422 RGL2O15211 777 aa25.61■■□□□ 1.69
VEGFB-201ENST00000309422 SETDB2Q96T68 719 aa25.61■■□□□ 1.69
VEGFB-201ENST00000309422 CARMIL3Q8ND23 1372 aa25.61■■□□□ 1.69
VEGFB-201ENST00000309422 CAMTA2O94983 1202 aa25.6■■□□□ 1.69
VEGFB-201ENST00000309422 CLEC4GQ6UXB4 293 aa25.6■■□□□ 1.69
VEGFB-201ENST00000309422 MIER1Q8N108 512 aa25.6■■□□□ 1.69
VEGFB-201ENST00000309422 NFIXQ14938 502 aa25.59■■□□□ 1.69
VEGFB-201ENST00000309422 KRT24Q2M2I5 525 aa25.59■■□□□ 1.69
VEGFB-201ENST00000309422 DBF4Q9UBU7 674 aaPredicted RBP25.59■■□□□ 1.69
VEGFB-201ENST00000309422 GOLGA2Q08379 1002 aa25.58■■□□□ 1.69
VEGFB-201ENST00000309422 TSR2Q969E8 191 aaKnown RBP25.58■■□□□ 1.69
VEGFB-201ENST00000309422 PELP1Q8IZL8 1130 aaKnown RBP25.57■■□□□ 1.68
VEGFB-201ENST00000309422 DDX21Q9NR30 783 aaKnown RBP eCLIP25.57■■□□□ 1.68
VEGFB-201ENST00000309422 POLRMTO00411 1230 aaKnown RBP25.56■■□□□ 1.68
VEGFB-201ENST00000309422 ELL2O00472 640 aaPredicted RBP25.56■■□□□ 1.68
VEGFB-201ENST00000309422 DDR1Q08345 913 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 MAP3K15Q6ZN16 1313 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 C10orf71Q711Q0 1435 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 ERVV-1B6SEH8 477 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 TM4SF1P30408 202 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 CCDC30Q5VVM6 783 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms