RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 SRGAP3O43295 1099 aa25.38■■□□□ 1.65
RELA-201ENST00000308639 SSH3Q8TE77 659 aa25.38■■□□□ 1.65
RELA-201ENST00000308639 LARP6Q9BRS8 491 aaKnown RBP25.38■■□□□ 1.65
RELA-201ENST00000308639 SRCIN1Q9C0H9 1055 aa25.38■■□□□ 1.65
RELA-201ENST00000308639 TMEM63CQ9P1W3 806 aa25.38■■□□□ 1.65
RELA-201ENST00000308639 PI4KAP2A4QPH2 592 aa25.37■■□□□ 1.65
RELA-201ENST00000308639 ZNF445P59923 1031 aa25.37■■□□□ 1.65
RELA-201ENST00000308639 PI4KAP1Q8N8J0 262 aa25.37■■□□□ 1.65
RELA-201ENST00000308639 DTNBO60941 627 aa25.37■■□□□ 1.65
RELA-201ENST00000308639 MCCP23508 829 aa25.36■■□□□ 1.65
RELA-201ENST00000308639 EIF4A1P60842 406 aaKnown RBP25.36■■□□□ 1.65
RELA-201ENST00000308639 RHPN1Q8TCX5 695 aa25.36■■□□□ 1.65
RELA-201ENST00000308639 MPRIPQ6WCQ1 1025 aa25.35■■□□□ 1.65
RELA-201ENST00000308639 PHF8Q9UPP1 1060 aa25.35■■□□□ 1.65
RELA-201ENST00000308639 GDPD2Q9HCC8 539 aa25.34■■□□□ 1.65
RELA-201ENST00000308639 SYCE3A1L190 88 aa25.34■■□□□ 1.65
RELA-201ENST00000308639 XPCQ01831 940 aaPredicted RBP25.34■■□□□ 1.65
RELA-201ENST00000308639 CCDC173Q0VFZ6 552 aa25.34■■□□□ 1.65
RELA-201ENST00000308639 PI4K2BQ8TCG2 481 aa25.34■■□□□ 1.65
RELA-201ENST00000308639 PPP1R9BQ96SB3 815 aa25.33■■□□□ 1.65
RELA-201ENST00000308639 ANKARQ7Z5J8 1434 aa25.33■■□□□ 1.65
RELA-201ENST00000308639 CACNA1FO60840 1977 aa25.33■■□□□ 1.64
RELA-201ENST00000308639 LTN1O94822 1766 aa25.33■■□□□ 1.64
RELA-201ENST00000308639 CUL4AQ13619 759 aa25.32■■□□□ 1.64
RELA-201ENST00000308639 BRD1O95696 1058 aa25.32■■□□□ 1.64
RELA-201ENST00000308639 POLA2Q14181 598 aa25.32■■□□□ 1.64
RELA-201ENST00000308639 TPRNQ4KMQ1 711 aa25.32■■□□□ 1.64
RELA-201ENST00000308639 BEND3Q5T5X7 828 aa25.31■■□□□ 1.64
RELA-201ENST00000308639 IP6K1Q92551 441 aa25.31■■□□□ 1.64
RELA-201ENST00000308639 CEMIPQ8WUJ3 1361 aa25.31■■□□□ 1.64
RELA-201ENST00000308639 DNAAF4Q8WXU2 420 aa25.31■■□□□ 1.64
RELA-201ENST00000308639 PRAMEF22A3QJZ6 481 aa25.3■■□□□ 1.64
RELA-201ENST00000308639 RGPD2P0DJD1 1756 aa25.3■■□□□ 1.64
RELA-201ENST00000308639 PXDNLA1KZ92 1463 aa25.3■■□□□ 1.64
RELA-201ENST00000308639 ZNF530Q6P9A1 599 aaPredicted RBP25.3■■□□□ 1.64
RELA-201ENST00000308639 CPA1P15085 419 aa25.29■■□□□ 1.64
RELA-201ENST00000308639 PROSER3Q2NL68 480 aa25.29■■□□□ 1.64
RELA-201ENST00000308639 ESCO1Q5FWF5 840 aa25.29■■□□□ 1.64
RELA-201ENST00000308639 SPG7Q9UQ90 795 aa25.29■■□□□ 1.64
RELA-201ENST00000308639 BTBD11A6QL63 1104 aa25.29■■□□□ 1.64
RELA-201ENST00000308639 ANAPC15P60006 121 aa25.29■■□□□ 1.64
RELA-201ENST00000308639 CWC27Q6UX04 472 aaKnown RBP25.29■■□□□ 1.64
RELA-201ENST00000308639 ANP32BQ92688 251 aaKnown RBP25.29■■□□□ 1.64
RELA-201ENST00000308639 FER1L4A9Z1Z3 1794 aa25.28■■□□□ 1.64
RELA-201ENST00000308639 HSPA4P34932 840 aa25.28■■□□□ 1.64
RELA-201ENST00000308639 MCM2P49736 904 aa25.28■■□□□ 1.64
RELA-201ENST00000308639 TEFQ10587 303 aa25.28■■□□□ 1.64
RELA-201ENST00000308639 HSP90AA2PQ14568 343 aaPredicted RBP25.28■■□□□ 1.64
RELA-201ENST00000308639 RASEFQ8IZ41 740 aa25.28■■□□□ 1.64
RELA-201ENST00000308639 BABAM1Q9NWV8 329 aa25.28■■□□□ 1.64
RELA-201ENST00000308639 RNF214Q8ND24 703 aa25.27■■□□□ 1.64
RELA-201ENST00000308639 ADCY9O60503 1353 aa25.27■■□□□ 1.64
RELA-201ENST00000308639 N4BP2Q86UW6 1770 aaPredicted RBP25.27■■□□□ 1.64
RELA-201ENST00000308639 PSME1Q06323 249 aa25.27■■□□□ 1.64
RELA-201ENST00000308639 PA2G4Q9UQ80 394 aaKnown RBP25.27■■□□□ 1.64
RELA-201ENST00000308639 KIF1BPQ96EK5 621 aa25.26■■□□□ 1.63
RELA-201ENST00000308639 RAB11FIP3O75154 756 aa25.26■■□□□ 1.63
RELA-201ENST00000308639 GADD45BO75293 160 aaPredicted RBP25.26■■□□□ 1.63
RELA-201ENST00000308639 OS9Q13438 667 aaPredicted RBP25.26■■□□□ 1.63
RELA-201ENST00000308639 SGSM2O43147 1006 aa25.25■■□□□ 1.63
RELA-201ENST00000308639 RRP9O43818 475 aaKnown RBP25.25■■□□□ 1.63
RELA-201ENST00000308639 LMOD2Q6P5Q4 547 aa25.25■■□□□ 1.63
RELA-201ENST00000308639 SNX14Q9Y5W7 946 aa25.25■■□□□ 1.63
RELA-201ENST00000308639 AOX1Q06278 1338 aa25.24■■□□□ 1.63
RELA-201ENST00000308639 CWF19L2Q2TBE0 894 aaKnown RBP25.24■■□□□ 1.63
RELA-201ENST00000308639 DDX54Q8TDD1 881 aaKnown RBP25.23■■□□□ 1.63
RELA-201ENST00000308639 LSG1Q9H089 658 aaKnown RBP25.23■■□□□ 1.63
RELA-201ENST00000308639 PXDNQ92626 1479 aa25.23■■□□□ 1.63
RELA-201ENST00000308639 MAP3K2Q9Y2U5 619 aa25.23■■□□□ 1.63
RELA-201ENST00000308639 RAD50Q92878 1312 aa25.23■■□□□ 1.63
RELA-201ENST00000308639 LRSAM1Q6UWE0 723 aa25.22■■□□□ 1.63
RELA-201ENST00000308639 INTS4Q96HW7 963 aaKnown RBP25.22■■□□□ 1.63
RELA-201ENST00000308639 NFAT5O94916 1531 aa25.22■■□□□ 1.63
RELA-201ENST00000308639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.22■■□□□ 1.63
RELA-201ENST00000308639 TCHHQ07283 1943 aa25.21■■□□□ 1.63
RELA-201ENST00000308639 ZSCAN30Q86W11 494 aa25.21■■□□□ 1.63
RELA-201ENST00000308639 CNTROBQ8N137 903 aa25.21■■□□□ 1.63
RELA-201ENST00000308639 AK2P54819 239 aa25.2■■□□□ 1.63
RELA-201ENST00000308639 ORAI2Q96SN7 254 aa25.2■■□□□ 1.62
RELA-201ENST00000308639 MED1Q15648 1581 aaPredicted RBP25.2■■□□□ 1.62
RELA-201ENST00000308639 AKAP4Q5JQC9 854 aa25.19■■□□□ 1.62
RELA-201ENST00000308639 C9orf78Q9NZ63 289 aaPredicted RBP25.19■■□□□ 1.62
RELA-201ENST00000308639 USP54Q70EL1 1684 aa25.19■■□□□ 1.62
RELA-201ENST00000308639 LARGE1O95461 756 aa25.19■■□□□ 1.62
RELA-201ENST00000308639 PTH1RQ03431 593 aa25.19■■□□□ 1.62
RELA-201ENST00000308639 KDM3BQ7LBC6 1761 aa25.18■■□□□ 1.62
RELA-201ENST00000308639 RPAP1Q9BWH6 1393 aaPredicted RBP25.18■■□□□ 1.62
RELA-201ENST00000308639 RNMTO43148 476 aaKnown RBP25.18■■□□□ 1.62
RELA-201ENST00000308639 RUFY3Q7L099 469 aa25.18■■□□□ 1.62
RELA-201ENST00000308639 USP48Q86UV5 1035 aa25.18■■□□□ 1.62
RELA-201ENST00000308639 AIMP1Q12904 312 aaKnown RBP25.18■■□□□ 1.62
RELA-201ENST00000308639 IL17RAQ96F46 866 aa25.18■■□□□ 1.62
RELA-201ENST00000308639 TTC14Q96N46 770 aa25.17■■□□□ 1.62
RELA-201ENST00000308639 ADCK5Q3MIX3 580 aa25.16■■□□□ 1.62
RELA-201ENST00000308639 PLEKHO1Q53GL0 409 aaPredicted RBP25.16■■□□□ 1.62
RELA-201ENST00000308639 DBF4Q9UBU7 674 aaPredicted RBP25.16■■□□□ 1.62
RELA-201ENST00000308639 MBD3O95983 291 aa25.16■■□□□ 1.62
RELA-201ENST00000308639 GIGYF1O75420 1035 aaPredicted RBP25.15■■□□□ 1.62
RELA-201ENST00000308639 GCP02774 474 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 CASTP20810 708 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms